RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.97□□□□□ -0.49
PTCHD4-202ENST00000398738 MAP4K4O95819 1239 aaPredicted RBP11.96□□□□□ -0.49
PTCHD4-202ENST00000398738 NOLC1Q14978 699 aaKnown RBP eCLIP11.96□□□□□ -0.49
PTCHD4-202ENST00000398738 USP48Q86UV5 1035 aa11.96□□□□□ -0.49
PTCHD4-202ENST00000398738 POLKQ9UBT6 870 aa11.96□□□□□ -0.49
PTCHD4-202ENST00000398738 SPHKAPQ2M3C7 1700 aa11.96□□□□□ -0.49
PTCHD4-202ENST00000398738 ADCY5O95622 1261 aa11.96□□□□□ -0.49
PTCHD4-202ENST00000398738 SBNO2Q9Y2G9 1366 aa11.96□□□□□ -0.5
PTCHD4-202ENST00000398738 FIBPO43427 364 aa11.95□□□□□ -0.5
PTCHD4-202ENST00000398738 CEP85Q6P2H3 762 aa11.95□□□□□ -0.5
PTCHD4-202ENST00000398738 MCM10Q7L590 875 aa11.95□□□□□ -0.5
PTCHD4-202ENST00000398738 CCDC94Q9BW85 323 aaPredicted RBP11.95□□□□□ -0.5
PTCHD4-202ENST00000398738 CDK19Q9BWU1 502 aa11.95□□□□□ -0.5
PTCHD4-202ENST00000398738 TSR1Q2NL82 804 aaKnown RBP11.95□□□□□ -0.5
PTCHD4-202ENST00000398738 ARHGAP45Q92619 1136 aa11.95□□□□□ -0.5
PTCHD4-202ENST00000398738 SYAP1Q96A49 352 aaPredicted RBP11.95□□□□□ -0.5
PTCHD4-202ENST00000398738 ABCC4O15439 1325 aa11.95□□□□□ -0.5
PTCHD4-202ENST00000398738 SMAP1Q8IYB5 467 aaPredicted RBP11.94□□□□□ -0.5
PTCHD4-202ENST00000398738 MCM5P33992 734 aa11.94□□□□□ -0.5
PTCHD4-202ENST00000398738 ANKRD44Q8N8A2 993 aa11.94□□□□□ -0.5
PTCHD4-202ENST00000398738 MTERF4Q7Z6M4 381 aaKnown RBP11.94□□□□□ -0.5
PTCHD4-202ENST00000398738 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
PTCHD4-202ENST00000398738 MYRIPQ8NFW9 859 aa11.94□□□□□ -0.5
PTCHD4-202ENST00000398738 CNPY2Q9Y2B0 182 aa11.94□□□□□ -0.5
PTCHD4-202ENST00000398738 ATP2B3Q16720 1220 aa11.93□□□□□ -0.5
PTCHD4-202ENST00000398738 GIMAP6Q6P9H5 292 aa11.93□□□□□ -0.5
PTCHD4-202ENST00000398738 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
PTCHD4-202ENST00000398738 RBM33Q96EV2 1170 aaKnown RBP11.93□□□□□ -0.5
PTCHD4-202ENST00000398738 IFT57Q9NWB7 429 aa11.93□□□□□ -0.5
PTCHD4-202ENST00000398738 REREQ9P2R6 1566 aa11.93□□□□□ -0.5
PTCHD4-202ENST00000398738 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
PTCHD4-202ENST00000398738 NME9Q86XW9 330 aa11.93□□□□□ -0.5
PTCHD4-202ENST00000398738 BRD1O95696 1058 aa11.92□□□□□ -0.5
PTCHD4-202ENST00000398738 PDE1AP54750 535 aa11.92□□□□□ -0.5
PTCHD4-202ENST00000398738 KIF3AQ9Y496 699 aa11.92□□□□□ -0.5
PTCHD4-202ENST00000398738 TTLL12Q14166 644 aaPredicted RBP11.92□□□□□ -0.5
PTCHD4-202ENST00000398738 AEBP1Q8IUX7 1158 aa11.92□□□□□ -0.5
PTCHD4-202ENST00000398738 ARHGEF40Q8TER5 1519 aa11.92□□□□□ -0.5
PTCHD4-202ENST00000398738 NSD2O96028 1365 aa11.92□□□□□ -0.5
PTCHD4-202ENST00000398738 ZNF428Q96B54 188 aa11.92□□□□□ -0.5
PTCHD4-202ENST00000398738 IL1RAPL2Q9NP60 686 aa11.92□□□□□ -0.5
PTCHD4-202ENST00000398738 POGZQ7Z3K3 1410 aa11.91□□□□□ -0.5
PTCHD4-202ENST00000398738 MCCP23508 829 aa11.91□□□□□ -0.5
PTCHD4-202ENST00000398738 SIGLEC1Q9BZZ2 1709 aa11.91□□□□□ -0.5
PTCHD4-202ENST00000398738 U2AF2P26368 475 aaKnown RBP eCLIP11.91□□□□□ -0.58e-14■■■□□ 16.2
PTCHD4-202ENST00000398738 CPA1P15085 419 aa11.9□□□□□ -0.5
PTCHD4-202ENST00000398738 ZSCAN20P17040 1043 aaPredicted RBP11.9□□□□□ -0.5
PTCHD4-202ENST00000398738 IDI1Q13907 227 aa11.9□□□□□ -0.5
PTCHD4-202ENST00000398738 RPAP2Q8IXW5 612 aaPredicted RBP11.9□□□□□ -0.5
PTCHD4-202ENST00000398738 TMEM121BQ9BXQ6 578 aaPredicted RBP11.9□□□□□ -0.5
PTCHD4-202ENST00000398738 PHF14O94880 888 aa11.9□□□□□ -0.5
PTCHD4-202ENST00000398738 G2E3Q7L622 706 aa11.9□□□□□ -0.5
PTCHD4-202ENST00000398738 OCEL1Q9H607 264 aa11.9□□□□□ -0.5
PTCHD4-202ENST00000398738 BCL2L12Q9HB09 334 aa11.9□□□□□ -0.5
PTCHD4-202ENST00000398738 MYOM2P54296 1465 aa11.9□□□□□ -0.5
PTCHD4-202ENST00000398738 INO80Q9ULG1 1556 aaPredicted RBP11.9□□□□□ -0.5
PTCHD4-202ENST00000398738 MSH6P52701 1360 aa11.9□□□□□ -0.51
PTCHD4-202ENST00000398738 PDCL2Q8N4E4 241 aa11.9□□□□□ -0.51
PTCHD4-202ENST00000398738 PIBF1Q8WXW3 757 aa11.9□□□□□ -0.51
PTCHD4-202ENST00000398738 KIDINS220Q9ULH0 1771 aa11.89□□□□□ -0.51
PTCHD4-202ENST00000398738 ADGRL1O94910 1474 aa11.89□□□□□ -0.51
PTCHD4-202ENST00000398738 SULT6B1Q6IMI4 303 aa11.89□□□□□ -0.51
PTCHD4-202ENST00000398738 UNC5CLQ8IV45 518 aa11.89□□□□□ -0.51
PTCHD4-202ENST00000398738 SRCIN1Q9C0H9 1055 aa11.89□□□□□ -0.51
PTCHD4-202ENST00000398738 ESYT1Q9BSJ8 1104 aa11.89□□□□□ -0.51
PTCHD4-202ENST00000398738 PYCARDQ9ULZ3 195 aa11.89□□□□□ -0.51
PTCHD4-202ENST00000398738 IRF6O14896 467 aa11.88□□□□□ -0.51
PTCHD4-202ENST00000398738 HMMRO75330 724 aa11.88□□□□□ -0.51
PTCHD4-202ENST00000398738 DRC7Q8IY82 874 aa11.88□□□□□ -0.51
PTCHD4-202ENST00000398738 HECW2Q9P2P5 1572 aa11.88□□□□□ -0.51
PTCHD4-202ENST00000398738 DMTNQ08495 405 aa11.88□□□□□ -0.51
PTCHD4-202ENST00000398738 CHAF1AQ13111 956 aaPredicted RBP11.88□□□□□ -0.51
PTCHD4-202ENST00000398738 CAMK4Q16566 473 aa11.88□□□□□ -0.51
PTCHD4-202ENST00000398738 NUTM1Q86Y26 1132 aa11.88□□□□□ -0.51
PTCHD4-202ENST00000398738 HMGN5P82970 282 aaKnown RBP11.88□□□□□ -0.51
PTCHD4-202ENST00000398738 ASTLQ6HA08 431 aaPredicted RBP11.87□□□□□ -0.51
PTCHD4-202ENST00000398738 IL25Q9H293 177 aa11.87□□□□□ -0.51
PTCHD4-202ENST00000398738 MLH3Q9UHC1 1453 aa11.87□□□□□ -0.51
PTCHD4-202ENST00000398738 MED14O60244 1454 aa11.87□□□□□ -0.51
PTCHD4-202ENST00000398738 VPS37CA5D8V6 355 aaPredicted RBP11.87□□□□□ -0.51
PTCHD4-202ENST00000398738 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
PTCHD4-202ENST00000398738 ZNF592Q92610 1267 aa11.86□□□□□ -0.51
PTCHD4-202ENST00000398738 PTCH1Q13635 1447 aa11.86□□□□□ -0.51
PTCHD4-202ENST00000398738 TULP4Q9NRJ4 1543 aa11.86□□□□□ -0.51
PTCHD4-202ENST00000398738 WDR33Q9C0J8 1336 aaKnown RBP11.86□□□□□ -0.51
PTCHD4-202ENST00000398738 IL13P35225 146 aa11.86□□□□□ -0.51
PTCHD4-202ENST00000398738 NAA30Q147X3 362 aaPredicted RBP11.86□□□□□ -0.51
PTCHD4-202ENST00000398738 CCDC183Q5T5S1 534 aa11.86□□□□□ -0.51
PTCHD4-202ENST00000398738 FERMT3Q86UX7 667 aa11.86□□□□□ -0.51
PTCHD4-202ENST00000398738 PRIMPOLQ96LW4 560 aa11.86□□□□□ -0.51
PTCHD4-202ENST00000398738 ZFYVE16Q7Z3T8 1539 aa11.86□□□□□ -0.51
PTCHD4-202ENST00000398738 RTL1A6NKG5 1358 aa11.86□□□□□ -0.51
PTCHD4-202ENST00000398738 ADGRB2O60241 1585 aa11.86□□□□□ -0.51
PTCHD4-202ENST00000398738 MX1P20591 662 aa11.86□□□□□ -0.51
PTCHD4-202ENST00000398738 DIP2CQ9Y2E4 1556 aa11.85□□□□□ -0.51
PTCHD4-202ENST00000398738 NPATQ14207 1427 aa11.85□□□□□ -0.51
PTCHD4-202ENST00000398738 PNMA6EA0A0J9YXQ4 647 aa11.85□□□□□ -0.51
PTCHD4-202ENST00000398738 AP5Z1O43299 807 aa11.85□□□□□ -0.51
PTCHD4-202ENST00000398738 CHMLP26374 656 aa11.85□□□□□ -0.51
PTCHD4-202ENST00000398738 LMOD3Q0VAK6 560 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms