RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 CHMP4AQ9BY43 222 aa20.35■□□□□ 0.85
TRIM39-205ENST00000396551 BRPF3Q9ULD4 1205 aa20.35■□□□□ 0.85
TRIM39-205ENST00000396551 DBF4Q9UBU7 674 aaPredicted RBP20.35■□□□□ 0.85
TRIM39-205ENST00000396551 HSP90AA1P07900 732 aaKnown RBP20.34■□□□□ 0.85
TRIM39-205ENST00000396551 IL1RAPL2Q9NP60 686 aa20.34■□□□□ 0.85
TRIM39-205ENST00000396551 SCN11AQ9UI33 1791 aa20.34■□□□□ 0.85
TRIM39-205ENST00000396551 UNC5CLQ8IV45 518 aa20.32■□□□□ 0.84
TRIM39-205ENST00000396551 SURF6O75683 361 aaKnown RBP20.32■□□□□ 0.84
TRIM39-205ENST00000396551 ATF3P18847 181 aa20.32■□□□□ 0.84
TRIM39-205ENST00000396551 ESYT1Q9BSJ8 1104 aa20.32■□□□□ 0.84
TRIM39-205ENST00000396551 AK9Q5TCS8 1911 aa20.32■□□□□ 0.84
TRIM39-205ENST00000396551 SRGAP3O43295 1099 aa20.32■□□□□ 0.84
TRIM39-205ENST00000396551 TRAK2O60296 914 aa20.32■□□□□ 0.84
TRIM39-205ENST00000396551 C5P01031 1676 aa20.31■□□□□ 0.84
TRIM39-205ENST00000396551 RAB11FIP3O75154 756 aa20.31■□□□□ 0.84
TRIM39-205ENST00000396551 NUTM1Q86Y26 1132 aa20.31■□□□□ 0.84
TRIM39-205ENST00000396551 KDM6AO15550 1401 aaPredicted RBP20.31■□□□□ 0.84
TRIM39-205ENST00000396551 DCCP43146 1447 aa20.31■□□□□ 0.84
TRIM39-205ENST00000396551 AOX1Q06278 1338 aa20.31■□□□□ 0.84
TRIM39-205ENST00000396551 CHMLP26374 656 aa20.31■□□□□ 0.84
TRIM39-205ENST00000396551 RHPN1Q8TCX5 695 aa20.31■□□□□ 0.84
TRIM39-205ENST00000396551 UBE2Q2Q8WVN8 375 aa20.31■□□□□ 0.84
TRIM39-205ENST00000396551 MAP3K2Q9Y2U5 619 aa20.31■□□□□ 0.84
TRIM39-205ENST00000396551 DDX11L8A8MPP1 907 aa20.3■□□□□ 0.84
TRIM39-205ENST00000396551 RILPL2Q969X0 211 aa20.3■□□□□ 0.84
TRIM39-205ENST00000396551 MEGF6O75095 1541 aa20.3■□□□□ 0.84
TRIM39-205ENST00000396551 TRIM6-TRIM34B2RNG4 842 aa20.3■□□□□ 0.84
TRIM39-205ENST00000396551 NLRP2Q9NX02 1062 aa20.29■□□□□ 0.84
TRIM39-205ENST00000396551 KSR2Q6VAB6 950 aa20.29■□□□□ 0.84
TRIM39-205ENST00000396551 CABLES1Q8TDN4 633 aa20.28■□□□□ 0.84
TRIM39-205ENST00000396551 SSFA2P28290 1259 aa20.28■□□□□ 0.84
TRIM39-205ENST00000396551 RAPGEF4Q8WZA2 1011 aa20.28■□□□□ 0.84
TRIM39-205ENST00000396551 GZF1Q9H116 711 aaPredicted RBP20.28■□□□□ 0.84
TRIM39-205ENST00000396551 NPHP3Q7Z494 1330 aa20.27■□□□□ 0.84
TRIM39-205ENST00000396551 PDIA6Q15084 440 aa20.27■□□□□ 0.84
TRIM39-205ENST00000396551 PI4K2BQ8TCG2 481 aa20.27■□□□□ 0.84
TRIM39-205ENST00000396551 KIF1BPQ96EK5 621 aa20.27■□□□□ 0.84
TRIM39-205ENST00000396551 ALDH1L1O75891 902 aa20.27■□□□□ 0.83
TRIM39-205ENST00000396551 SLC39A6Q13433 755 aa20.27■□□□□ 0.83
TRIM39-205ENST00000396551 MTX1Q13505 466 aa20.26■□□□□ 0.83
TRIM39-205ENST00000396551 CWF19L2Q2TBE0 894 aaKnown RBP20.26■□□□□ 0.83
TRIM39-205ENST00000396551 TNS3Q68CZ2 1445 aa20.26■□□□□ 0.83
TRIM39-205ENST00000396551 PHKG2P15735 406 aa20.26■□□□□ 0.83
TRIM39-205ENST00000396551 GBP4Q96PP9 640 aa20.26■□□□□ 0.83
TRIM39-205ENST00000396551 SLC52A2Q9HAB3 445 aa20.26■□□□□ 0.83
TRIM39-205ENST00000396551 HYPKQ9NX55 129 aa20.26■□□□□ 0.83
TRIM39-205ENST00000396551 ABCC6O95255 1503 aa20.26■□□□□ 0.83
TRIM39-205ENST00000396551 ST18O60284 1047 aa20.25■□□□□ 0.83
TRIM39-205ENST00000396551 IL25Q9H293 177 aa20.25■□□□□ 0.83
TRIM39-205ENST00000396551 ZNF790Q6PG37 636 aa20.25■□□□□ 0.83
TRIM39-205ENST00000396551 DDX21Q9NR30 783 aaKnown RBP eCLIP20.25■□□□□ 0.83
TRIM39-205ENST00000396551 TATP17735 454 aaPredicted RBP20.25■□□□□ 0.83
TRIM39-205ENST00000396551 PALD1Q9ULE6 856 aa20.25■□□□□ 0.83
TRIM39-205ENST00000396551 XIRP1Q702N8 1843 aaKnown RBP20.25■□□□□ 0.83
TRIM39-205ENST00000396551 CHRNA2Q15822 529 aa20.24■□□□□ 0.83
TRIM39-205ENST00000396551 MAP4K4O95819 1239 aaPredicted RBP20.23■□□□□ 0.83
TRIM39-205ENST00000396551 C9orf78Q9NZ63 289 aaPredicted RBP20.23■□□□□ 0.83
TRIM39-205ENST00000396551 PKD1L3Q7Z443 1732 aa20.23■□□□□ 0.83
TRIM39-205ENST00000396551 FSD2A1L4K1 749 aa20.23■□□□□ 0.83
TRIM39-205ENST00000396551 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
TRIM39-205ENST00000396551 ANO2Q9NQ90 1003 aa20.23■□□□□ 0.83
TRIM39-205ENST00000396551 CLEC17AQ6ZS10 378 aa20.22■□□□□ 0.83
TRIM39-205ENST00000396551 SPG7Q9UQ90 795 aa20.22■□□□□ 0.83
TRIM39-205ENST00000396551 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
TRIM39-205ENST00000396551 CADPS2Q86UW7 1296 aa20.22■□□□□ 0.83
TRIM39-205ENST00000396551 HSP90AB4PQ58FF6 505 aa20.21■□□□□ 0.83
TRIM39-205ENST00000396551 ZGPATQ8N5A5 531 aaKnown RBP20.21■□□□□ 0.83
TRIM39-205ENST00000396551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.21■□□□□ 0.83
TRIM39-205ENST00000396551 MRC1P22897 1456 aa20.21■□□□□ 0.83
TRIM39-205ENST00000396551 CYP2E1P05181 493 aaPredicted RBP20.21■□□□□ 0.83
TRIM39-205ENST00000396551 LINS1Q8NG48 757 aa20.21■□□□□ 0.83
TRIM39-205ENST00000396551 KAZALD1Q96I82 304 aa20.21■□□□□ 0.83
TRIM39-205ENST00000396551 SPATA31A3Q5VYP0 1347 aa20.21■□□□□ 0.83
TRIM39-205ENST00000396551 CSB-PGBD3P0DP91 1061 aa20.21■□□□□ 0.83
TRIM39-205ENST00000396551 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.21■□□□□ 0.83
TRIM39-205ENST00000396551 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
TRIM39-205ENST00000396551 L1TD1Q5T7N2 865 aaKnown RBP20.2■□□□□ 0.82
TRIM39-205ENST00000396551 IFNL2Q8IZJ0 200 aa20.2■□□□□ 0.82
TRIM39-205ENST00000396551 SUCLG2Q96I99 432 aa20.2■□□□□ 0.82
TRIM39-205ENST00000396551 PA2G4Q9UQ80 394 aaKnown RBP20.2■□□□□ 0.82
TRIM39-205ENST00000396551 UTYO14607 1347 aa20.2■□□□□ 0.82
TRIM39-205ENST00000396551 CYP27B1O15528 508 aa20.2■□□□□ 0.82
TRIM39-205ENST00000396551 NEK4P51957 841 aa20.2■□□□□ 0.82
TRIM39-205ENST00000396551 PKP1Q13835 747 aa20.19■□□□□ 0.82
TRIM39-205ENST00000396551 GRM8O00222 908 aa20.19■□□□□ 0.82
TRIM39-205ENST00000396551 HSPA2P54652 639 aa20.19■□□□□ 0.82
TRIM39-205ENST00000396551 IL17RAQ96F46 866 aa20.19■□□□□ 0.82
TRIM39-205ENST00000396551 IGKV5-2P06315 115 aa20.19■□□□□ 0.82
TRIM39-205ENST00000396551 ZNF496Q96IT1 587 aaPredicted RBP20.19■□□□□ 0.82
TRIM39-205ENST00000396551 BAG4O95429 457 aaKnown RBP20.18■□□□□ 0.82
TRIM39-205ENST00000396551 DDX58O95786 925 aaKnown RBP20.18■□□□□ 0.82
TRIM39-205ENST00000396551 MCCP23508 829 aa20.18■□□□□ 0.82
TRIM39-205ENST00000396551 ANAPC15P60006 121 aa20.18■□□□□ 0.82
TRIM39-205ENST00000396551 OS9Q13438 667 aaPredicted RBP20.18■□□□□ 0.82
TRIM39-205ENST00000396551 GOLGA6L3A6NEY3 463 aa20.18■□□□□ 0.82
TRIM39-205ENST00000396551 CWC22Q9HCG8 908 aaKnown RBP20.17■□□□□ 0.82
TRIM39-205ENST00000396551 RTN4Q9NQC3 1192 aaKnown RBP20.17■□□□□ 0.82
TRIM39-205ENST00000396551 MYL6BP14649 208 aa20.17■□□□□ 0.82
TRIM39-205ENST00000396551 NUCB2P80303 420 aa20.17■□□□□ 0.82
TRIM39-205ENST00000396551 ARXQ96QS3 562 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms