RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 LETM1O95202 739 aaPredicted RBP12.38□□□□□ -0.43
HMGCLL1-205ENST00000398661 LMBRD1Q9NUN5 540 aa12.38□□□□□ -0.43
HMGCLL1-205ENST00000398661 RGPD1P0DJD0 1748 aa12.37□□□□□ -0.43
HMGCLL1-205ENST00000398661 CBX1P83916 185 aa12.37□□□□□ -0.43
HMGCLL1-205ENST00000398661 SLC39A6Q13433 755 aa12.37□□□□□ -0.43
HMGCLL1-205ENST00000398661 SSH1Q8WYL5 1049 aa12.37□□□□□ -0.43
HMGCLL1-205ENST00000398661 PRAMEF22A3QJZ6 481 aa12.37□□□□□ -0.43
HMGCLL1-205ENST00000398661 RTL1A6NKG5 1358 aa12.37□□□□□ -0.43
HMGCLL1-205ENST00000398661 MEGF6O75095 1541 aa12.37□□□□□ -0.43
HMGCLL1-205ENST00000398661 PHRF1Q9P1Y6 1649 aaKnown RBP12.37□□□□□ -0.43
HMGCLL1-205ENST00000398661 CYP27B1O15528 508 aa12.36□□□□□ -0.43
HMGCLL1-205ENST00000398661 ZNF710Q8N1W2 664 aa12.36□□□□□ -0.43
HMGCLL1-205ENST00000398661 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
HMGCLL1-205ENST00000398661 FAM182BQ5T319 152 aa12.36□□□□□ -0.43
HMGCLL1-205ENST00000398661 TSPYL4Q9UJ04 414 aa12.36□□□□□ -0.43
HMGCLL1-205ENST00000398661 SMC4Q9NTJ3 1288 aa12.35□□□□□ -0.43
HMGCLL1-205ENST00000398661 KIAA2012Q0VF49 1180 aa12.35□□□□□ -0.43
HMGCLL1-205ENST00000398661 JARID2Q92833 1246 aaPredicted RBP12.35□□□□□ -0.43
HMGCLL1-205ENST00000398661 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
HMGCLL1-205ENST00000398661 AK9Q5TCS8 1911 aa12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 ANXA1P04083 346 aa12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 PIP4K2AP48426 406 aaPredicted RBP12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 NUCB2P80303 420 aa12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 NUCB1Q02818 461 aa12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 LRSAM1Q6UWE0 723 aa12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 PRIMPOLQ96LW4 560 aa12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 RBM27Q9P2N5 1060 aaKnown RBP12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 NHSL1Q5SYE7 1610 aa12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 WDR17Q8IZU2 1322 aa12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 KIF16BQ96L93 1317 aa12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 DNTTIP2Q5QJE6 756 aaKnown RBP12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 DDX19BQ9UMR2 479 aa12.34□□□□□ -0.43
HMGCLL1-205ENST00000398661 ZNF853P0CG23 659 aa12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 ATP2B3Q16720 1220 aa12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 TWISTNBQ3B726 338 aaPredicted RBP12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 BMP2KLQ5H9B9 411 aa12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 C1orf141Q5JVX7 400 aa12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 TSC1Q92574 1164 aa12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 NGLY1Q96IV0 654 aa12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 COL5A2P05997 1499 aaPredicted RBP12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 CYP2E1P05181 493 aaPredicted RBP12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 TATP17735 454 aaPredicted RBP12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 GTF2F1P35269 517 aaKnown RBP eCLIP12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 PLEKHO1Q53GL0 409 aaPredicted RBP12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 ITPRIPQ8IWB1 547 aa12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 GPT2Q8TD30 523 aa12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 LNPKQ9C0E8 428 aa12.33□□□□□ -0.44
HMGCLL1-205ENST00000398661 CPDO75976 1380 aa12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 KIF24Q5T7B8 1368 aa12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 MAP3K5Q99683 1374 aa12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 COL18A1P39060 1754 aa12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 VAMP4O75379 141 aa12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 EIF2S2P20042 333 aaKnown RBP12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 GNAI1P63096 354 aa12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 HMGN5P82970 282 aaKnown RBP12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 BCL11BQ9C0K0 894 aaPredicted RBP12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 NOB1Q9ULX3 412 aaKnown RBP12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 PHLPP1O60346 1717 aa12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 CHL1O00533 1208 aa12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 PTMAP06454 111 aaKnown RBP12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 IFT57Q9NWB7 429 aa12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 USP54Q70EL1 1684 aa12.32□□□□□ -0.44
HMGCLL1-205ENST00000398661 CRYBG1Q9Y4K1 1723 aa12.31□□□□□ -0.44
HMGCLL1-205ENST00000398661 CRB1P82279 1406 aa12.31□□□□□ -0.44
HMGCLL1-205ENST00000398661 PRPF40AO75400 957 aaKnown RBP12.31□□□□□ -0.44
HMGCLL1-205ENST00000398661 CHD1LQ86WJ1 897 aa12.31□□□□□ -0.44
HMGCLL1-205ENST00000398661 NAP1L2Q9ULW6 460 aaPredicted RBP12.31□□□□□ -0.44
HMGCLL1-205ENST00000398661 TRIM27P14373 513 aa12.31□□□□□ -0.44
HMGCLL1-205ENST00000398661 TEFQ10587 303 aa12.31□□□□□ -0.44
HMGCLL1-205ENST00000398661 TMEM51Q9NW97 253 aa12.31□□□□□ -0.44
HMGCLL1-205ENST00000398661 SYCE3A1L190 88 aa12.3□□□□□ -0.44
HMGCLL1-205ENST00000398661 LMOD3Q0VAK6 560 aa12.3□□□□□ -0.44
HMGCLL1-205ENST00000398661 TBC1D9Q6ZT07 1266 aa12.3□□□□□ -0.44
HMGCLL1-205ENST00000398661 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
HMGCLL1-205ENST00000398661 TMEM63CQ9P1W3 806 aa12.3□□□□□ -0.44
HMGCLL1-205ENST00000398661 RNMTO43148 476 aaKnown RBP12.3□□□□□ -0.44
HMGCLL1-205ENST00000398661 PHKG2P15735 406 aa12.3□□□□□ -0.44
HMGCLL1-205ENST00000398661 COL16A1Q07092 1604 aaPredicted RBP12.29□□□□□ -0.44
HMGCLL1-205ENST00000398661 BTBD11A6QL63 1104 aa12.29□□□□□ -0.44
HMGCLL1-205ENST00000398661 FAM98CQ17RN3 349 aaKnown RBP12.29□□□□□ -0.44
HMGCLL1-205ENST00000398661 AKAP4Q5JQC9 854 aa12.29□□□□□ -0.44
HMGCLL1-205ENST00000398661 TAF3Q5VWG9 929 aa12.29□□□□□ -0.44
HMGCLL1-205ENST00000398661 G2E3Q7L622 706 aa12.29□□□□□ -0.44
HMGCLL1-205ENST00000398661 CT47B1P0C2W7 299 aaPredicted RBP12.29□□□□□ -0.44
HMGCLL1-205ENST00000398661 IL2RBP14784 551 aa12.29□□□□□ -0.44
HMGCLL1-205ENST00000398661 TAF7Q15545 349 aaPredicted RBP12.29□□□□□ -0.44
HMGCLL1-205ENST00000398661 ZBTB40Q9NUA8 1239 aa12.29□□□□□ -0.44
HMGCLL1-205ENST00000398661 PKP1Q13835 747 aa12.28□□□□□ -0.44
HMGCLL1-205ENST00000398661 ATF7IPQ6VMQ6 1270 aa12.28□□□□□ -0.44
HMGCLL1-205ENST00000398661 RNF214Q8ND24 703 aa12.28□□□□□ -0.44
HMGCLL1-205ENST00000398661 ZCRB1Q8TBF4 217 aaKnown RBP12.28□□□□□ -0.44
HMGCLL1-205ENST00000398661 KIF3AQ9Y496 699 aa12.28□□□□□ -0.44
HMGCLL1-205ENST00000398661 F6X3S4 739 aa12.28□□□□□ -0.44
HMGCLL1-205ENST00000398661 PTCD1O75127 700 aaKnown RBP12.28□□□□□ -0.44
HMGCLL1-205ENST00000398661 PIBF1Q8WXW3 757 aa12.28□□□□□ -0.44
HMGCLL1-205ENST00000398661 ABCA3Q99758 1704 aa12.27□□□□□ -0.44
HMGCLL1-205ENST00000398661 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.45
HMGCLL1-205ENST00000398661 RABEP1Q15276 862 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms