RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 DCCP43146 1447 aa16.96■□□□□ 0.31
PRAME-202ENST00000398743 TMEM94Q12767 1356 aa16.96■□□□□ 0.31
PRAME-202ENST00000398743 RILPL2Q969X0 211 aa16.96■□□□□ 0.31
PRAME-202ENST00000398743 ESYT1Q9BSJ8 1104 aa16.96■□□□□ 0.31
PRAME-202ENST00000398743 IL1RAPL2Q9NP60 686 aa16.96■□□□□ 0.31
PRAME-202ENST00000398743 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
PRAME-202ENST00000398743 BRPF3Q9ULD4 1205 aa16.95■□□□□ 0.3
PRAME-202ENST00000398743 TUBGCP6Q96RT7 1819 aa16.95■□□□□ 0.3
PRAME-202ENST00000398743 ADAMTS7Q9UKP4 1686 aa16.95■□□□□ 0.3
PRAME-202ENST00000398743 IL27Q8NEV9 243 aa16.95■□□□□ 0.3
PRAME-202ENST00000398743 RHPN1Q8TCX5 695 aa16.95■□□□□ 0.3
PRAME-202ENST00000398743 KIF1BPQ96EK5 621 aa16.95■□□□□ 0.3
PRAME-202ENST00000398743 L1TD1Q5T7N2 865 aaKnown RBP16.94■□□□□ 0.3
PRAME-202ENST00000398743 ALDH1L1O75891 902 aa16.94■□□□□ 0.3
PRAME-202ENST00000398743 CHMLP26374 656 aa16.94■□□□□ 0.3
PRAME-202ENST00000398743 KSR2Q6VAB6 950 aa16.94■□□□□ 0.3
PRAME-202ENST00000398743 HYPKQ9NX55 129 aa16.94■□□□□ 0.3
PRAME-202ENST00000398743 MAP3K2Q9Y2U5 619 aa16.94■□□□□ 0.3
PRAME-202ENST00000398743 SIPA1L3O60292 1781 aaPredicted RBP16.93■□□□□ 0.3
PRAME-202ENST00000398743 PTMSP20962 102 aa16.93■□□□□ 0.3
PRAME-202ENST00000398743 PROSER3Q2NL68 480 aa16.93■□□□□ 0.3
PRAME-202ENST00000398743 HSP90AB4PQ58FF6 505 aa16.93■□□□□ 0.3
PRAME-202ENST00000398743 NLRP2Q9NX02 1062 aa16.93■□□□□ 0.3
PRAME-202ENST00000398743 PRAMEF22A3QJZ6 481 aa16.92■□□□□ 0.3
PRAME-202ENST00000398743 MCCP23508 829 aa16.92■□□□□ 0.3
PRAME-202ENST00000398743 NUTM1Q86Y26 1132 aa16.92■□□□□ 0.3
PRAME-202ENST00000398743 RGPD5Q99666 1765 aa16.92■□□□□ 0.3
PRAME-202ENST00000398743 TATP17735 454 aaPredicted RBP16.92■□□□□ 0.3
PRAME-202ENST00000398743 GZF1Q9H116 711 aaPredicted RBP16.92■□□□□ 0.3
PRAME-202ENST00000398743 C9orf78Q9NZ63 289 aaPredicted RBP16.92■□□□□ 0.3
PRAME-202ENST00000398743 MTX1Q13505 466 aa16.91■□□□□ 0.3
PRAME-202ENST00000398743 UNC5CLQ8IV45 518 aa16.91■□□□□ 0.3
PRAME-202ENST00000398743 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
PRAME-202ENST00000398743 HDAC5Q9UQL6 1122 aa16.91■□□□□ 0.3
PRAME-202ENST00000398743 NPHP3Q7Z494 1330 aa16.91■□□□□ 0.3
PRAME-202ENST00000398743 DDX58O95786 925 aaKnown RBP16.91■□□□□ 0.3
PRAME-202ENST00000398743 CADPS2Q86UW7 1296 aa16.91■□□□□ 0.3
PRAME-202ENST00000398743 ANO2Q9NQ90 1003 aa16.91■□□□□ 0.3
PRAME-202ENST00000398743 SPG7Q9UQ90 795 aa16.91■□□□□ 0.3
PRAME-202ENST00000398743 SSFA2P28290 1259 aa16.9■□□□□ 0.3
PRAME-202ENST00000398743 ZNF790Q6PG37 636 aa16.9■□□□□ 0.3
PRAME-202ENST00000398743 SLC52A2Q9HAB3 445 aa16.9■□□□□ 0.3
PRAME-202ENST00000398743 DDX21Q9NR30 783 aaKnown RBP eCLIP16.9■□□□□ 0.3
PRAME-202ENST00000398743 GOLGA6L3A6NEY3 463 aa16.89■□□□□ 0.3
PRAME-202ENST00000398743 PHKG2P15735 406 aa16.89■□□□□ 0.3
PRAME-202ENST00000398743 NUCB2P80303 420 aa16.89■□□□□ 0.3
PRAME-202ENST00000398743 PI4K2BQ8TCG2 481 aa16.89■□□□□ 0.3
PRAME-202ENST00000398743 CWC22Q9HCG8 908 aaKnown RBP16.89■□□□□ 0.3
PRAME-202ENST00000398743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.89■□□□□ 0.3
PRAME-202ENST00000398743 KDM6AO15550 1401 aaPredicted RBP16.89■□□□□ 0.3
PRAME-202ENST00000398743 TNS3Q68CZ2 1445 aa16.89■□□□□ 0.3
PRAME-202ENST00000398743 ABCC6O95255 1503 aa16.89■□□□□ 0.3
PRAME-202ENST00000398743 ANAPC15P60006 121 aa16.89■□□□□ 0.29
PRAME-202ENST00000398743 CLEC17AQ6ZS10 378 aa16.89■□□□□ 0.29
PRAME-202ENST00000398743 MEGF6O75095 1541 aa16.88■□□□□ 0.29
PRAME-202ENST00000398743 PLEKHG2Q9H7P9 1386 aa16.88■□□□□ 0.29
PRAME-202ENST00000398743 CSB-PGBD3P0DP91 1061 aa16.88■□□□□ 0.29
PRAME-202ENST00000398743 OS9Q13438 667 aaPredicted RBP16.88■□□□□ 0.29
PRAME-202ENST00000398743 SKOR2Q2VWA4 1001 aaPredicted RBP16.88■□□□□ 0.29
PRAME-202ENST00000398743 LINS1Q8NG48 757 aa16.88■□□□□ 0.29
PRAME-202ENST00000398743 GOLGA6L22H0YM25 854 aa16.88■□□□□ 0.29
PRAME-202ENST00000398743 EPB41L2O43491 1005 aaKnown RBP16.88■□□□□ 0.29
PRAME-202ENST00000398743 CWF19L2Q2TBE0 894 aaKnown RBP16.88■□□□□ 0.29
PRAME-202ENST00000398743 STRCP1A6NGW2 1772 aa16.87■□□□□ 0.29
PRAME-202ENST00000398743 FSD2A1L4K1 749 aa16.87■□□□□ 0.29
PRAME-202ENST00000398743 MCM2P49736 904 aa16.87■□□□□ 0.29
PRAME-202ENST00000398743 NEK4P51957 841 aa16.87■□□□□ 0.29
PRAME-202ENST00000398743 IFNL2Q8IZJ0 200 aa16.87■□□□□ 0.29
PRAME-202ENST00000398743 SLC39A6Q13433 755 aa16.87■□□□□ 0.29
PRAME-202ENST00000398743 PDIA6Q15084 440 aa16.87■□□□□ 0.29
PRAME-202ENST00000398743 CNTROBQ8N137 903 aa16.87■□□□□ 0.29
PRAME-202ENST00000398743 CABLES1Q8TDN4 633 aa16.87■□□□□ 0.29
PRAME-202ENST00000398743 TTC41PQ6P2S7 1318 aa16.86■□□□□ 0.29
PRAME-202ENST00000398743 USP42Q9H9J4 1324 aaKnown RBP16.86■□□□□ 0.29
PRAME-202ENST00000398743 COL18A1P39060 1754 aa16.86■□□□□ 0.29
PRAME-202ENST00000398743 AIMP1Q12904 312 aaKnown RBP16.86■□□□□ 0.29
PRAME-202ENST00000398743 NFATC2IPQ8NCF5 419 aa16.86■□□□□ 0.29
PRAME-202ENST00000398743 SCN11AQ9UI33 1791 aa16.86■□□□□ 0.29
PRAME-202ENST00000398743 GRM8O00222 908 aa16.85■□□□□ 0.29
PRAME-202ENST00000398743 ERC1Q8IUD2 1116 aa16.85■□□□□ 0.29
PRAME-202ENST00000398743 CLASRPQ8N2M8 674 aaKnown RBP16.85■□□□□ 0.29
PRAME-202ENST00000398743 PALD1Q9ULE6 856 aa16.85■□□□□ 0.29
PRAME-202ENST00000398743 UTYO14607 1347 aa16.85■□□□□ 0.29
PRAME-202ENST00000398743 BAG4O95429 457 aaKnown RBP16.85■□□□□ 0.29
PRAME-202ENST00000398743 MAP4K4O95819 1239 aaPredicted RBP16.85■□□□□ 0.29
PRAME-202ENST00000398743 CYP2E1P05181 493 aaPredicted RBP16.85■□□□□ 0.29
PRAME-202ENST00000398743 IL17RAQ96F46 866 aa16.85■□□□□ 0.29
PRAME-202ENST00000398743 CHRNA2Q15822 529 aa16.84■□□□□ 0.29
PRAME-202ENST00000398743 RIC3Q7Z5B4 369 aa16.84■□□□□ 0.29
PRAME-202ENST00000398743 ZGPATQ8N5A5 531 aaKnown RBP16.84■□□□□ 0.29
PRAME-202ENST00000398743 DCAF5Q96JK2 942 aa16.84■□□□□ 0.29
PRAME-202ENST00000398743 CRYBG1Q9Y4K1 1723 aa16.84■□□□□ 0.29
PRAME-202ENST00000398743 SPATA31A3Q5VYP0 1347 aa16.84■□□□□ 0.29
PRAME-202ENST00000398743 GLRX3O76003 335 aaKnown RBP16.84■□□□□ 0.29
PRAME-202ENST00000398743 ISY1Q9ULR0 285 aaKnown RBP16.84■□□□□ 0.29
PRAME-202ENST00000398743 LARP1Q6PKG0 1096 aaKnown RBP16.83■□□□□ 0.28
PRAME-202ENST00000398743 TTC5Q8N0Z6 440 aa16.83■□□□□ 0.28
PRAME-202ENST00000398743 ARXQ96QS3 562 aa16.83■□□□□ 0.28
PRAME-202ENST00000398743 IL25Q9H293 177 aa16.83■□□□□ 0.28
PRAME-202ENST00000398743 CPDO75976 1380 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms