RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 CCT4P50991 539 aaKnown RBP24.11■■□□□ 1.45
TSPAN4-204ENST00000397404 CCDC136Q96JN2 1154 aa24.11■■□□□ 1.45
TSPAN4-204ENST00000397404 ATG3Q9NT62 314 aa24.11■■□□□ 1.45
TSPAN4-204ENST00000397404 CHPF2Q9P2E5 772 aa24.11■■□□□ 1.45
TSPAN4-204ENST00000397404 COG6Q9Y2V7 657 aa24.11■■□□□ 1.45
TSPAN4-204ENST00000397404 RLBP1P12271 317 aa24.1■■□□□ 1.45
TSPAN4-204ENST00000397404 FKBP5Q13451 457 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-204ENST00000397404 SEPT12Q8IYM1 358 aa24.1■■□□□ 1.45
TSPAN4-204ENST00000397404 CLUAP1Q96AJ1 413 aa24.1■■□□□ 1.45
TSPAN4-204ENST00000397404 CICQ96RK0 1608 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-204ENST00000397404 C5P01031 1676 aa24.1■■□□□ 1.45
TSPAN4-204ENST00000397404 STARD3NLO95772 234 aa24.09■■□□□ 1.45
TSPAN4-204ENST00000397404 ITPRIPQ8IWB1 547 aa24.09■■□□□ 1.45
TSPAN4-204ENST00000397404 SYTL4Q96C24 671 aaPredicted RBP24.09■■□□□ 1.45
TSPAN4-204ENST00000397404 ZNF831Q5JPB2 1677 aa24.09■■□□□ 1.45
TSPAN4-204ENST00000397404 IBTKQ9P2D0 1353 aaPredicted RBP24.09■■□□□ 1.45
TSPAN4-204ENST00000397404 RGS12O14924 1447 aa24.08■■□□□ 1.45
TSPAN4-204ENST00000397404 TCERG1O14776 1098 aaKnown RBP24.07■■□□□ 1.44
TSPAN4-204ENST00000397404 TMEM57Q8N5G2 664 aa24.07■■□□□ 1.44
TSPAN4-204ENST00000397404 ASAP1Q9ULH1 1129 aa24.07■■□□□ 1.44
TSPAN4-204ENST00000397404 NHSQ6T4R5 1651 aa24.06■■□□□ 1.44
TSPAN4-204ENST00000397404 PELP1Q8IZL8 1130 aaKnown RBP24.06■■□□□ 1.44
TSPAN4-204ENST00000397404 KAT6BQ8WYB5 2073 aa24.06■■□□□ 1.44
TSPAN4-204ENST00000397404 N4BP2Q86UW6 1770 aaPredicted RBP24.05■■□□□ 1.44
TSPAN4-204ENST00000397404 PTCD1O75127 700 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-204ENST00000397404 NECTIN2Q92692 538 aa24.04■■□□□ 1.44
TSPAN4-204ENST00000397404 USP16Q9Y5T5 823 aa24.04■■□□□ 1.44
TSPAN4-204ENST00000397404 ATP10DQ9P241 1426 aa24.04■■□□□ 1.44
TSPAN4-204ENST00000397404 PDIA6Q15084 440 aa24.03■■□□□ 1.44
TSPAN4-204ENST00000397404 FAM196AQ6ZSG2 479 aa24.03■■□□□ 1.44
TSPAN4-204ENST00000397404 G2E3Q7L622 706 aa24.03■■□□□ 1.44
TSPAN4-204ENST00000397404 KSR2Q6VAB6 950 aa24.02■■□□□ 1.44
TSPAN4-204ENST00000397404 HDAC5Q9UQL6 1122 aa24.02■■□□□ 1.44
TSPAN4-204ENST00000397404 ZBTB40Q9NUA8 1239 aa24.01■■□□□ 1.43
TSPAN4-204ENST00000397404 PRAMEF22A3QJZ6 481 aa24■■□□□ 1.43
TSPAN4-204ENST00000397404 ZBTB7BO15156 539 aaPredicted RBP24■■□□□ 1.43
TSPAN4-204ENST00000397404 RXRBP28702 533 aa24■■□□□ 1.43
TSPAN4-204ENST00000397404 KRT27Q7Z3Y8 459 aa24■■□□□ 1.43
TSPAN4-204ENST00000397404 DNAAF4Q8WXU2 420 aa24■■□□□ 1.43
TSPAN4-204ENST00000397404 ACSBG1Q96GR2 724 aa24■■□□□ 1.43
TSPAN4-204ENST00000397404 RBM42Q9BTD8 480 aaKnown RBP24■■□□□ 1.43
TSPAN4-204ENST00000397404 PALLDQ8WX93 1383 aa24■■□□□ 1.43
TSPAN4-204ENST00000397404 PHAXQ9H814 394 aaKnown RBP24■■□□□ 1.43
TSPAN4-204ENST00000397404 TNNQ9UQP3 1299 aa24■■□□□ 1.43
TSPAN4-204ENST00000397404 GNAI3P08754 354 aa23.98■■□□□ 1.43
TSPAN4-204ENST00000397404 CENPQQ7L2Z9 268 aaPredicted RBP23.98■■□□□ 1.43
TSPAN4-204ENST00000397404 LOC102724428A0A0B4J2F2 783 aa23.97■■□□□ 1.43
TSPAN4-204ENST00000397404 ALDH1L1O75891 902 aa23.97■■□□□ 1.43
TSPAN4-204ENST00000397404 SIK1P57059 783 aa23.97■■□□□ 1.43
TSPAN4-204ENST00000397404 LRP10Q7Z4F1 713 aa23.97■■□□□ 1.43
TSPAN4-204ENST00000397404 SRCIN1Q9C0H9 1055 aa23.97■■□□□ 1.43
TSPAN4-204ENST00000397404 BCL11BQ9C0K0 894 aaPredicted RBP23.97■■□□□ 1.43
TSPAN4-204ENST00000397404 PI4KAP2A4QPH2 592 aa23.96■■□□□ 1.43
TSPAN4-204ENST00000397404 NEXNQ0ZGT2 675 aa23.96■■□□□ 1.43
TSPAN4-204ENST00000397404 B4GALNT3Q6L9W6 998 aa23.96■■□□□ 1.43
TSPAN4-204ENST00000397404 PI4KAP1Q8N8J0 262 aa23.96■■□□□ 1.43
TSPAN4-204ENST00000397404 RWDD1Q9H446 243 aaPredicted RBP23.96■■□□□ 1.43
TSPAN4-204ENST00000397404 SBF2Q86WG5 1849 aa23.96■■□□□ 1.43
TSPAN4-204ENST00000397404 SLC4A10Q6U841 1118 aa23.95■■□□□ 1.42
TSPAN4-204ENST00000397404 ANKRD13DQ6ZTN6 518 aa23.95■■□□□ 1.42
TSPAN4-204ENST00000397404 CYP19A1P11511 503 aaPredicted RBP23.94■■□□□ 1.42
TSPAN4-204ENST00000397404 PROSER3Q2NL68 480 aa23.94■■□□□ 1.42
TSPAN4-204ENST00000397404 NPM2Q86SE8 214 aaKnown RBP23.94■■□□□ 1.42
TSPAN4-204ENST00000397404 DNAJC10Q8IXB1 793 aa23.94■■□□□ 1.42
TSPAN4-204ENST00000397404 PLBD2Q8NHP8 589 aa23.94■■□□□ 1.42
TSPAN4-204ENST00000397404 ADCY9O60503 1353 aa23.94■■□□□ 1.42
TSPAN4-204ENST00000397404 MYL6BP14649 208 aa23.94■■□□□ 1.42
TSPAN4-204ENST00000397404 ATP6V1AP38606 617 aa23.94■■□□□ 1.42
TSPAN4-204ENST00000397404 COPS6Q7L5N1 327 aa23.94■■□□□ 1.42
TSPAN4-204ENST00000397404 RIC3Q7Z5B4 369 aa23.94■■□□□ 1.42
TSPAN4-204ENST00000397404 LINS1Q8NG48 757 aa23.94■■□□□ 1.42
TSPAN4-204ENST00000397404 TJP1Q07157 1748 aa23.93■■□□□ 1.42
TSPAN4-204ENST00000397404 F6X3S4 739 aa23.93■■□□□ 1.42
TSPAN4-204ENST00000397404 KCNQ2O43526 872 aa23.93■■□□□ 1.42
TSPAN4-204ENST00000397404 IL6STP40189 918 aaPredicted RBP23.93■■□□□ 1.42
TSPAN4-204ENST00000397404 HDAC1Q13547 482 aaPredicted RBP23.93■■□□□ 1.42
TSPAN4-204ENST00000397404 XAGE3Q8WTP9 111 aa23.93■■□□□ 1.42
TSPAN4-204ENST00000397404 BTAF1O14981 1849 aa23.93■■□□□ 1.42
TSPAN4-204ENST00000397404 BEND3Q5T5X7 828 aa23.92■■□□□ 1.42
TSPAN4-204ENST00000397404 MAP3K2Q9Y2U5 619 aa23.92■■□□□ 1.42
TSPAN4-204ENST00000397404 NBPF26B4DH59 902 aa23.91■■□□□ 1.42
TSPAN4-204ENST00000397404 NBPF14Q5TI25 921 aa23.91■■□□□ 1.42
TSPAN4-204ENST00000397404 NBPF10Q6P3W6 841 aaKnown RBP23.91■■□□□ 1.42
TSPAN4-204ENST00000397404 RPAP2Q8IXW5 612 aaPredicted RBP23.91■■□□□ 1.42
TSPAN4-204ENST00000397404 NBPF15Q8N660 670 aa23.91■■□□□ 1.42
TSPAN4-204ENST00000397404 BRWD3Q6RI45 1802 aa23.91■■□□□ 1.42
TSPAN4-204ENST00000397404 RGL2O15211 777 aa23.9■■□□□ 1.42
TSPAN4-204ENST00000397404 ANXA1P04083 346 aa23.9■■□□□ 1.42
TSPAN4-204ENST00000397404 SLC4A9Q96Q91 983 aa23.9■■□□□ 1.42
TSPAN4-204ENST00000397404 METTL22Q9BUU2 404 aaPredicted RBP23.9■■□□□ 1.42
TSPAN4-204ENST00000397404 RREB1Q92766 1687 aa23.9■■□□□ 1.42
TSPAN4-204ENST00000397404 A1BGP04217 495 aa23.89■■□□□ 1.42
TSPAN4-204ENST00000397404 KDM2BQ8NHM5 1336 aa23.89■■□□□ 1.41
TSPAN4-204ENST00000397404 AIMP1Q12904 312 aaKnown RBP23.88■■□□□ 1.41
TSPAN4-204ENST00000397404 RC3H1Q5TC82 1133 aaKnown RBP23.88■■□□□ 1.41
TSPAN4-204ENST00000397404 KIF6Q6ZMV9 814 aa23.88■■□□□ 1.41
TSPAN4-204ENST00000397404 CCDC87Q9NVE4 849 aa23.88■■□□□ 1.41
TSPAN4-204ENST00000397404 GNAI2P04899 355 aa23.87■■□□□ 1.41
TSPAN4-204ENST00000397404 HSP90AB3PQ58FF7 597 aa23.87■■□□□ 1.41
TSPAN4-204ENST00000397404 CNTNAP4Q9C0A0 1308 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms