RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 DCCP43146 1447 aa10.86□□□□□ -0.67
GIN1-201ENST00000399004 RBSNQ9H1K0 784 aa10.86□□□□□ -0.67
GIN1-201ENST00000399004 CICQ96RK0 1608 aaPredicted RBP10.86□□□□□ -0.67
GIN1-201ENST00000399004 HOXB7P09629 217 aa10.86□□□□□ -0.67
GIN1-201ENST00000399004 TTC22Q5TAA0 569 aa10.86□□□□□ -0.67
GIN1-201ENST00000399004 MIS18AQ9NYP9 233 aa10.86□□□□□ -0.67
GIN1-201ENST00000399004 MAP3K5Q99683 1374 aa10.85□□□□□ -0.67
GIN1-201ENST00000399004 RAB3GAP1Q15042 981 aa10.85□□□□□ -0.67
GIN1-201ENST00000399004 RRS1Q15050 365 aaKnown RBP10.85□□□□□ -0.67
GIN1-201ENST00000399004 ZSCAN30Q86W11 494 aa10.85□□□□□ -0.67
GIN1-201ENST00000399004 IGSF3O75054 1194 aa10.85□□□□□ -0.67
GIN1-201ENST00000399004 AEBP1Q8IUX7 1158 aa10.85□□□□□ -0.67
GIN1-201ENST00000399004 NSFL1CQ9UNZ2 370 aaKnown RBP10.85□□□□□ -0.67
GIN1-201ENST00000399004 WNK3Q9BYP7 1800 aa10.85□□□□□ -0.67
GIN1-201ENST00000399004 USP42Q9H9J4 1324 aaKnown RBP10.85□□□□□ -0.67
GIN1-201ENST00000399004 ZSCAN23Q3MJ62 389 aa10.84□□□□□ -0.67
GIN1-201ENST00000399004 TMEM94Q12767 1356 aa10.84□□□□□ -0.67
GIN1-201ENST00000399004 RILPL2Q969X0 211 aa10.84□□□□□ -0.67
GIN1-201ENST00000399004 UPF3BQ9BZI7 483 aaKnown RBP10.84□□□□□ -0.67
GIN1-201ENST00000399004 STAP2Q9UGK3 403 aa10.84□□□□□ -0.67
GIN1-201ENST00000399004 AMOTL2Q9Y2J4 779 aa10.84□□□□□ -0.67
GIN1-201ENST00000399004 TRIM6-TRIM34B2RNG4 842 aa10.84□□□□□ -0.67
GIN1-201ENST00000399004 MAP4K4O95819 1239 aaPredicted RBP10.84□□□□□ -0.67
GIN1-201ENST00000399004 TAOK2Q9UL54 1235 aa10.84□□□□□ -0.67
GIN1-201ENST00000399004 COL22A1Q8NFW1 1626 aaPredicted RBP10.84□□□□□ -0.67
GIN1-201ENST00000399004 MYH15Q9Y2K3 1946 aa10.83□□□□□ -0.68
GIN1-201ENST00000399004 CCDC173Q0VFZ6 552 aa10.83□□□□□ -0.68
GIN1-201ENST00000399004 COL15A1P39059 1388 aa10.83□□□□□ -0.68
GIN1-201ENST00000399004 NEK4P51957 841 aa10.83□□□□□ -0.68
GIN1-201ENST00000399004 MTHFSDQ2M296 383 aaKnown RBP10.83□□□□□ -0.68
GIN1-201ENST00000399004 THEMISQ8N1K5 641 aaPredicted RBP10.83□□□□□ -0.68
GIN1-201ENST00000399004 KLHL34Q8N239 644 aa10.83□□□□□ -0.68
GIN1-201ENST00000399004 DDX54Q8TDD1 881 aaKnown RBP10.83□□□□□ -0.68
GIN1-201ENST00000399004 HOXC9P31274 260 aa10.82□□□□□ -0.68
GIN1-201ENST00000399004 PLCH1Q4KWH8 1693 aa10.82□□□□□ -0.68
GIN1-201ENST00000399004 CDC45O75419 566 aa10.82□□□□□ -0.68
GIN1-201ENST00000399004 PTMSP20962 102 aa10.82□□□□□ -0.68
GIN1-201ENST00000399004 CCT4P50991 539 aaKnown RBP10.82□□□□□ -0.68
GIN1-201ENST00000399004 SKOR2Q2VWA4 1001 aaPredicted RBP10.82□□□□□ -0.68
GIN1-201ENST00000399004 HSP90AB2PQ58FF8 381 aa10.82□□□□□ -0.68
GIN1-201ENST00000399004 AFDNP55196 1824 aaKnown RBP10.82□□□□□ -0.68
GIN1-201ENST00000399004 SULT6B1Q6IMI4 303 aa10.82□□□□□ -0.68
GIN1-201ENST00000399004 SPEF2Q9C093 1822 aa10.81□□□□□ -0.68
GIN1-201ENST00000399004 EYA1Q99502 592 aa10.81□□□□□ -0.68
GIN1-201ENST00000399004 USP26Q9BXU7 913 aa10.81□□□□□ -0.68
GIN1-201ENST00000399004 ZBTB22O15209 634 aa10.81□□□□□ -0.68
GIN1-201ENST00000399004 F6X3S4 739 aa10.8□□□□□ -0.68
GIN1-201ENST00000399004 POLA2Q14181 598 aa10.8□□□□□ -0.68
GIN1-201ENST00000399004 EID1Q9Y6B2 187 aa10.8□□□□□ -0.68
GIN1-201ENST00000399004 ANO2Q9NQ90 1003 aa10.8□□□□□ -0.68
GIN1-201ENST00000399004 EXOC6BQ9Y2D4 811 aa10.8□□□□□ -0.68
GIN1-201ENST00000399004 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.8□□□□□ -0.68
GIN1-201ENST00000399004 PXDNQ92626 1479 aa10.79□□□□□ -0.68
GIN1-201ENST00000399004 TPM2P07951 284 aa10.79□□□□□ -0.68
GIN1-201ENST00000399004 CBX1P83916 185 aa10.79□□□□□ -0.68
GIN1-201ENST00000399004 SPC24Q8NBT2 197 aa10.79□□□□□ -0.68
GIN1-201ENST00000399004 UTYO14607 1347 aa10.79□□□□□ -0.68
GIN1-201ENST00000399004 JCADQ9P266 1359 aa10.79□□□□□ -0.68
GIN1-201ENST00000399004 MLECQ14165 292 aa10.79□□□□□ -0.68
GIN1-201ENST00000399004 TMEM63CQ9P1W3 806 aa10.79□□□□□ -0.68
GIN1-201ENST00000399004 ST18O60284 1047 aa10.78□□□□□ -0.68
GIN1-201ENST00000399004 KLHL40Q2TBA0 621 aa10.78□□□□□ -0.68
GIN1-201ENST00000399004 GPT2Q8TD30 523 aa10.78□□□□□ -0.68
GIN1-201ENST00000399004 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.78□□□□□ -0.68
GIN1-201ENST00000399004 NPHP4O75161 1426 aaPredicted RBP10.78□□□□□ -0.68
GIN1-201ENST00000399004 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
GIN1-201ENST00000399004 MTX1Q13505 466 aa10.78□□□□□ -0.68
GIN1-201ENST00000399004 MCM10Q7L590 875 aa10.78□□□□□ -0.68
GIN1-201ENST00000399004 IP6K1Q92551 441 aa10.78□□□□□ -0.68
GIN1-201ENST00000399004 TTC12Q9H892 705 aaPredicted RBP10.78□□□□□ -0.68
GIN1-201ENST00000399004 USP25Q9UHP3 1055 aa10.78□□□□□ -0.68
GIN1-201ENST00000399004 RABEP1Q15276 862 aa10.77□□□□□ -0.68
GIN1-201ENST00000399004 CASC1Q6TDU7 716 aa10.77□□□□□ -0.68
GIN1-201ENST00000399004 PDCL3Q9H2J4 239 aa10.77□□□□□ -0.68
GIN1-201ENST00000399004 SNRKQ9NRH2 765 aa10.77□□□□□ -0.68
GIN1-201ENST00000399004 NHSL1Q5SYE7 1610 aa10.77□□□□□ -0.68
GIN1-201ENST00000399004 RREB1Q92766 1687 aa10.77□□□□□ -0.69
GIN1-201ENST00000399004 SDSP20132 328 aa10.77□□□□□ -0.69
GIN1-201ENST00000399004 ATP8B2P98198 1209 aa10.76□□□□□ -0.69
GIN1-201ENST00000399004 SSH3Q8TE77 659 aa10.76□□□□□ -0.69
GIN1-201ENST00000399004 MEIS3Q99687 375 aa10.76□□□□□ -0.69
GIN1-201ENST00000399004 LMBRD1Q9NUN5 540 aa10.76□□□□□ -0.69
GIN1-201ENST00000399004 GNAT3A8MTJ3 354 aa10.76□□□□□ -0.69
GIN1-201ENST00000399004 FIBPO43427 364 aa10.76□□□□□ -0.69
GIN1-201ENST00000399004 IL17REQ8NFR9 667 aa10.76□□□□□ -0.69
GIN1-201ENST00000399004 KCNB2Q92953 911 aa10.76□□□□□ -0.69
GIN1-201ENST00000399004 TOGARAM1Q9Y4F4 1720 aa10.76□□□□□ -0.69
GIN1-201ENST00000399004 ANAPC15P60006 121 aa10.75□□□□□ -0.69
GIN1-201ENST00000399004 ARAP2Q8WZ64 1704 aa10.75□□□□□ -0.69
GIN1-201ENST00000399004 LAMA4Q16363 1823 aa10.75□□□□□ -0.69
GIN1-201ENST00000399004 ANKRD36CQ5JPF3 1778 aa10.75□□□□□ -0.69
GIN1-201ENST00000399004 OFD1O75665 1012 aa10.75□□□□□ -0.69
GIN1-201ENST00000399004 IL1RAPL2Q9NP60 686 aa10.75□□□□□ -0.69
GIN1-201ENST00000399004 GADD45BO75293 160 aaPredicted RBP10.75□□□□□ -0.69
GIN1-201ENST00000399004 CUL4AQ13619 759 aa10.75□□□□□ -0.69
GIN1-201ENST00000399004 ESF1Q9H501 851 aaKnown RBP10.75□□□□□ -0.69
GIN1-201ENST00000399004 LRP6O75581 1613 aa10.75□□□□□ -0.69
GIN1-201ENST00000399004 NUCB2P80303 420 aa10.74□□□□□ -0.69
GIN1-201ENST00000399004 KCNA6P17658 529 aa10.74□□□□□ -0.69
GIN1-201ENST00000399004 C1orf167Q5SNV9 1468 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms