RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 WWC3Q9ULE0 1092 aa11.7□□□□□ -0.54
PTPN20-205ENST00000395721 ZBTB1Q9Y2K1 713 aa11.7□□□□□ -0.54
PTPN20-205ENST00000395721 COL15A1P39059 1388 aa11.69□□□□□ -0.54
PTPN20-205ENST00000395721 ZNF790Q6PG37 636 aa11.69□□□□□ -0.54
PTPN20-205ENST00000395721 FMNL2Q96PY5 1086 aa11.69□□□□□ -0.54
PTPN20-205ENST00000395721 TEX13AQ9BXU3 409 aaPredicted RBP11.69□□□□□ -0.54
PTPN20-205ENST00000395721 UBR2Q8IWV8 1755 aa11.69□□□□□ -0.54
PTPN20-205ENST00000395721 CEMIPQ8WUJ3 1361 aa11.69□□□□□ -0.54
PTPN20-205ENST00000395721 HEG1Q9ULI3 1381 aa11.69□□□□□ -0.54
PTPN20-205ENST00000395721 CANXP27824 592 aaKnown RBP11.69□□□□□ -0.54
PTPN20-205ENST00000395721 BTBD11A6QL63 1104 aa11.68□□□□□ -0.54
PTPN20-205ENST00000395721 TGFB2P61812 414 aa11.68□□□□□ -0.54
PTPN20-205ENST00000395721 FKBP8Q14318 412 aa11.68□□□□□ -0.54
PTPN20-205ENST00000395721 ZNF496Q96IT1 587 aaPredicted RBP11.68□□□□□ -0.54
PTPN20-205ENST00000395721 PXDNLA1KZ92 1463 aa11.68□□□□□ -0.54
PTPN20-205ENST00000395721 A0A087WZG4 1122 aa11.68□□□□□ -0.54
PTPN20-205ENST00000395721 USPL1Q5W0Q7 1092 aa11.68□□□□□ -0.54
PTPN20-205ENST00000395721 SIPA1L3O60292 1781 aaPredicted RBP11.68□□□□□ -0.54
PTPN20-205ENST00000395721 NPM2Q86SE8 214 aaKnown RBP11.67□□□□□ -0.54
PTPN20-205ENST00000395721 NARFQ9UHQ1 456 aa11.67□□□□□ -0.54
PTPN20-205ENST00000395721 HTATSF1O43719 755 aaKnown RBP11.67□□□□□ -0.54
PTPN20-205ENST00000395721 RALBP1Q15311 655 aa11.67□□□□□ -0.54
PTPN20-205ENST00000395721 PNNQ9H307 717 aaKnown RBP11.67□□□□□ -0.54
PTPN20-205ENST00000395721 DDR1Q08345 913 aa11.67□□□□□ -0.54
PTPN20-205ENST00000395721 MCM10Q7L590 875 aa11.67□□□□□ -0.54
PTPN20-205ENST00000395721 MAPK8IP3Q9UPT6 1336 aa11.66□□□□□ -0.54
PTPN20-205ENST00000395721 KIF13BQ9NQT8 1826 aa11.66□□□□□ -0.54
PTPN20-205ENST00000395721 DDX10Q13206 875 aaKnown RBP11.66□□□□□ -0.54
PTPN20-205ENST00000395721 ZNF330Q9Y3S2 320 aaPredicted RBP11.66□□□□□ -0.54
PTPN20-205ENST00000395721 A0A0G2JLW4 131 aa11.65□□□□□ -0.54
PTPN20-205ENST00000395721 DPEP1P16444 411 aa11.65□□□□□ -0.54
PTPN20-205ENST00000395721 BCS1LQ9Y276 419 aa11.65□□□□□ -0.54
PTPN20-205ENST00000395721 POLRMTO00411 1230 aaKnown RBP11.64□□□□□ -0.55
PTPN20-205ENST00000395721 KCNQ3O43525 872 aa11.64□□□□□ -0.55
PTPN20-205ENST00000395721 DCTN1Q14203 1278 aa11.64□□□□□ -0.55
PTPN20-205ENST00000395721 TM4SF1P30408 202 aa11.64□□□□□ -0.55
PTPN20-205ENST00000395721 EIF5P55010 431 aaKnown RBP11.64□□□□□ -0.55
PTPN20-205ENST00000395721 KIAA1551Q9HCM1 1747 aa11.63□□□□□ -0.55
PTPN20-205ENST00000395721 N4BP2Q86UW6 1770 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-205ENST00000395721 NFIXQ14938 502 aa11.63□□□□□ -0.55
PTPN20-205ENST00000395721 NFE2L2Q16236 605 aa11.63□□□□□ -0.55
PTPN20-205ENST00000395721 ATP10DQ9P241 1426 aa11.63□□□□□ -0.55
PTPN20-205ENST00000395721 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
PTPN20-205ENST00000395721 IL6STP40189 918 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-205ENST00000395721 TAF7Q15545 349 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-205ENST00000395721 A1BGP04217 495 aa11.62□□□□□ -0.55
PTPN20-205ENST00000395721 PNISRQ8TF01 805 aaKnown RBP11.62□□□□□ -0.55
PTPN20-205ENST00000395721 MYBBP1AQ9BQG0 1328 aaKnown RBP11.62□□□□□ -0.55
PTPN20-205ENST00000395721 GIGYF1O75420 1035 aaPredicted RBP11.62□□□□□ -0.55
PTPN20-205ENST00000395721 BICDL1Q6ZP65 573 aa11.62□□□□□ -0.55
PTPN20-205ENST00000395721 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
PTPN20-205ENST00000395721 PIM2Q9P1W9 311 aa11.62□□□□□ -0.55
PTPN20-205ENST00000395721 SERPINB2P05120 415 aa11.62□□□□□ -0.55
PTPN20-205ENST00000395721 ARHGAP27Q6ZUM4 889 aa11.61□□□□□ -0.55
PTPN20-205ENST00000395721 TBC1D2BQ9UPU7 963 aa11.61□□□□□ -0.55
PTPN20-205ENST00000395721 SCN7AQ01118 1682 aa11.61□□□□□ -0.55
PTPN20-205ENST00000395721 DALRD3Q5D0E6 543 aaKnown RBP11.61□□□□□ -0.55
PTPN20-205ENST00000395721 PLEKHF1Q96S99 279 aa11.61□□□□□ -0.55
PTPN20-205ENST00000395721 CHRNA5P30532 468 aa11.6□□□□□ -0.55
PTPN20-205ENST00000395721 DEKP35659 375 aaKnown RBP11.6□□□□□ -0.55
PTPN20-205ENST00000395721 DZIP3Q86Y13 1208 aaKnown RBP11.6□□□□□ -0.55
PTPN20-205ENST00000395721 USP16Q9Y5T5 823 aa11.6□□□□□ -0.55
PTPN20-205ENST00000395721 ADCY9O60503 1353 aa11.59□□□□□ -0.55
PTPN20-205ENST00000395721 NPHP1O15259 732 aa11.59□□□□□ -0.55
PTPN20-205ENST00000395721 WDR43Q15061 677 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTPN20-205ENST00000395721 CARMIL3Q8ND23 1372 aa11.59□□□□□ -0.55
PTPN20-205ENST00000395721 DLG5Q8TDM6 1919 aa11.59□□□□□ -0.55
PTPN20-205ENST00000395721 LMOD3Q0VAK6 560 aa11.59□□□□□ -0.55
PTPN20-205ENST00000395721 TBC1D9BQ66K14 1250 aa11.59□□□□□ -0.55
PTPN20-205ENST00000395721 GPBP1L1Q9HC44 474 aaPredicted RBP11.59□□□□□ -0.55
PTPN20-205ENST00000395721 MIS18AQ9NYP9 233 aa11.59□□□□□ -0.55
PTPN20-205ENST00000395721 AFDNP55196 1824 aaKnown RBP11.58□□□□□ -0.55
PTPN20-205ENST00000395721 PRAMEF22A3QJZ6 481 aa11.58□□□□□ -0.56
PTPN20-205ENST00000395721 CAMTA2O94983 1202 aa11.58□□□□□ -0.56
PTPN20-205ENST00000395721 KCNA3P22001 575 aa11.58□□□□□ -0.56
PTPN20-205ENST00000395721 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
PTPN20-205ENST00000395721 C2CD5Q86YS7 1000 aa11.58□□□□□ -0.56
PTPN20-205ENST00000395721 ZNF526Q8TF50 670 aaPredicted RBP11.58□□□□□ -0.56
PTPN20-205ENST00000395721 THUMPD2Q9BTF0 503 aaKnown RBP11.58□□□□□ -0.56
PTPN20-205ENST00000395721 ZNF652Q9Y2D9 606 aa11.58□□□□□ -0.56
PTPN20-205ENST00000395721 NRXN2Q9P2S2 1712 aa11.58□□□□□ -0.56
PTPN20-205ENST00000395721 C1QTNF8P60827 252 aa11.58□□□□□ -0.56
PTPN20-205ENST00000395721 SALL2Q9Y467 1007 aaPredicted RBP11.58□□□□□ -0.56
PTPN20-205ENST00000395721 BRCA1P38398 1863 aaKnown RBP11.58□□□□□ -0.56
PTPN20-205ENST00000395721 SETDB2Q96T68 719 aa11.57□□□□□ -0.56
PTPN20-205ENST00000395721 ARFGEF1Q9Y6D6 1849 aa11.57□□□□□ -0.56
PTPN20-205ENST00000395721 H0YIN7 160 aa11.56□□□□□ -0.56
PTPN20-205ENST00000395721 RIPK4P57078 832 aa11.56□□□□□ -0.56
PTPN20-205ENST00000395721 CCDC136Q96JN2 1154 aa11.56□□□□□ -0.56
PTPN20-205ENST00000395721 PDZRN3Q9UPQ7 1066 aa11.56□□□□□ -0.56
PTPN20-205ENST00000395721 LAMB4A4D0S4 1761 aa11.56□□□□□ -0.56
PTPN20-205ENST00000395721 BCORQ6W2J9 1755 aa11.56□□□□□ -0.56
PTPN20-205ENST00000395721 KDM3BQ7LBC6 1761 aa11.56□□□□□ -0.56
PTPN20-205ENST00000395721 ST5P78524 1137 aa11.56□□□□□ -0.56
PTPN20-205ENST00000395721 CNBD1Q8NA66 436 aa11.56□□□□□ -0.56
PTPN20-205ENST00000395721 TSPYL4Q9UJ04 414 aa11.56□□□□□ -0.56
PTPN20-205ENST00000395721 PDE6BP35913 854 aa11.55□□□□□ -0.56
PTPN20-205ENST00000395721 TMPOP42166 694 aaKnown RBP11.55□□□□□ -0.56
PTPN20-205ENST00000395721 EIF4A1P60842 406 aaKnown RBP11.55□□□□□ -0.56
PTPN20-205ENST00000395721 PRR5LQ6MZQ0 368 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms