RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 MPHOSPH8Q99549 860 aa11.9□□□□□ -0.5
COL4A4-201ENST00000396625 NLRP2Q9NX02 1062 aa11.9□□□□□ -0.5
COL4A4-201ENST00000396625 CETN1Q12798 172 aa11.9□□□□□ -0.5
COL4A4-201ENST00000396625 TMC6Q7Z403 805 aa11.9□□□□□ -0.5
COL4A4-201ENST00000396625 ACTN2P35609 894 aa11.9□□□□□ -0.5
COL4A4-201ENST00000396625 NOP2P46087 812 aaKnown RBP11.9□□□□□ -0.51
COL4A4-201ENST00000396625 GTPBP4Q9BZE4 634 aaKnown RBP11.9□□□□□ -0.51
COL4A4-201ENST00000396625 ZMYND15Q9H091 742 aa11.89□□□□□ -0.51
COL4A4-201ENST00000396625 NAA25Q14CX7 972 aa11.89□□□□□ -0.51
COL4A4-201ENST00000396625 FEZ2Q9UHY8 353 aaPredicted RBP11.89□□□□□ -0.51
COL4A4-201ENST00000396625 CEP120Q8N960 986 aa11.89□□□□□ -0.51
COL4A4-201ENST00000396625 ARFGAP3Q9NP61 516 aa11.89□□□□□ -0.51
COL4A4-201ENST00000396625 CTAGE5O15320 804 aa11.89□□□□□ -0.51
COL4A4-201ENST00000396625 TTC14Q96N46 770 aa11.89□□□□□ -0.51
COL4A4-201ENST00000396625 SCAND2PQ9GZW5 306 aaPredicted RBP11.89□□□□□ -0.51
COL4A4-201ENST00000396625 SPINK5Q9NQ38 1064 aaPredicted RBP11.88□□□□□ -0.51
COL4A4-201ENST00000396625 CCDC7Q96M83 1385 aa11.88□□□□□ -0.51
COL4A4-201ENST00000396625 TTC36A6NLP5 189 aa11.88□□□□□ -0.51
COL4A4-201ENST00000396625 ODF2LQ9ULJ1 636 aa11.88□□□□□ -0.51
COL4A4-201ENST00000396625 CCDC12Q8WUD4 166 aaPredicted RBP11.88□□□□□ -0.51
COL4A4-201ENST00000396625 KIF5BP33176 963 aa11.88□□□□□ -0.51
COL4A4-201ENST00000396625 GBP6Q6ZN66 633 aa11.88□□□□□ -0.51
COL4A4-201ENST00000396625 CHD1LQ86WJ1 897 aa11.88□□□□□ -0.51
COL4A4-201ENST00000396625 KIAA0753Q2KHM9 967 aa11.88□□□□□ -0.51
COL4A4-201ENST00000396625 BACH2Q9BYV9 841 aa11.88□□□□□ -0.51
COL4A4-201ENST00000396625 TMEM266Q2M3C6 531 aa11.88□□□□□ -0.51
COL4A4-201ENST00000396625 RAB34Q9BZG1 259 aa11.88□□□□□ -0.51
COL4A4-201ENST00000396625 SPTY2D1Q68D10 685 aaPredicted RBP11.87□□□□□ -0.51
COL4A4-201ENST00000396625 MICALL1Q8N3F8 863 aa11.87□□□□□ -0.51
COL4A4-201ENST00000396625 DCAF8L1A6NGE4 600 aa11.87□□□□□ -0.51
COL4A4-201ENST00000396625 MCM5P33992 734 aa11.87□□□□□ -0.51
COL4A4-201ENST00000396625 CHMP4BP1P59074 171 aa11.87□□□□□ -0.51
COL4A4-201ENST00000396625 IFI16Q16666 785 aaKnown RBP11.87□□□□□ -0.51
COL4A4-201ENST00000396625 SMC1BQ8NDV3 1235 aa11.87□□□□□ -0.51
COL4A4-201ENST00000396625 U3KPZ7 1027 aaPredicted RBP11.87□□□□□ -0.51
COL4A4-201ENST00000396625 SARNPP82979 210 aaKnown RBP11.87□□□□□ -0.51
COL4A4-201ENST00000396625 ARID4AP29374 1257 aaPredicted RBP11.87□□□□□ -0.51
COL4A4-201ENST00000396625 STIM2Q9P246 746 aa11.87□□□□□ -0.51
COL4A4-201ENST00000396625 KIF5AQ12840 1032 aa11.87□□□□□ -0.51
COL4A4-201ENST00000396625 OTUD6BQ8N6M0 293 aa11.87□□□□□ -0.51
COL4A4-201ENST00000396625 ADCY5O95622 1261 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 PLVAPQ9BX97 442 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 FAM184BQ9ULE4 1060 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 MTIF2P46199 727 aaKnown RBP11.86□□□□□ -0.51
COL4A4-201ENST00000396625 MAP3K9P80192 1104 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 NUTM2GQ5VZR2 741 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 PUF60Q9UHX1 559 aaKnown RBP11.86□□□□□ -0.51
COL4A4-201ENST00000396625 CKAP2LQ8IYA6 745 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 CPLX3Q8WVH0 158 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 PRIMPOLQ96LW4 560 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 ZSWIM4Q9H7M6 989 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 EPSTI1Q96J88 318 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 TACC1O75410 805 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 SYNCQ9H7C4 482 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 PPP1R1BQ9UD71 204 aaPredicted RBP11.86□□□□□ -0.51
COL4A4-201ENST00000396625 ATRIPQ8WXE1 791 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 MCM6Q14566 821 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 GAS2L2Q8NHY3 880 aa11.86□□□□□ -0.51
COL4A4-201ENST00000396625 LRRC45Q96CN5 670 aa11.85□□□□□ -0.51
COL4A4-201ENST00000396625 CCDC63Q8NA47 563 aa11.85□□□□□ -0.51
COL4A4-201ENST00000396625 ZNF287Q9HBT7 754 aa11.85□□□□□ -0.51
COL4A4-201ENST00000396625 OPA1O60313 960 aa11.85□□□□□ -0.51
COL4A4-201ENST00000396625 AIDAQ96BJ3 306 aa11.85□□□□□ -0.51
COL4A4-201ENST00000396625 ZSCAN29Q8IWY8 852 aaPredicted RBP11.85□□□□□ -0.51
COL4A4-201ENST00000396625 CAPN2P17655 700 aa11.85□□□□□ -0.51
COL4A4-201ENST00000396625 USP25Q9UHP3 1055 aa11.85□□□□□ -0.51
COL4A4-201ENST00000396625 TWISTNBQ3B726 338 aaPredicted RBP11.85□□□□□ -0.51
COL4A4-201ENST00000396625 CTAGE9A4FU28 777 aa11.85□□□□□ -0.51
COL4A4-201ENST00000396625 SEPT14Q6ZU15 432 aa11.85□□□□□ -0.51
COL4A4-201ENST00000396625 LRP2BPQ9P2M1 347 aa11.85□□□□□ -0.51
COL4A4-201ENST00000396625 MYO1BO43795 1136 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 PDE3AQ14432 1141 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 GBP7Q8N8V2 638 aaPredicted RBP11.84□□□□□ -0.51
COL4A4-201ENST00000396625 TBC1D5Q92609 795 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 TTC12Q9H892 705 aaPredicted RBP11.84□□□□□ -0.51
COL4A4-201ENST00000396625 FERMT3Q86UX7 667 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 C8orf76Q96K31 380 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 SUDS3Q9H7L9 328 aaPredicted RBP11.84□□□□□ -0.51
COL4A4-201ENST00000396625 TMEM87AQ8NBN3 555 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 CNNM3Q8NE01 707 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 STMN2Q93045 179 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 GMNNO75496 209 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 ZNF428Q96B54 188 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 A0A087WZG4 1122 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 KIF20AO95235 890 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 ATP11AP98196 1134 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 CCDC174Q6PII3 467 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 SMARCA4P51532 1647 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 SUPT6HQ7KZ85 1726 aaKnown RBP11.84□□□□□ -0.51
COL4A4-201ENST00000396625 CCDC129Q6ZRS4 1044 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 CCDC114Q96M63 670 aa11.84□□□□□ -0.51
COL4A4-201ENST00000396625 CIB2O75838 187 aa11.83□□□□□ -0.51
COL4A4-201ENST00000396625 GNG11P61952 73 aa11.83□□□□□ -0.51
COL4A4-201ENST00000396625 SLU7O95391 586 aaKnown RBP11.83□□□□□ -0.52
COL4A4-201ENST00000396625 CCDC40Q4G0X9 1142 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 EBAG9O00559 213 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 SLC4A2P04920 1241 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 DZIP1Q86YF9 867 aaKnown RBP11.83□□□□□ -0.52
COL4A4-201ENST00000396625 SH2B1Q9NRF2 756 aaPredicted RBP11.83□□□□□ -0.52
COL4A4-201ENST00000396625 FAM114A2Q9NRY5 505 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms