RNA–Protein interactions for RNA: ENST00000398361.7

GPM6B-204, Transcript of glycoprotein M6B, humanhuman

TSL 2 BASIC

Gene GPM6B, Length 1,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-204ENST00000398361 RIPK4P57078 832 aa25.18■■□□□ 1.62
GPM6B-204ENST00000398361 ZNF790Q6PG37 636 aa25.18■■□□□ 1.62
GPM6B-204ENST00000398361 NLGN1Q8N2Q7 840 aa25.18■■□□□ 1.62
GPM6B-204ENST00000398361 CRKLP46109 303 aaKnown RBP25.17■■□□□ 1.62
GPM6B-204ENST00000398361 VSIG10Q8N0Z9 540 aa25.16■■□□□ 1.62
GPM6B-204ENST00000398361 LMOD3Q0VAK6 560 aa25.15■■□□□ 1.62
GPM6B-204ENST00000398361 TAF7Q15545 349 aaPredicted RBP25.15■■□□□ 1.62
GPM6B-204ENST00000398361 PNISRQ8TF01 805 aaKnown RBP25.15■■□□□ 1.62
GPM6B-204ENST00000398361 N4BP2Q86UW6 1770 aaPredicted RBP25.14■■□□□ 1.62
GPM6B-204ENST00000398361 GYS1P13807 737 aa25.14■■□□□ 1.62
GPM6B-204ENST00000398361 DNAJC10Q8IXB1 793 aa25.14■■□□□ 1.62
GPM6B-204ENST00000398361 ZNF496Q96IT1 587 aaPredicted RBP25.14■■□□□ 1.62
GPM6B-204ENST00000398361 RRP7AQ9Y3A4 280 aaKnown RBP25.14■■□□□ 1.62
GPM6B-204ENST00000398361 KIAA1551Q9HCM1 1747 aa25.13■■□□□ 1.61
GPM6B-204ENST00000398361 THUMPD2Q9BTF0 503 aaKnown RBP25.13■■□□□ 1.61
GPM6B-204ENST00000398361 GOLGB1Q14789 3259 aaKnown RBP25.12■■□□□ 1.61
GPM6B-204ENST00000398361 KCNQ3O43525 872 aa25.12■■□□□ 1.61
GPM6B-204ENST00000398361 NEUROD2Q15784 382 aa25.12■■□□□ 1.61
GPM6B-204ENST00000398361 FMNL2Q96PY5 1086 aa25.12■■□□□ 1.61
GPM6B-204ENST00000398361 HEG1Q9ULI3 1381 aa25.12■■□□□ 1.61
GPM6B-204ENST00000398361 KDM3BQ7LBC6 1761 aa25.1■■□□□ 1.61
GPM6B-204ENST00000398361 INTS5Q6P9B9 1019 aaKnown RBP25.1■■□□□ 1.61
GPM6B-204ENST00000398361 CCDC87Q9NVE4 849 aa25.1■■□□□ 1.61
GPM6B-204ENST00000398361 PARP3Q9Y6F1 533 aa25.1■■□□□ 1.61
GPM6B-204ENST00000398361 CYP19A1P11511 503 aaPredicted RBP25.09■■□□□ 1.61
GPM6B-204ENST00000398361 C10orf71Q711Q0 1435 aa25.09■■□□□ 1.61
GPM6B-204ENST00000398361 APAF1O14727 1248 aa25.08■■□□□ 1.61
GPM6B-204ENST00000398361 TEX13AQ9BXU3 409 aaPredicted RBP25.08■■□□□ 1.61
GPM6B-204ENST00000398361 MIS18AQ9NYP9 233 aa25.08■■□□□ 1.61
GPM6B-204ENST00000398361 SRP68Q9UHB9 627 aaKnown RBP25.08■■□□□ 1.61
GPM6B-204ENST00000398361 WWC3Q9ULE0 1092 aa25.08■■□□□ 1.61
GPM6B-204ENST00000398361 USP42Q9H9J4 1324 aaKnown RBP25.08■■□□□ 1.6
GPM6B-204ENST00000398361 PXDNLA1KZ92 1463 aa25.08■■□□□ 1.6
GPM6B-204ENST00000398361 TRIM35Q9UPQ4 493 aa25.07■■□□□ 1.6
GPM6B-204ENST00000398361 BRCA1P38398 1863 aaKnown RBP25.06■■□□□ 1.6
GPM6B-204ENST00000398361 TGFB2P61812 414 aa25.06■■□□□ 1.6
GPM6B-204ENST00000398361 STARD3NLO95772 234 aa25.05■■□□□ 1.6
GPM6B-204ENST00000398361 SOS1Q07889 1333 aaPredicted RBP25.05■■□□□ 1.6
GPM6B-204ENST00000398361 SENP3-EIF4A1A0A087X0R7 540 aa25.04■■□□□ 1.6
GPM6B-204ENST00000398361 ZPR1O75312 459 aa25.03■■□□□ 1.6
GPM6B-204ENST00000398361 SNRPA1P09661 255 aaKnown RBP25.03■■□□□ 1.6
GPM6B-204ENST00000398361 FKBP8Q14318 412 aa25.03■■□□□ 1.6
GPM6B-204ENST00000398361 BABAM1Q9NWV8 329 aa25.03■■□□□ 1.6
GPM6B-204ENST00000398361 AFDNP55196 1824 aaKnown RBP25.01■■□□□ 1.59
GPM6B-204ENST00000398361 TSPYL4Q9UJ04 414 aa25.01■■□□□ 1.59
GPM6B-204ENST00000398361 ZBTB1Q9Y2K1 713 aa25.01■■□□□ 1.59
GPM6B-204ENST00000398361 COL15A1P39059 1388 aa25.01■■□□□ 1.59
GPM6B-204ENST00000398361 ARFGEF1Q9Y6D6 1849 aa25■■□□□ 1.59
GPM6B-204ENST00000398361 A0A0G2JLW4 131 aa25■■□□□ 1.59
GPM6B-204ENST00000398361 EIF4A1P60842 406 aaKnown RBP25■■□□□ 1.59
GPM6B-204ENST00000398361 USPL1Q5W0Q7 1092 aa25■■□□□ 1.59
GPM6B-204ENST00000398361 ATP10DQ9P241 1426 aa25■■□□□ 1.59
GPM6B-204ENST00000398361 GIGYF1O75420 1035 aaPredicted RBP24.99■■□□□ 1.59
GPM6B-204ENST00000398361 DDR1Q08345 913 aa24.99■■□□□ 1.59
GPM6B-204ENST00000398361 USP16Q9Y5T5 823 aa24.99■■□□□ 1.59
GPM6B-204ENST00000398361 LAMB4A4D0S4 1761 aa24.98■■□□□ 1.59
GPM6B-204ENST00000398361 PRAMEF22A3QJZ6 481 aa24.98■■□□□ 1.59
GPM6B-204ENST00000398361 DPEP1P16444 411 aa24.98■■□□□ 1.59
GPM6B-204ENST00000398361 FAM9BQ8IZU0 186 aa24.98■■□□□ 1.59
GPM6B-204ENST00000398361 NARFQ9UHQ1 456 aa24.98■■□□□ 1.59
GPM6B-204ENST00000398361 ADCY9O60503 1353 aa24.97■■□□□ 1.59
GPM6B-204ENST00000398361 CANXP27824 592 aaKnown RBP24.97■■□□□ 1.59
GPM6B-204ENST00000398361 C1QTNF8P60827 252 aa24.97■■□□□ 1.59
GPM6B-204ENST00000398361 BCS1LQ9Y276 419 aa24.97■■□□□ 1.59
GPM6B-204ENST00000398361 CHL1O00533 1208 aa24.96■■□□□ 1.59
GPM6B-204ENST00000398361 TM4SF1P30408 202 aa24.96■■□□□ 1.59
GPM6B-204ENST00000398361 DIEXFQ68CQ4 756 aaKnown RBP24.96■■□□□ 1.59
GPM6B-204ENST00000398361 CEP350Q5VT06 3117 aa24.96■■□□□ 1.59
GPM6B-204ENST00000398361 POLRMTO00411 1230 aaKnown RBP24.95■■□□□ 1.58
GPM6B-204ENST00000398361 A1BGP04217 495 aa24.95■■□□□ 1.58
GPM6B-204ENST00000398361 CALD1Q05682 793 aaKnown RBP24.95■■□□□ 1.58
GPM6B-204ENST00000398361 NRXN2Q9P2S2 1712 aa24.95■■□□□ 1.58
GPM6B-204ENST00000398361 CCER2I3L3R5 266 aa24.94■■□□□ 1.58
GPM6B-204ENST00000398361 EIF5P55010 431 aaKnown RBP24.94■■□□□ 1.58
GPM6B-204ENST00000398361 NCBP3Q53F19 620 aaKnown RBP24.94■■□□□ 1.58
GPM6B-204ENST00000398361 LAS1LQ9Y4W2 734 aaKnown RBP24.94■■□□□ 1.58
GPM6B-204ENST00000398361 A0A087WZG4 1122 aa24.93■■□□□ 1.58
GPM6B-204ENST00000398361 IL6STP40189 918 aaPredicted RBP24.93■■□□□ 1.58
GPM6B-204ENST00000398361 CCDC27Q2M243 656 aa24.93■■□□□ 1.58
GPM6B-204ENST00000398361 CFAP44Q96MT7 982 aa24.93■■□□□ 1.58
GPM6B-204ENST00000398361 SCN7AQ01118 1682 aa24.92■■□□□ 1.58
GPM6B-204ENST00000398361 GPBP1L1Q9HC44 474 aaPredicted RBP24.91■■□□□ 1.58
GPM6B-204ENST00000398361 PIM2Q9P1W9 311 aa24.91■■□□□ 1.58
GPM6B-204ENST00000398361 ZNF853P0CG23 659 aa24.9■■□□□ 1.58
GPM6B-204ENST00000398361 KCNA3P22001 575 aa24.9■■□□□ 1.58
GPM6B-204ENST00000398361 NFIXQ14938 502 aa24.9■■□□□ 1.58
GPM6B-204ENST00000398361 BCL2L12Q9HB09 334 aa24.9■■□□□ 1.58
GPM6B-204ENST00000398361 IFT57Q9NWB7 429 aa24.9■■□□□ 1.58
GPM6B-204ENST00000398361 DLEC1Q9Y238 1755 aa24.9■■□□□ 1.58
GPM6B-204ENST00000398361 GNAI1P63096 354 aa24.89■■□□□ 1.58
GPM6B-204ENST00000398361 ARHGAP27Q6ZUM4 889 aa24.89■■□□□ 1.58
GPM6B-204ENST00000398361 ZNF330Q9Y3S2 320 aaPredicted RBP24.89■■□□□ 1.58
GPM6B-204ENST00000398361 NPM2Q86SE8 214 aaKnown RBP24.88■■□□□ 1.57
GPM6B-204ENST00000398361 WWC1Q8IX03 1113 aa24.88■■□□□ 1.57
GPM6B-204ENST00000398361 NBPF26B4DH59 902 aa24.87■■□□□ 1.57
GPM6B-204ENST00000398361 PIP4K2AP48426 406 aaPredicted RBP24.87■■□□□ 1.57
GPM6B-204ENST00000398361 DALRD3Q5D0E6 543 aaKnown RBP24.87■■□□□ 1.57
GPM6B-204ENST00000398361 NBPF10Q6P3W6 841 aaKnown RBP24.87■■□□□ 1.57
GPM6B-204ENST00000398361 NBPF15Q8N660 670 aa24.87■■□□□ 1.57
GPM6B-204ENST00000398361 ZNF526Q8TF50 670 aaPredicted RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms