RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 PIK3C2AO00443 1686 aa23.7■■□□□ 1.38
COL13A1-205ENST00000398978 CWC27Q6UX04 472 aaKnown RBP23.7■■□□□ 1.38
COL13A1-205ENST00000398978 STAP2Q9UGK3 403 aa23.7■■□□□ 1.38
COL13A1-205ENST00000398978 LRRC59Q96AG4 307 aaKnown RBP23.7■■□□□ 1.38
COL13A1-205ENST00000398978 CUL4AQ13619 759 aa23.69■■□□□ 1.38
COL13A1-205ENST00000398978 NBPF6Q5VWK0 638 aa23.69■■□□□ 1.38
COL13A1-205ENST00000398978 KIAA1211Q6ZU35 1233 aa23.69■■□□□ 1.38
COL13A1-205ENST00000398978 SSH3Q8TE77 659 aa23.69■■□□□ 1.38
COL13A1-205ENST00000398978 NBPF4Q96M43 638 aa23.69■■□□□ 1.38
COL13A1-205ENST00000398978 LRSAM1Q6UWE0 723 aa23.68■■□□□ 1.38
COL13A1-205ENST00000398978 RASEFQ8IZ41 740 aa23.68■■□□□ 1.38
COL13A1-205ENST00000398978 MPRIPQ6WCQ1 1025 aa23.68■■□□□ 1.38
COL13A1-205ENST00000398978 DIP2AQ14689 1571 aa23.68■■□□□ 1.38
COL13A1-205ENST00000398978 XPCQ01831 940 aaPredicted RBP23.68■■□□□ 1.38
COL13A1-205ENST00000398978 OS9Q13438 667 aaPredicted RBP23.68■■□□□ 1.38
COL13A1-205ENST00000398978 XRN1Q8IZH2 1706 aaKnown RBP23.67■■□□□ 1.38
COL13A1-205ENST00000398978 HTATSF1O43719 755 aaKnown RBP23.67■■□□□ 1.38
COL13A1-205ENST00000398978 PI4K2BQ8TCG2 481 aa23.67■■□□□ 1.38
COL13A1-205ENST00000398978 TBX22Q9Y458 520 aa23.66■■□□□ 1.38
COL13A1-205ENST00000398978 FAM208AQ9UK61 1670 aaKnown RBP23.66■■□□□ 1.38
COL13A1-205ENST00000398978 PA2G4Q9UQ80 394 aaKnown RBP23.65■■□□□ 1.38
COL13A1-205ENST00000398978 PRAMEF22A3QJZ6 481 aa23.65■■□□□ 1.38
COL13A1-205ENST00000398978 MCM2P49736 904 aa23.65■■□□□ 1.38
COL13A1-205ENST00000398978 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.65■■□□□ 1.38
COL13A1-205ENST00000398978 TCHHQ07283 1943 aa23.64■■□□□ 1.38
COL13A1-205ENST00000398978 HSPA4P34932 840 aa23.64■■□□□ 1.38
COL13A1-205ENST00000398978 USP48Q86UV5 1035 aa23.64■■□□□ 1.38
COL13A1-205ENST00000398978 EIF4A1P60842 406 aaKnown RBP23.64■■□□□ 1.37
COL13A1-205ENST00000398978 ANAPC15P60006 121 aa23.63■■□□□ 1.37
COL13A1-205ENST00000398978 SNX14Q9Y5W7 946 aa23.63■■□□□ 1.37
COL13A1-205ENST00000398978 NWD1Q149M9 1564 aa23.63■■□□□ 1.37
COL13A1-205ENST00000398978 HSP90AA2PQ14568 343 aaPredicted RBP23.63■■□□□ 1.37
COL13A1-205ENST00000398978 DNAAF4Q8WXU2 420 aa23.63■■□□□ 1.37
COL13A1-205ENST00000398978 CNPY2Q9Y2B0 182 aa23.62■■□□□ 1.37
COL13A1-205ENST00000398978 TUBGCP6Q96RT7 1819 aa23.62■■□□□ 1.37
COL13A1-205ENST00000398978 AK2P54819 239 aa23.62■■□□□ 1.37
COL13A1-205ENST00000398978 PROSER3Q2NL68 480 aa23.62■■□□□ 1.37
COL13A1-205ENST00000398978 BEND3Q5T5X7 828 aa23.62■■□□□ 1.37
COL13A1-205ENST00000398978 SGSM2O43147 1006 aa23.61■■□□□ 1.37
COL13A1-205ENST00000398978 POLA2Q14181 598 aa23.61■■□□□ 1.37
COL13A1-205ENST00000398978 LARGE1O95461 756 aa23.61■■□□□ 1.37
COL13A1-205ENST00000398978 LMOD2Q6P5Q4 547 aa23.61■■□□□ 1.37
COL13A1-205ENST00000398978 R3HCC1Q9Y3T6 440 aaKnown RBP23.61■■□□□ 1.37
COL13A1-205ENST00000398978 CWF19L2Q2TBE0 894 aaKnown RBP23.61■■□□□ 1.37
COL13A1-205ENST00000398978 KIF1BPQ96EK5 621 aa23.61■■□□□ 1.37
COL13A1-205ENST00000398978 PDLIM2Q96JY6 352 aa23.6■■□□□ 1.37
COL13A1-205ENST00000398978 KIF13AQ9H1H9 1805 aa23.6■■□□□ 1.37
COL13A1-205ENST00000398978 BTBD11A6QL63 1104 aa23.6■■□□□ 1.37
COL13A1-205ENST00000398978 UBE2Q2Q8WVN8 375 aa23.6■■□□□ 1.37
COL13A1-205ENST00000398978 INTS4Q96HW7 963 aaKnown RBP23.6■■□□□ 1.37
COL13A1-205ENST00000398978 LSG1Q9H089 658 aaKnown RBP23.6■■□□□ 1.37
COL13A1-205ENST00000398978 MBD3O95983 291 aa23.59■■□□□ 1.37
COL13A1-205ENST00000398978 TEFQ10587 303 aa23.59■■□□□ 1.37
COL13A1-205ENST00000398978 ZNF530Q6P9A1 599 aaPredicted RBP23.59■■□□□ 1.37
COL13A1-205ENST00000398978 PTH1RQ03431 593 aa23.59■■□□□ 1.37
COL13A1-205ENST00000398978 RUFY3Q7L099 469 aa23.59■■□□□ 1.37
COL13A1-205ENST00000398978 CASTP20810 708 aaKnown RBP23.58■■□□□ 1.37
COL13A1-205ENST00000398978 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.58■■□□□ 1.37
COL13A1-205ENST00000398978 CNTROBQ8N137 903 aa23.58■■□□□ 1.37
COL13A1-205ENST00000398978 RAD50Q92878 1312 aa23.58■■□□□ 1.37
COL13A1-205ENST00000398978 RAB11FIP3O75154 756 aa23.58■■□□□ 1.36
COL13A1-205ENST00000398978 COL9A3Q14050 684 aaPredicted RBP23.58■■□□□ 1.36
COL13A1-205ENST00000398978 ADCK5Q3MIX3 580 aa23.58■■□□□ 1.36
COL13A1-205ENST00000398978 PHF8Q9UPP1 1060 aa23.58■■□□□ 1.36
COL13A1-205ENST00000398978 RPAP1Q9BWH6 1393 aaPredicted RBP23.57■■□□□ 1.36
COL13A1-205ENST00000398978 RBM10P98175 930 aaKnown RBP23.57■■□□□ 1.36
COL13A1-205ENST00000398978 AIMP1Q12904 312 aaKnown RBP23.57■■□□□ 1.36
COL13A1-205ENST00000398978 TSPY26PQ9H489 355 aa23.57■■□□□ 1.36
COL13A1-205ENST00000398978 LRRC37A3O60309 1634 aa23.57■■□□□ 1.36
COL13A1-205ENST00000398978 FIBPO43427 364 aa23.56■■□□□ 1.36
COL13A1-205ENST00000398978 THEMISQ8N1K5 641 aaPredicted RBP23.56■■□□□ 1.36
COL13A1-205ENST00000398978 C9orf78Q9NZ63 289 aaPredicted RBP23.56■■□□□ 1.36
COL13A1-205ENST00000398978 NOL7Q9UMY1 257 aaKnown RBP23.56■■□□□ 1.36
COL13A1-205ENST00000398978 MAP3K2Q9Y2U5 619 aa23.56■■□□□ 1.36
COL13A1-205ENST00000398978 ESCO1Q5FWF5 840 aa23.56■■□□□ 1.36
COL13A1-205ENST00000398978 PRPF40BQ6NWY9 871 aaKnown RBP23.56■■□□□ 1.36
COL13A1-205ENST00000398978 CCDC83Q8IWF9 413 aa23.56■■□□□ 1.36
COL13A1-205ENST00000398978 OFD1O75665 1012 aa23.56■■□□□ 1.36
COL13A1-205ENST00000398978 DIAPH3Q9NSV4 1193 aa23.55■■□□□ 1.36
COL13A1-205ENST00000398978 ADCY9O60503 1353 aa23.55■■□□□ 1.36
COL13A1-205ENST00000398978 WDR33Q9C0J8 1336 aaKnown RBP23.55■■□□□ 1.36
COL13A1-205ENST00000398978 PTMAP06454 111 aaKnown RBP23.55■■□□□ 1.36
COL13A1-205ENST00000398978 ZNF830Q96NB3 372 aaPredicted RBP23.55■■□□□ 1.36
COL13A1-205ENST00000398978 SYT1P21579 422 aa23.54■■□□□ 1.36
COL13A1-205ENST00000398978 IP6K1Q92551 441 aa23.54■■□□□ 1.36
COL13A1-205ENST00000398978 TTC14Q96N46 770 aa23.54■■□□□ 1.36
COL13A1-205ENST00000398978 PSME1Q06323 249 aa23.53■■□□□ 1.36
COL13A1-205ENST00000398978 TCEANC2Q96MN5 208 aa23.53■■□□□ 1.36
COL13A1-205ENST00000398978 JAKMIP1Q96N16 626 aaKnown RBP23.53■■□□□ 1.36
COL13A1-205ENST00000398978 SIL1Q9H173 461 aa23.53■■□□□ 1.36
COL13A1-205ENST00000398978 AOX1Q06278 1338 aa23.53■■□□□ 1.36
COL13A1-205ENST00000398978 NECAB1Q8N987 351 aa23.52■■□□□ 1.36
COL13A1-205ENST00000398978 KLHDC4Q8TBB5 520 aa23.52■■□□□ 1.36
COL13A1-205ENST00000398978 CCDC8Q9H0W5 538 aaPredicted RBP23.52■■□□□ 1.36
COL13A1-205ENST00000398978 CEMIPQ8WUJ3 1361 aa23.52■■□□□ 1.36
COL13A1-205ENST00000398978 SMC3Q9UQE7 1217 aa23.52■■□□□ 1.36
COL13A1-205ENST00000398978 JARID2Q92833 1246 aaPredicted RBP23.51■■□□□ 1.35
COL13A1-205ENST00000398978 ZKSCAN5Q9Y2L8 839 aa23.51■■□□□ 1.35
COL13A1-205ENST00000398978 AACSQ86V21 672 aa23.51■■□□□ 1.35
COL13A1-205ENST00000398978 CLASRPQ8N2M8 674 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms