RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 TBC1D2BQ9UPU7 963 aa16.34■□□□□ 0.21
TOP3B-202ENST00000398793 LRRFIP2Q9Y608 721 aaKnown RBP16.34■□□□□ 0.21
TOP3B-202ENST00000398793 DCAF5Q96JK2 942 aa16.34■□□□□ 0.21
TOP3B-202ENST00000398793 MYD88Q99836 296 aa16.34■□□□□ 0.21
TOP3B-202ENST00000398793 TTLL7Q6ZT98 887 aa16.33■□□□□ 0.21
TOP3B-202ENST00000398793 OTUD7AQ8TE49 926 aaPredicted RBP16.33■□□□□ 0.21
TOP3B-202ENST00000398793 API5Q9BZZ5 524 aaKnown RBP16.33■□□□□ 0.21
TOP3B-202ENST00000398793 BICDL1Q6ZP65 573 aa16.33■□□□□ 0.2
TOP3B-202ENST00000398793 XIRP1Q702N8 1843 aaKnown RBP16.33■□□□□ 0.2
TOP3B-202ENST00000398793 RTL1A6NKG5 1358 aa16.32■□□□□ 0.2
TOP3B-202ENST00000398793 DLG5Q8TDM6 1919 aa16.32■□□□□ 0.2
TOP3B-202ENST00000398793 ZBTB7BO15156 539 aaPredicted RBP16.32■□□□□ 0.2
TOP3B-202ENST00000398793 ALDH1L2Q3SY69 923 aa16.32■□□□□ 0.2
TOP3B-202ENST00000398793 DCCP43146 1447 aa16.32■□□□□ 0.2
TOP3B-202ENST00000398793 RWDD1Q9H446 243 aaPredicted RBP16.32■□□□□ 0.2
TOP3B-202ENST00000398793 MAP4K4O95819 1239 aaPredicted RBP16.32■□□□□ 0.2
TOP3B-202ENST00000398793 OS9Q13438 667 aaPredicted RBP16.31■□□□□ 0.2
TOP3B-202ENST00000398793 L1TD1Q5T7N2 865 aaKnown RBP16.31■□□□□ 0.2
TOP3B-202ENST00000398793 ZBTB40Q9NUA8 1239 aa16.31■□□□□ 0.2
TOP3B-202ENST00000398793 PA2G4Q9UQ80 394 aaKnown RBP16.31■□□□□ 0.2
TOP3B-202ENST00000398793 CENPQQ7L2Z9 268 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-202ENST00000398793 SYNE4Q8N205 404 aa16.3■□□□□ 0.2
TOP3B-202ENST00000398793 SIRT2Q8IXJ6 389 aa16.3■□□□□ 0.2
TOP3B-202ENST00000398793 PNMA6EA0A0J9YXQ4 647 aa16.29■□□□□ 0.2
TOP3B-202ENST00000398793 MARCH10Q8NA82 808 aaPredicted RBP16.29■□□□□ 0.2
TOP3B-202ENST00000398793 FMNL2Q96PY5 1086 aa16.29■□□□□ 0.2
TOP3B-202ENST00000398793 ROBO1Q9Y6N7 1651 aa16.29■□□□□ 0.2
TOP3B-202ENST00000398793 PCDH11XQ9BZA7 1347 aa16.29■□□□□ 0.2
TOP3B-202ENST00000398793 PCDH11YQ9BZA8 1340 aa16.29■□□□□ 0.2
TOP3B-202ENST00000398793 PHF14O94880 888 aa16.29■□□□□ 0.2
TOP3B-202ENST00000398793 CLCN1P35523 988 aa16.29■□□□□ 0.2
TOP3B-202ENST00000398793 SPRYD3Q8NCJ5 442 aa16.28■□□□□ 0.2
TOP3B-202ENST00000398793 KDM6AO15550 1401 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-202ENST00000398793 COL5A2P05997 1499 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-202ENST00000398793 UBTFL1P0CB47 393 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-202ENST00000398793 DNAAF4Q8WXU2 420 aa16.27■□□□□ 0.2
TOP3B-202ENST00000398793 SRCIN1Q9C0H9 1055 aa16.27■□□□□ 0.2
TOP3B-202ENST00000398793 DBF4Q9UBU7 674 aaPredicted RBP16.27■□□□□ 0.2
TOP3B-202ENST00000398793 AFF2P51816 1311 aa16.27■□□□□ 0.2
TOP3B-202ENST00000398793 SEC24BO95487 1268 aa16.26■□□□□ 0.19
TOP3B-202ENST00000398793 SNRPA1P09661 255 aaKnown RBP16.26■□□□□ 0.19
TOP3B-202ENST00000398793 UBE3BQ7Z3V4 1068 aa16.26■□□□□ 0.19
TOP3B-202ENST00000398793 WWC3Q9ULE0 1092 aa16.26■□□□□ 0.19
TOP3B-202ENST00000398793 ATP6V1AP38606 617 aa16.25■□□□□ 0.19
TOP3B-202ENST00000398793 QTRT2Q9H974 415 aaKnown RBP16.25■□□□□ 0.19
TOP3B-202ENST00000398793 SRGAP3O43295 1099 aa16.25■□□□□ 0.19
TOP3B-202ENST00000398793 HTATSF1O43719 755 aaKnown RBP16.25■□□□□ 0.19
TOP3B-202ENST00000398793 SURF6O75683 361 aaKnown RBP16.25■□□□□ 0.19
TOP3B-202ENST00000398793 NBPF26B4DH59 902 aa16.24■□□□□ 0.19
TOP3B-202ENST00000398793 CT47B1P0C2W7 299 aaPredicted RBP16.24■□□□□ 0.19
TOP3B-202ENST00000398793 NBPF14Q5TI25 921 aa16.24■□□□□ 0.19
TOP3B-202ENST00000398793 NBPF10Q6P3W6 841 aaKnown RBP16.24■□□□□ 0.19
TOP3B-202ENST00000398793 NUTM1Q86Y26 1132 aa16.24■□□□□ 0.19
TOP3B-202ENST00000398793 NBPF15Q8N660 670 aa16.24■□□□□ 0.19
TOP3B-202ENST00000398793 MARF1Q9Y4F3 1742 aaKnown RBP16.24■□□□□ 0.19
TOP3B-202ENST00000398793 MFAP1P55081 439 aaKnown RBP16.24■□□□□ 0.19
TOP3B-202ENST00000398793 UNC5CLQ8IV45 518 aa16.24■□□□□ 0.19
TOP3B-202ENST00000398793 ATG3Q9NT62 314 aa16.24■□□□□ 0.19
TOP3B-202ENST00000398793 USP44Q9H0E7 712 aa16.23■□□□□ 0.19
TOP3B-202ENST00000398793 ANKRD13DQ6ZTN6 518 aa16.23■□□□□ 0.19
TOP3B-202ENST00000398793 ZBTB1Q9Y2K1 713 aa16.23■□□□□ 0.19
TOP3B-202ENST00000398793 NCOA3Q9Y6Q9 1424 aa16.23■□□□□ 0.19
TOP3B-202ENST00000398793 KIF24Q5T7B8 1368 aa16.23■□□□□ 0.19
TOP3B-202ENST00000398793 KDM2BQ8NHM5 1336 aa16.23■□□□□ 0.19
TOP3B-202ENST00000398793 PRDM4Q9UKN5 801 aa16.22■□□□□ 0.19
TOP3B-202ENST00000398793 CEMIPQ8WUJ3 1361 aa16.22■□□□□ 0.19
TOP3B-202ENST00000398793 FAM89AQ96GI7 184 aa16.22■□□□□ 0.19
TOP3B-202ENST00000398793 SLC4A9Q96Q91 983 aa16.22■□□□□ 0.19
TOP3B-202ENST00000398793 TRPM3Q9HCF6 1732 aaPredicted RBP16.22■□□□□ 0.19
TOP3B-202ENST00000398793 NPHP1O15259 732 aa16.21■□□□□ 0.19
TOP3B-202ENST00000398793 HSP90AB1P08238 724 aaKnown RBP16.21■□□□□ 0.19
TOP3B-202ENST00000398793 PPP1R42Q7Z4L9 355 aa16.21■□□□□ 0.19
TOP3B-202ENST00000398793 NDUFB9Q9Y6M9 179 aa16.21■□□□□ 0.19
TOP3B-202ENST00000398793 CPDO75976 1380 aa16.21■□□□□ 0.19
TOP3B-202ENST00000398793 SPATA31A1Q5TZJ5 1347 aa16.21■□□□□ 0.19
TOP3B-202ENST00000398793 A0A087WZG4 1122 aa16.21■□□□□ 0.19
TOP3B-202ENST00000398793 GNAI2P04899 355 aa16.21■□□□□ 0.18
TOP3B-202ENST00000398793 PDCL3Q9H2J4 239 aa16.21■□□□□ 0.18
TOP3B-202ENST00000398793 SLIT3O75094 1523 aa16.2■□□□□ 0.18
TOP3B-202ENST00000398793 CEP85Q6P2H3 762 aa16.2■□□□□ 0.18
TOP3B-202ENST00000398793 TRIM37O94972 964 aa16.2■□□□□ 0.18
TOP3B-202ENST00000398793 PDIA6Q15084 440 aa16.2■□□□□ 0.18
TOP3B-202ENST00000398793 ABCC4O15439 1325 aa16.19■□□□□ 0.18
TOP3B-202ENST00000398793 NEXNQ0ZGT2 675 aa16.19■□□□□ 0.18
TOP3B-202ENST00000398793 LTBP4Q8N2S1 1624 aa16.19■□□□□ 0.18
TOP3B-202ENST00000398793 HLFQ16534 295 aa16.19■□□□□ 0.18
TOP3B-202ENST00000398793 PANK2Q9BZ23 570 aa16.19■□□□□ 0.18
TOP3B-202ENST00000398793 DDX21Q9NR30 783 aaKnown RBP eCLIP16.19■□□□□ 0.18
TOP3B-202ENST00000398793 SEPT12Q8IYM1 358 aa16.19■□□□□ 0.18
TOP3B-202ENST00000398793 RILPL2Q969X0 211 aa16.19■□□□□ 0.18
TOP3B-202ENST00000398793 ZNF594Q96JF6 807 aaPredicted RBP16.19■□□□□ 0.18
TOP3B-202ENST00000398793 XRCC6P12956 609 aaKnown RBP eCLIP16.18■□□□□ 0.182e-7■■■□□ 15.7
TOP3B-202ENST00000398793 FAM161AQ3B820 660 aa16.18■□□□□ 0.18
TOP3B-202ENST00000398793 TRIM6-TRIM34B2RNG4 842 aa16.18■□□□□ 0.18
TOP3B-202ENST00000398793 BCL11BQ9C0K0 894 aaPredicted RBP16.18■□□□□ 0.18
TOP3B-202ENST00000398793 EPHA10Q5JZY3 1008 aa16.17■□□□□ 0.18
TOP3B-202ENST00000398793 KIF1AQ12756 1690 aa16.17■□□□□ 0.18
TOP3B-202ENST00000398793 CCT4P50991 539 aaKnown RBP16.17■□□□□ 0.18
TOP3B-202ENST00000398793 KSR2Q6VAB6 950 aa16.17■□□□□ 0.18
TOP3B-202ENST00000398793 CHD1LQ86WJ1 897 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms