RNA–Protein interactions for RNA: ENST00000395936.5

PMP22-202, Transcript of peripheral myelin protein 22, humanhuman

TSL 3 BASIC

Gene PMP22, Length 816 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-202ENST00000395936 CFAP53Q96M91 514 aa22.73■■□□□ 1.23
PMP22-202ENST00000395936 PIM2Q9P1W9 311 aa22.73■■□□□ 1.23
PMP22-202ENST00000395936 ZBTB1Q9Y2K1 713 aa22.73■■□□□ 1.23
PMP22-202ENST00000395936 UBR2Q8IWV8 1755 aa22.72■■□□□ 1.23
PMP22-202ENST00000395936 STARD3NLO95772 234 aa22.71■■□□□ 1.23
PMP22-202ENST00000395936 TEFQ10587 303 aa22.71■■□□□ 1.23
PMP22-202ENST00000395936 ARHGAP27Q6ZUM4 889 aa22.71■■□□□ 1.23
PMP22-202ENST00000395936 COL15A1P39059 1388 aa22.71■■□□□ 1.23
PMP22-202ENST00000395936 ZNF790Q6PG37 636 aa22.7■■□□□ 1.22
PMP22-202ENST00000395936 ZNF496Q96IT1 587 aaPredicted RBP22.69■■□□□ 1.22
PMP22-202ENST00000395936 PHACTR3Q96KR7 559 aa22.69■■□□□ 1.22
PMP22-202ENST00000395936 TEX13AQ9BXU3 409 aaPredicted RBP22.69■■□□□ 1.22
PMP22-202ENST00000395936 RSPH6AQ9H0K4 717 aa22.69■■□□□ 1.22
PMP22-202ENST00000395936 NUDCQ9Y266 331 aa22.69■■□□□ 1.22
PMP22-202ENST00000395936 PRKAR2BP31323 418 aa22.68■■□□□ 1.22
PMP22-202ENST00000395936 NFIXQ14938 502 aa22.68■■□□□ 1.22
PMP22-202ENST00000395936 DALRD3Q5D0E6 543 aaKnown RBP22.68■■□□□ 1.22
PMP22-202ENST00000395936 CEMIPQ8WUJ3 1361 aa22.67■■□□□ 1.22
PMP22-202ENST00000395936 HEG1Q9ULI3 1381 aa22.67■■□□□ 1.22
PMP22-202ENST00000395936 ARFGEF1Q9Y6D6 1849 aa22.67■■□□□ 1.22
PMP22-202ENST00000395936 CANXP27824 592 aaKnown RBP22.67■■□□□ 1.22
PMP22-202ENST00000395936 PPP2R1AP30153 589 aa22.67■■□□□ 1.22
PMP22-202ENST00000395936 EIF5P55010 431 aaKnown RBP22.67■■□□□ 1.22
PMP22-202ENST00000395936 BCL2L12Q9HB09 334 aa22.67■■□□□ 1.22
PMP22-202ENST00000395936 SIPA1L3O60292 1781 aaPredicted RBP22.66■■□□□ 1.22
PMP22-202ENST00000395936 CHRNA5P30532 468 aa22.66■■□□□ 1.22
PMP22-202ENST00000395936 A0A087WZG4 1122 aa22.65■■□□□ 1.22
PMP22-202ENST00000395936 KIF3CO14782 793 aa22.64■■□□□ 1.21
PMP22-202ENST00000395936 FMNL2Q96PY5 1086 aa22.64■■□□□ 1.21
PMP22-202ENST00000395936 NRXN2Q9P2S2 1712 aa22.63■■□□□ 1.21
PMP22-202ENST00000395936 SERPINB2P05120 415 aa22.63■■□□□ 1.21
PMP22-202ENST00000395936 U2AF1L5P0DN76 240 aaPredicted RBP22.63■■□□□ 1.21
PMP22-202ENST00000395936 U2AF1Q01081 240 aaKnown RBP eCLIP22.63■■□□□ 1.21
PMP22-202ENST00000395936 AFDNP55196 1824 aaKnown RBP22.63■■□□□ 1.21
PMP22-202ENST00000395936 BTBD11A6QL63 1104 aa22.62■■□□□ 1.21
PMP22-202ENST00000395936 IL6STP40189 918 aaPredicted RBP22.61■■□□□ 1.21
PMP22-202ENST00000395936 C9orf131Q5VYM1 1079 aa22.61■■□□□ 1.21
PMP22-202ENST00000395936 KCNQ3O43525 872 aa22.59■■□□□ 1.21
PMP22-202ENST00000395936 HSPA6P17066 643 aa22.59■■□□□ 1.21
PMP22-202ENST00000395936 A1BGP04217 495 aa22.58■■□□□ 1.21
PMP22-202ENST00000395936 RTF1Q92541 710 aaKnown RBP22.58■■□□□ 1.21
PMP22-202ENST00000395936 HTATSF1O43719 755 aaKnown RBP22.57■■□□□ 1.2
PMP22-202ENST00000395936 TBC1D9BQ66K14 1250 aa22.57■■□□□ 1.2
PMP22-202ENST00000395936 BICDL1Q6ZP65 573 aa22.57■■□□□ 1.2
PMP22-202ENST00000395936 TBC1D2BQ9UPU7 963 aa22.57■■□□□ 1.2
PMP22-202ENST00000395936 TOMM70O94826 608 aa22.56■■□□□ 1.2
PMP22-202ENST00000395936 NPM2Q86SE8 214 aaKnown RBP22.56■■□□□ 1.2
PMP22-202ENST00000395936 H0YIN7 160 aa22.55■■□□□ 1.2
PMP22-202ENST00000395936 MCM10Q7L590 875 aa22.55■■□□□ 1.2
PMP22-202ENST00000395936 TTLL6Q8N841 843 aa22.55■■□□□ 1.2
PMP22-202ENST00000395936 ZNF330Q9Y3S2 320 aaPredicted RBP22.55■■□□□ 1.2
PMP22-202ENST00000395936 USP16Q9Y5T5 823 aa22.55■■□□□ 1.2
PMP22-202ENST00000395936 C2CD5Q86YS7 1000 aa22.54■■□□□ 1.2
PMP22-202ENST00000395936 RNF181Q9P0P0 153 aa22.54■■□□□ 1.2
PMP22-202ENST00000395936 DLEC1Q9Y238 1755 aa22.53■■□□□ 1.2
PMP22-202ENST00000395936 SCN7AQ01118 1682 aa22.53■■□□□ 1.2
PMP22-202ENST00000395936 SNRPA1P09661 255 aaKnown RBP22.53■■□□□ 1.2
PMP22-202ENST00000395936 NMRK2Q9NPI5 230 aa22.53■■□□□ 1.2
PMP22-202ENST00000395936 PDZRN3Q9UPQ7 1066 aa22.53■■□□□ 1.2
PMP22-202ENST00000395936 CARMIL3Q8ND23 1372 aa22.52■■□□□ 1.2
PMP22-202ENST00000395936 SBF1O95248 1867 aa22.52■■□□□ 1.2
PMP22-202ENST00000395936 CAMTA2O94983 1202 aa22.52■■□□□ 1.2
PMP22-202ENST00000395936 BRIP1Q9BX63 1249 aa22.52■■□□□ 1.2
PMP22-202ENST00000395936 PDE6BP35913 854 aa22.51■■□□□ 1.19
PMP22-202ENST00000395936 DCTN1Q14203 1278 aa22.51■■□□□ 1.19
PMP22-202ENST00000395936 SETDB2Q96T68 719 aa22.51■■□□□ 1.19
PMP22-202ENST00000395936 KDM2BQ8NHM5 1336 aa22.51■■□□□ 1.19
PMP22-202ENST00000395936 PRAMEF22A3QJZ6 481 aa22.5■■□□□ 1.19
PMP22-202ENST00000395936 PRR5LQ6MZQ0 368 aa22.5■■□□□ 1.19
PMP22-202ENST00000395936 DZIP3Q86Y13 1208 aaKnown RBP22.5■■□□□ 1.19
PMP22-202ENST00000395936 TAF7Q15545 349 aaPredicted RBP22.49■■□□□ 1.19
PMP22-202ENST00000395936 ZC3H4Q9UPT8 1303 aaKnown RBP22.49■■□□□ 1.19
PMP22-202ENST00000395936 NEFMP07197 916 aa22.48■■□□□ 1.19
PMP22-202ENST00000395936 LMNB1P20700 586 aa22.48■■□□□ 1.19
PMP22-202ENST00000395936 CLEC4GQ6UXB4 293 aa22.48■■□□□ 1.19
PMP22-202ENST00000395936 CEP350Q5VT06 3117 aa22.48■■□□□ 1.19
PMP22-202ENST00000395936 RASSF7Q02833 373 aa22.47■■□□□ 1.19
PMP22-202ENST00000395936 RBM46Q8TBY0 533 aaKnown RBP22.47■■□□□ 1.19
PMP22-202ENST00000395936 ANKRD31Q8N7Z5 1873 aa22.47■■□□□ 1.19
PMP22-202ENST00000395936 PIP4K2AP48426 406 aaPredicted RBP22.46■■□□□ 1.19
PMP22-202ENST00000395936 CNBD1Q8NA66 436 aa22.46■■□□□ 1.19
PMP22-202ENST00000395936 ZNF622Q969S3 477 aaKnown RBP eCLIP22.46■■□□□ 1.19
PMP22-202ENST00000395936 PLEKHF1Q96S99 279 aa22.46■■□□□ 1.19
PMP22-202ENST00000395936 BCORQ6W2J9 1755 aa22.45■■□□□ 1.19
PMP22-202ENST00000395936 RGL2O15211 777 aa22.45■■□□□ 1.18
PMP22-202ENST00000395936 APLP1P51693 650 aa22.45■■□□□ 1.18
PMP22-202ENST00000395936 C16orf71Q8IYS4 520 aaPredicted RBP22.45■■□□□ 1.18
PMP22-202ENST00000395936 CCDC24Q8N4L8 307 aa22.45■■□□□ 1.18
PMP22-202ENST00000395936 PRELPP51888 382 aa22.44■■□□□ 1.18
PMP22-202ENST00000395936 ST5P78524 1137 aa22.44■■□□□ 1.18
PMP22-202ENST00000395936 RRAGCQ9HB90 399 aa22.44■■□□□ 1.18
PMP22-202ENST00000395936 ZNF652Q9Y2D9 606 aa22.44■■□□□ 1.18
PMP22-202ENST00000395936 NBPF26B4DH59 902 aa22.43■■□□□ 1.18
PMP22-202ENST00000395936 NPHP1O15259 732 aa22.43■■□□□ 1.18
PMP22-202ENST00000395936 NBPF10Q6P3W6 841 aaKnown RBP22.43■■□□□ 1.18
PMP22-202ENST00000395936 NBPF15Q8N660 670 aa22.43■■□□□ 1.18
PMP22-202ENST00000395936 PNISRQ8TF01 805 aaKnown RBP22.43■■□□□ 1.18
PMP22-202ENST00000395936 PNNQ9H307 717 aaKnown RBP22.43■■□□□ 1.18
PMP22-202ENST00000395936 MIS18AQ9NYP9 233 aa22.43■■□□□ 1.18
PMP22-202ENST00000395936 NFKBIEO00221 500 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms