RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 ZGPATQ8N5A5 531 aaKnown RBP6.12□□□□□ -1.43
FGD4-201ENST00000395740 CHMP4AQ9BY43 222 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 C1orf115Q9H7X2 142 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 DIAPH3Q9NSV4 1193 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 CCDC171Q6TFL3 1326 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 MSH6P52701 1360 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 USP31Q70CQ4 1352 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 UBE2HP62256 183 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 XPCQ01831 940 aaPredicted RBP6.12□□□□□ -1.43
FGD4-201ENST00000395740 NOLC1Q14978 699 aaKnown RBP eCLIP6.12□□□□□ -1.43
FGD4-201ENST00000395740 TAF3Q5VWG9 929 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 A2ML1A8K2U0 1454 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 RAB11FIP3O75154 756 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 HSPA4P34932 840 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 NEK4P51957 841 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 TAF7LQ5H9L4 462 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.12□□□□□ -1.43
FGD4-201ENST00000395740 MINK1Q8N4C8 1332 aaPredicted RBP6.11□□□□□ -1.43
FGD4-201ENST00000395740 OVOS2A0A0J9YW53 1432 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 OVOS2Q6IE36 1432 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 ADGRL3Q9HAR2 1447 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 GOLGA6L6A8MZA4 724 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 WASLO00401 505 aaPredicted RBP6.11□□□□□ -1.43
FGD4-201ENST00000395740 GNAI2P04899 355 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 CHMLP26374 656 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 ATP8B2P98198 1209 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 PKP1Q13835 747 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 PDCL2Q8N4E4 241 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 COG3Q96JB2 828 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 FEZ1Q99689 392 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 ESF1Q9H501 851 aaKnown RBP6.11□□□□□ -1.43
FGD4-201ENST00000395740 FAM13BQ9NYF5 915 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.11□□□□□ -1.43
FGD4-201ENST00000395740 KDM4AO75164 1064 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 AEBP1Q8IUX7 1158 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 C16orf71Q8IYS4 520 aaPredicted RBP6.11□□□□□ -1.43
FGD4-201ENST00000395740 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.11□□□□□ -1.43
FGD4-201ENST00000395740 KCNB2Q92953 911 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 ZSCAN31Q96LW9 406 aaPredicted RBP6.11□□□□□ -1.43
FGD4-201ENST00000395740 FUCA2Q9BTY2 467 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 TM6SF1Q9BZW5 370 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 LRRCC1Q9C099 1032 aa6.11□□□□□ -1.43
FGD4-201ENST00000395740 RBM27Q9P2N5 1060 aaKnown RBP6.11□□□□□ -1.43
FGD4-201ENST00000395740 USP42Q9H9J4 1324 aaKnown RBP6.1□□□□□ -1.43
FGD4-201ENST00000395740 KDRP35968 1356 aa6.1□□□□□ -1.43
FGD4-201ENST00000395740 PEAK1Q9H792 1746 aa6.1□□□□□ -1.43
FGD4-201ENST00000395740 CTIFO43310 598 aaKnown RBP6.1□□□□□ -1.43
FGD4-201ENST00000395740 CAVIN2O95810 425 aa6.1□□□□□ -1.43
FGD4-201ENST00000395740 PTMAP06454 111 aaKnown RBP6.1□□□□□ -1.43
FGD4-201ENST00000395740 KIF3AQ9Y496 699 aa6.1□□□□□ -1.43
FGD4-201ENST00000395740 WAPLQ7Z5K2 1190 aa6.1□□□□□ -1.43
FGD4-201ENST00000395740 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.1□□□□□ -1.43
FGD4-201ENST00000395740 ANKRD7Q92527 254 aa6.1□□□□□ -1.43
FGD4-201ENST00000395740 ALDH8A1Q9H2A2 487 aaPredicted RBP6.1□□□□□ -1.43
FGD4-201ENST00000395740 CCDC61Q9Y6R9 512 aa6.1□□□□□ -1.43
FGD4-201ENST00000395740 ELP1O95163 1332 aa6.1□□□□□ -1.43
FGD4-201ENST00000395740 LRP5O75197 1615 aa6.09□□□□□ -1.43
FGD4-201ENST00000395740 ZSCAN22P10073 491 aaPredicted RBP6.09□□□□□ -1.43
FGD4-201ENST00000395740 USP48Q86UV5 1035 aa6.09□□□□□ -1.43
FGD4-201ENST00000395740 CREBRFQ8IUR6 639 aa6.09□□□□□ -1.43
FGD4-201ENST00000395740 KIAA1524Q8TCG1 905 aa6.09□□□□□ -1.43
FGD4-201ENST00000395740 TTC14Q96N46 770 aa6.09□□□□□ -1.43
FGD4-201ENST00000395740 SH2B1Q9NRF2 756 aaPredicted RBP6.09□□□□□ -1.43
FGD4-201ENST00000395740 NSFL1CQ9UNZ2 370 aaKnown RBP6.09□□□□□ -1.43
FGD4-201ENST00000395740 PTPRUQ92729 1446 aa6.09□□□□□ -1.43
FGD4-201ENST00000395740 HMOX1P09601 288 aa6.09□□□□□ -1.44
FGD4-201ENST00000395740 CHAF1AQ13111 956 aaPredicted RBP6.09□□□□□ -1.44
FGD4-201ENST00000395740 SP7Q8TDD2 431 aaPredicted RBP6.09□□□□□ -1.44
FGD4-201ENST00000395740 MEIS3Q99687 375 aa6.09□□□□□ -1.44
FGD4-201ENST00000395740 RAD50Q92878 1312 aa6.09□□□□□ -1.44
FGD4-201ENST00000395740 MAP3K5Q99683 1374 aa6.09□□□□□ -1.44
FGD4-201ENST00000395740 PLEKHG3A1L390 1219 aa6.08□□□□□ -1.44
FGD4-201ENST00000395740 ZSCAN20P17040 1043 aaPredicted RBP6.08□□□□□ -1.44
FGD4-201ENST00000395740 HDGFP51858 240 aaKnown RBP6.08□□□□□ -1.44
FGD4-201ENST00000395740 SSH3Q8TE77 659 aa6.08□□□□□ -1.44
FGD4-201ENST00000395740 LIMCH1Q9UPQ0 1083 aa6.08□□□□□ -1.44
FGD4-201ENST00000395740 EMILIN1Q9Y6C2 1016 aa6.08□□□□□ -1.44
FGD4-201ENST00000395740 CEP170BQ9Y4F5 1589 aaPredicted RBP6.08□□□□□ -1.44
FGD4-201ENST00000395740 MYH15Q9Y2K3 1946 aa6.08□□□□□ -1.44
FGD4-201ENST00000395740 ADCY5O95622 1261 aa6.08□□□□□ -1.44
FGD4-201ENST00000395740 HSP90AB4PQ58FF6 505 aa6.08□□□□□ -1.44
FGD4-201ENST00000395740 TTC41PQ6P2S7 1318 aa6.08□□□□□ -1.44
FGD4-201ENST00000395740 TTC21AQ8NDW8 1320 aa6.08□□□□□ -1.44
FGD4-201ENST00000395740 OTUD7AQ8TE49 926 aaPredicted RBP6.08□□□□□ -1.44
FGD4-201ENST00000395740 THUMPD2Q9BTF0 503 aaKnown RBP6.08□□□□□ -1.44
FGD4-201ENST00000395740 SGSM2O43147 1006 aa6.07□□□□□ -1.44
FGD4-201ENST00000395740 F13A1P00488 732 aa6.07□□□□□ -1.44
FGD4-201ENST00000395740 LTKP29376 864 aa6.07□□□□□ -1.44
FGD4-201ENST00000395740 CDC25BP30305 580 aa6.07□□□□□ -1.44
FGD4-201ENST00000395740 DHX8Q14562 1220 aaKnown RBP6.07□□□□□ -1.44
FGD4-201ENST00000395740 CCDC30Q5VVM6 783 aa6.07□□□□□ -1.44
FGD4-201ENST00000395740 RBM43Q6ZSC3 357 aaKnown RBP6.07□□□□□ -1.44
FGD4-201ENST00000395740 RTF1Q92541 710 aaKnown RBP6.07□□□□□ -1.44
FGD4-201ENST00000395740 SNRKQ9NRH2 765 aa6.07□□□□□ -1.44
FGD4-201ENST00000395740 KCND1Q9NSA2 647 aa6.07□□□□□ -1.44
FGD4-201ENST00000395740 HDAC5Q9UQL6 1122 aa6.07□□□□□ -1.44
FGD4-201ENST00000395740 KDM3BQ7LBC6 1761 aa6.07□□□□□ -1.44
FGD4-201ENST00000395740 STX6O43752 255 aa6.07□□□□□ -1.44
FGD4-201ENST00000395740 NEMFO60524 1076 aa6.07□□□□□ -1.44
FGD4-201ENST00000395740 CCDC192P0DO97 292 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms