RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 ZNF496Q96IT1 587 aaPredicted RBP19■□□□□ 0.63
COL25A1-201ENST00000399126 COL14A1Q05707 1796 aaKnown RBP19■□□□□ 0.63
COL25A1-201ENST00000399126 PLEKHG2Q9H7P9 1386 aa19■□□□□ 0.63
COL25A1-201ENST00000399126 CCT4P50991 539 aaKnown RBP18.99■□□□□ 0.63
COL25A1-201ENST00000399126 CABP4P57796 275 aa18.99■□□□□ 0.63
COL25A1-201ENST00000399126 FAM161AQ3B820 660 aa18.98■□□□□ 0.63
COL25A1-201ENST00000399126 LNPKQ9C0E8 428 aa18.98■□□□□ 0.63
COL25A1-201ENST00000399126 CEP85Q6P2H3 762 aa18.98■□□□□ 0.63
COL25A1-201ENST00000399126 PI4KAP2A4QPH2 592 aa18.97■□□□□ 0.63
COL25A1-201ENST00000399126 HSP90AB1P08238 724 aaKnown RBP18.97■□□□□ 0.63
COL25A1-201ENST00000399126 PI4KAP1Q8N8J0 262 aa18.97■□□□□ 0.63
COL25A1-201ENST00000399126 N4BP2Q86UW6 1770 aaPredicted RBP18.97■□□□□ 0.63
COL25A1-201ENST00000399126 NUCB1Q02818 461 aa18.97■□□□□ 0.63
COL25A1-201ENST00000399126 IL27Q8NEV9 243 aa18.97■□□□□ 0.63
COL25A1-201ENST00000399126 DBF4Q9UBU7 674 aaPredicted RBP18.97■□□□□ 0.63
COL25A1-201ENST00000399126 NUTM2BA6NNL0 878 aaPredicted RBP18.96■□□□□ 0.63
COL25A1-201ENST00000399126 NUTM2EB1AL46 878 aaPredicted RBP18.96■□□□□ 0.63
COL25A1-201ENST00000399126 NUTM2AQ8IVF1 878 aaPredicted RBP18.96■□□□□ 0.63
COL25A1-201ENST00000399126 ADCY9O60503 1353 aa18.96■□□□□ 0.63
COL25A1-201ENST00000399126 TOM1O60784 492 aa18.96■□□□□ 0.63
COL25A1-201ENST00000399126 PIP4K2AP48426 406 aaPredicted RBP18.96■□□□□ 0.63
COL25A1-201ENST00000399126 ANKRD45Q5TZF3 282 aa18.95■□□□□ 0.62
COL25A1-201ENST00000399126 ANKRD44Q8N8A2 993 aa18.95■□□□□ 0.62
COL25A1-201ENST00000399126 KAT6BQ8WYB5 2073 aa18.95■□□□□ 0.62
COL25A1-201ENST00000399126 TOGARAM1Q9Y4F4 1720 aa18.95■□□□□ 0.62
COL25A1-201ENST00000399126 PDIA6Q15084 440 aa18.95■□□□□ 0.62
COL25A1-201ENST00000399126 TTC5Q8N0Z6 440 aa18.95■□□□□ 0.62
COL25A1-201ENST00000399126 USP16Q9Y5T5 823 aa18.95■□□□□ 0.62
COL25A1-201ENST00000399126 GLI3P10071 1580 aa18.95■□□□□ 0.62
COL25A1-201ENST00000399126 PLCH1Q4KWH8 1693 aa18.94■□□□□ 0.62
COL25A1-201ENST00000399126 UBAP1LF5GYI3 381 aa18.94■□□□□ 0.62
COL25A1-201ENST00000399126 PAXIP1Q6ZW49 1069 aaPredicted RBP18.94■□□□□ 0.62
COL25A1-201ENST00000399126 CHD1LQ86WJ1 897 aa18.94■□□□□ 0.62
COL25A1-201ENST00000399126 GCC1Q96CN9 775 aa18.93■□□□□ 0.62
COL25A1-201ENST00000399126 PXDNLA1KZ92 1463 aa18.93■□□□□ 0.62
COL25A1-201ENST00000399126 DNAAF4Q8WXU2 420 aa18.93■□□□□ 0.62
COL25A1-201ENST00000399126 USP44Q9H0E7 712 aa18.93■□□□□ 0.62
COL25A1-201ENST00000399126 MYL6BP14649 208 aa18.92■□□□□ 0.62
COL25A1-201ENST00000399126 AIMP1Q12904 312 aaKnown RBP18.92■□□□□ 0.62
COL25A1-201ENST00000399126 NKX1-1Q15270 411 aaPredicted RBP18.92■□□□□ 0.62
COL25A1-201ENST00000399126 RPAP2Q8IXW5 612 aaPredicted RBP18.91■□□□□ 0.62
COL25A1-201ENST00000399126 DISP2A7MBM2 1401 aa18.91■□□□□ 0.62
COL25A1-201ENST00000399126 SEC24BO95487 1268 aa18.91■□□□□ 0.62
COL25A1-201ENST00000399126 BEND3Q5T5X7 828 aa18.91■□□□□ 0.62
COL25A1-201ENST00000399126 FMNL2Q96PY5 1086 aa18.91■□□□□ 0.62
COL25A1-201ENST00000399126 DDX21Q9NR30 783 aaKnown RBP eCLIP18.91■□□□□ 0.62
COL25A1-201ENST00000399126 APBB1O00213 710 aa18.9■□□□□ 0.62
COL25A1-201ENST00000399126 GNAI2P04899 355 aa18.9■□□□□ 0.62
COL25A1-201ENST00000399126 SRCIN1Q9C0H9 1055 aa18.9■□□□□ 0.62
COL25A1-201ENST00000399126 DCTPP1Q9H773 170 aa18.9■□□□□ 0.62
COL25A1-201ENST00000399126 MAP3K2Q9Y2U5 619 aa18.9■□□□□ 0.62
COL25A1-201ENST00000399126 LRRFIP2Q9Y608 721 aaKnown RBP18.9■□□□□ 0.62
COL25A1-201ENST00000399126 SNRPA1P09661 255 aaKnown RBP18.9■□□□□ 0.62
COL25A1-201ENST00000399126 ERVV-2B6SEH9 535 aa18.89■□□□□ 0.62
COL25A1-201ENST00000399126 PNMA6EA0A0J9YXQ4 647 aa18.88■□□□□ 0.61
COL25A1-201ENST00000399126 PTCD1O75127 700 aaKnown RBP18.88■□□□□ 0.61
COL25A1-201ENST00000399126 NBPF7P0C2Y1 421 aaPredicted RBP18.88■□□□□ 0.61
COL25A1-201ENST00000399126 HYPKQ9NX55 129 aa18.88■□□□□ 0.61
COL25A1-201ENST00000399126 NRAPQ86VF7 1730 aa18.88■□□□□ 0.61
COL25A1-201ENST00000399126 UBR2Q8IWV8 1755 aa18.88■□□□□ 0.61
COL25A1-201ENST00000399126 GNAI3P08754 354 aa18.87■□□□□ 0.61
COL25A1-201ENST00000399126 CWF19L2Q2TBE0 894 aaKnown RBP18.87■□□□□ 0.61
COL25A1-201ENST00000399126 SMARCA5O60264 1052 aaPredicted RBP18.87■□□□□ 0.61
COL25A1-201ENST00000399126 KSR2Q6VAB6 950 aa18.87■□□□□ 0.61
COL25A1-201ENST00000399126 KCPQ6ZWJ8 1503 aa18.87■□□□□ 0.61
COL25A1-201ENST00000399126 PAPPAQ13219 1627 aa18.87■□□□□ 0.61
COL25A1-201ENST00000399126 UBTFL1P0CB47 393 aaPredicted RBP18.87■□□□□ 0.61
COL25A1-201ENST00000399126 ANP32AP39687 249 aaKnown RBP18.87■□□□□ 0.61
COL25A1-201ENST00000399126 LRP10Q7Z4F1 713 aa18.87■□□□□ 0.61
COL25A1-201ENST00000399126 XAGE3Q8WTP9 111 aa18.87■□□□□ 0.61
COL25A1-201ENST00000399126 WNK3Q9BYP7 1800 aa18.86■□□□□ 0.61
COL25A1-201ENST00000399126 C16orf71Q8IYS4 520 aaPredicted RBP18.86■□□□□ 0.61
COL25A1-201ENST00000399126 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.86■□□□□ 0.61
COL25A1-201ENST00000399126 ITGB4P16144 1822 aa18.85■□□□□ 0.61
COL25A1-201ENST00000399126 LAMB4A4D0S4 1761 aa18.85■□□□□ 0.61
COL25A1-201ENST00000399126 COPS6Q7L5N1 327 aa18.85■□□□□ 0.61
COL25A1-201ENST00000399126 OTUD7AQ8TE49 926 aaPredicted RBP18.85■□□□□ 0.61
COL25A1-201ENST00000399126 EXOC6BQ9Y2D4 811 aa18.85■□□□□ 0.61
COL25A1-201ENST00000399126 TMOD3Q9NYL9 352 aa18.84■□□□□ 0.61
COL25A1-201ENST00000399126 PIGBQ92521 554 aa18.84■□□□□ 0.61
COL25A1-201ENST00000399126 ASAP1Q9ULH1 1129 aa18.84■□□□□ 0.61
COL25A1-201ENST00000399126 SPATA31A1Q5TZJ5 1347 aa18.83■□□□□ 0.61
COL25A1-201ENST00000399126 NBPF26B4DH59 902 aa18.82■□□□□ 0.6
COL25A1-201ENST00000399126 ATP8B2P98198 1209 aa18.82■□□□□ 0.6
COL25A1-201ENST00000399126 NBPF14Q5TI25 921 aa18.82■□□□□ 0.6
COL25A1-201ENST00000399126 NBPF10Q6P3W6 841 aaKnown RBP18.82■□□□□ 0.6
COL25A1-201ENST00000399126 NBPF15Q8N660 670 aa18.82■□□□□ 0.6
COL25A1-201ENST00000399126 TNS2Q63HR2 1409 aa18.82■□□□□ 0.6
COL25A1-201ENST00000399126 EXOC5O00471 708 aa18.82■□□□□ 0.6
COL25A1-201ENST00000399126 HMMRO75330 724 aa18.82■□□□□ 0.6
COL25A1-201ENST00000399126 GLIPR1L2Q4G1C9 344 aa18.82■□□□□ 0.6
COL25A1-201ENST00000399126 RIC3Q7Z5B4 369 aa18.82■□□□□ 0.6
COL25A1-201ENST00000399126 A1BGP04217 495 aa18.81■□□□□ 0.6
COL25A1-201ENST00000399126 IGKV5-2P06315 115 aa18.81■□□□□ 0.6
COL25A1-201ENST00000399126 CCDC9Q9Y3X0 531 aaKnown RBP18.81■□□□□ 0.6
COL25A1-201ENST00000399126 DDX58O95786 925 aaKnown RBP18.8■□□□□ 0.6
COL25A1-201ENST00000399126 SLIT2O94813 1529 aa18.8■□□□□ 0.6
COL25A1-201ENST00000399126 PPP1R42Q7Z4L9 355 aa18.8■□□□□ 0.6
COL25A1-201ENST00000399126 PLEKHM2Q8IWE5 1019 aa18.79■□□□□ 0.6
COL25A1-201ENST00000399126 SYTL4Q96C24 671 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms