RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 IPO9Q96P70 1041 aaKnown RBP24.5■■□□□ 1.51
PDLIM2-204ENST00000397760 DBF4Q9UBU7 674 aaPredicted RBP24.49■■□□□ 1.51
PDLIM2-204ENST00000397760 FLIIQ13045 1269 aa24.49■■□□□ 1.51
PDLIM2-204ENST00000397760 MVPQ14764 893 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-204ENST00000397760 USP16Q9Y5T5 823 aa24.49■■□□□ 1.51
PDLIM2-204ENST00000397760 TMEM57Q8N5G2 664 aa24.48■■□□□ 1.51
PDLIM2-204ENST00000397760 PAPPAQ13219 1627 aa24.48■■□□□ 1.51
PDLIM2-204ENST00000397760 KCPQ6ZWJ8 1503 aa24.47■■□□□ 1.51
PDLIM2-204ENST00000397760 ABCC4O15439 1325 aa24.46■■□□□ 1.51
PDLIM2-204ENST00000397760 ITGB4P16144 1822 aa24.46■■□□□ 1.51
PDLIM2-204ENST00000397760 DOT1LQ8TEK3 1739 aa24.46■■□□□ 1.51
PDLIM2-204ENST00000397760 ITPRIPQ8IWB1 547 aa24.46■■□□□ 1.51
PDLIM2-204ENST00000397760 PHAXQ9H814 394 aaKnown RBP24.46■■□□□ 1.51
PDLIM2-204ENST00000397760 ANXA1P04083 346 aa24.45■■□□□ 1.5
PDLIM2-204ENST00000397760 FKBP5Q13451 457 aaPredicted RBP24.45■■□□□ 1.5
PDLIM2-204ENST00000397760 RBM42Q9BTD8 480 aaKnown RBP24.45■■□□□ 1.5
PDLIM2-204ENST00000397760 DDX21Q9NR30 783 aaKnown RBP eCLIP24.45■■□□□ 1.5
PDLIM2-204ENST00000397760 KCNQ2O43526 872 aa24.44■■□□□ 1.5
PDLIM2-204ENST00000397760 RBM6P78332 1123 aaKnown RBP24.44■■□□□ 1.5
PDLIM2-204ENST00000397760 PROSER3Q2NL68 480 aa24.44■■□□□ 1.5
PDLIM2-204ENST00000397760 RGS12O14924 1447 aa24.43■■□□□ 1.5
PDLIM2-204ENST00000397760 UBR2Q8IWV8 1755 aa24.43■■□□□ 1.5
PDLIM2-204ENST00000397760 PDIA6Q15084 440 aa24.43■■□□□ 1.5
PDLIM2-204ENST00000397760 FAM182BQ5T319 152 aa24.43■■□□□ 1.5
PDLIM2-204ENST00000397760 VSIG10Q8N0Z9 540 aa24.43■■□□□ 1.5
PDLIM2-204ENST00000397760 HYPKQ9NX55 129 aa24.43■■□□□ 1.5
PDLIM2-204ENST00000397760 C5P01031 1676 aa24.43■■□□□ 1.5
PDLIM2-204ENST00000397760 DDX19BQ9UMR2 479 aa24.42■■□□□ 1.5
PDLIM2-204ENST00000397760 BACH2Q9BYV9 841 aa24.41■■□□□ 1.5
PDLIM2-204ENST00000397760 KAT6BQ8WYB5 2073 aa24.41■■□□□ 1.5
PDLIM2-204ENST00000397760 F6X3S4 739 aa24.4■■□□□ 1.5
PDLIM2-204ENST00000397760 TEX13AQ9BXU3 409 aaPredicted RBP24.4■■□□□ 1.5
PDLIM2-204ENST00000397760 MYL6BP14649 208 aa24.4■■□□□ 1.5
PDLIM2-204ENST00000397760 PDE4AP27815 886 aa24.4■■□□□ 1.5
PDLIM2-204ENST00000397760 AAMPQ13685 434 aa24.4■■□□□ 1.5
PDLIM2-204ENST00000397760 INTS3Q68E01 1043 aaKnown RBP24.39■■□□□ 1.49
PDLIM2-204ENST00000397760 DNAJC10Q8IXB1 793 aa24.38■■□□□ 1.49
PDLIM2-204ENST00000397760 ERBB4Q15303 1308 aa24.38■■□□□ 1.49
PDLIM2-204ENST00000397760 KDM2BQ8NHM5 1336 aa24.38■■□□□ 1.49
PDLIM2-204ENST00000397760 SLC4A10Q6U841 1118 aa24.38■■□□□ 1.49
PDLIM2-204ENST00000397760 CENPQQ7L2Z9 268 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-204ENST00000397760 SMARCC1Q92922 1105 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-204ENST00000397760 SLC4A9Q96Q91 983 aa24.38■■□□□ 1.49
PDLIM2-204ENST00000397760 CACNA1FO60840 1977 aa24.37■■□□□ 1.49
PDLIM2-204ENST00000397760 RXRBP28702 533 aa24.37■■□□□ 1.49
PDLIM2-204ENST00000397760 PIP4K2AP48426 406 aaPredicted RBP24.37■■□□□ 1.49
PDLIM2-204ENST00000397760 KRT27Q7Z3Y8 459 aa24.37■■□□□ 1.49
PDLIM2-204ENST00000397760 ZBTB47Q9UFB7 747 aaPredicted RBP24.37■■□□□ 1.49
PDLIM2-204ENST00000397760 A1BGP04217 495 aa24.35■■□□□ 1.49
PDLIM2-204ENST00000397760 RGS17Q9UGC6 210 aaPredicted RBP24.35■■□□□ 1.49
PDLIM2-204ENST00000397760 PI4KAP2A4QPH2 592 aa24.35■■□□□ 1.49
PDLIM2-204ENST00000397760 ZBTB7BO15156 539 aaPredicted RBP24.35■■□□□ 1.49
PDLIM2-204ENST00000397760 STARD3NLO95772 234 aa24.35■■□□□ 1.49
PDLIM2-204ENST00000397760 CCT4P50991 539 aaKnown RBP24.35■■□□□ 1.49
PDLIM2-204ENST00000397760 AIMP1Q12904 312 aaKnown RBP24.35■■□□□ 1.49
PDLIM2-204ENST00000397760 PTF1AQ7RTS3 328 aa24.35■■□□□ 1.49
PDLIM2-204ENST00000397760 LRP10Q7Z4F1 713 aa24.35■■□□□ 1.49
PDLIM2-204ENST00000397760 PI4KAP1Q8N8J0 262 aa24.35■■□□□ 1.49
PDLIM2-204ENST00000397760 CHMP4BQ9H444 224 aaKnown RBP24.35■■□□□ 1.49
PDLIM2-204ENST00000397760 PALLDQ8WX93 1383 aa24.35■■□□□ 1.49
PDLIM2-204ENST00000397760 NBPF26B4DH59 902 aa24.34■■□□□ 1.49
PDLIM2-204ENST00000397760 NBPF14Q5TI25 921 aa24.34■■□□□ 1.49
PDLIM2-204ENST00000397760 NBPF10Q6P3W6 841 aaKnown RBP24.34■■□□□ 1.49
PDLIM2-204ENST00000397760 NBPF15Q8N660 670 aa24.34■■□□□ 1.49
PDLIM2-204ENST00000397760 LAMB4A4D0S4 1761 aa24.33■■□□□ 1.49
PDLIM2-204ENST00000397760 XAGE3Q8WTP9 111 aa24.33■■□□□ 1.49
PDLIM2-204ENST00000397760 ZBTB40Q9NUA8 1239 aa24.33■■□□□ 1.49
PDLIM2-204ENST00000397760 LOC102724428A0A0B4J2F2 783 aa24.33■■□□□ 1.48
PDLIM2-204ENST00000397760 DDX58O95786 925 aaKnown RBP24.33■■□□□ 1.48
PDLIM2-204ENST00000397760 SIK1P57059 783 aa24.33■■□□□ 1.48
PDLIM2-204ENST00000397760 KSR2Q6VAB6 950 aa24.33■■□□□ 1.48
PDLIM2-204ENST00000397760 COPS6Q7L5N1 327 aa24.33■■□□□ 1.48
PDLIM2-204ENST00000397760 DNAAF4Q8WXU2 420 aa24.32■■□□□ 1.48
PDLIM2-204ENST00000397760 ADCY9O60503 1353 aa24.31■■□□□ 1.48
PDLIM2-204ENST00000397760 FAM196AQ6ZSG2 479 aa24.31■■□□□ 1.48
PDLIM2-204ENST00000397760 CYP19A1P11511 503 aaPredicted RBP24.31■■□□□ 1.48
PDLIM2-204ENST00000397760 ATP6V1AP38606 617 aa24.31■■□□□ 1.48
PDLIM2-204ENST00000397760 POTEAQ6S8J7 498 aa24.3■■□□□ 1.48
PDLIM2-204ENST00000397760 MAP3K2Q9Y2U5 619 aa24.3■■□□□ 1.48
PDLIM2-204ENST00000397760 PCDHB15Q9Y5E8 787 aa24.29■■□□□ 1.48
PDLIM2-204ENST00000397760 RIC3Q7Z5B4 369 aa24.28■■□□□ 1.48
PDLIM2-204ENST00000397760 PXDNLA1KZ92 1463 aa24.28■■□□□ 1.48
PDLIM2-204ENST00000397760 NHSQ6T4R5 1651 aa24.27■■□□□ 1.48
PDLIM2-204ENST00000397760 ANKRD13DQ6ZTN6 518 aa24.27■■□□□ 1.48
PDLIM2-204ENST00000397760 SRCIN1Q9C0H9 1055 aa24.27■■□□□ 1.48
PDLIM2-204ENST00000397760 BCL11BQ9C0K0 894 aaPredicted RBP24.27■■□□□ 1.48
PDLIM2-204ENST00000397760 BEND3Q5T5X7 828 aa24.26■■□□□ 1.47
PDLIM2-204ENST00000397760 ITPK1Q13572 414 aa24.26■■□□□ 1.47
PDLIM2-204ENST00000397760 BRWD3Q6RI45 1802 aa24.25■■□□□ 1.47
PDLIM2-204ENST00000397760 MEIS3Q99687 375 aa24.24■■□□□ 1.47
PDLIM2-204ENST00000397760 ZBTB1Q9Y2K1 713 aa24.24■■□□□ 1.47
PDLIM2-204ENST00000397760 ZNF330Q9Y3S2 320 aaPredicted RBP24.24■■□□□ 1.47
PDLIM2-204ENST00000397760 TTLL7Q6ZT98 887 aa24.23■■□□□ 1.47
PDLIM2-204ENST00000397760 PLBD2Q8NHP8 589 aa24.23■■□□□ 1.47
PDLIM2-204ENST00000397760 C1orf115Q9H7X2 142 aa24.23■■□□□ 1.47
PDLIM2-204ENST00000397760 ATP10DQ9P241 1426 aa24.23■■□□□ 1.47
PDLIM2-204ENST00000397760 TJP1Q07157 1748 aa24.22■■□□□ 1.47
PDLIM2-204ENST00000397760 IGHDP01880 384 aa24.22■■□□□ 1.47
PDLIM2-204ENST00000397760 CRKLP46109 303 aaKnown RBP24.21■■□□□ 1.47
PDLIM2-204ENST00000397760 DDRGK1Q96HY6 314 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms