RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 AMOTQ4VCS5 1084 aa11.26□□□□□ -0.61
CDRT1-203ENST00000395667 NOL8Q76FK4 1167 aaKnown RBP11.26□□□□□ -0.61
CDRT1-203ENST00000395667 GAS2L3Q86XJ1 694 aa11.26□□□□□ -0.61
CDRT1-203ENST00000395667 RHPN1Q8TCX5 695 aa11.26□□□□□ -0.61
CDRT1-203ENST00000395667 AOX1Q06278 1338 aa11.26□□□□□ -0.61
CDRT1-203ENST00000395667 MAP4K4O95819 1239 aaPredicted RBP11.26□□□□□ -0.61
CDRT1-203ENST00000395667 MCM2P49736 904 aa11.26□□□□□ -0.61
CDRT1-203ENST00000395667 BEND3Q5T5X7 828 aa11.26□□□□□ -0.61
CDRT1-203ENST00000395667 KIF1BPQ96EK5 621 aa11.26□□□□□ -0.61
CDRT1-203ENST00000395667 PALD1Q9ULE6 856 aa11.26□□□□□ -0.61
CDRT1-203ENST00000395667 CYP2E1P05181 493 aaPredicted RBP11.25□□□□□ -0.61
CDRT1-203ENST00000395667 POLA2Q14181 598 aa11.25□□□□□ -0.61
CDRT1-203ENST00000395667 TMX3Q96JJ7 454 aa11.25□□□□□ -0.61
CDRT1-203ENST00000395667 ANKRD24Q8TF21 1146 aa11.25□□□□□ -0.61
CDRT1-203ENST00000395667 DBF4Q9UBU7 674 aaPredicted RBP11.25□□□□□ -0.61
CDRT1-203ENST00000395667 RNMTO43148 476 aaKnown RBP11.25□□□□□ -0.61
CDRT1-203ENST00000395667 ANAPC15P60006 121 aa11.25□□□□□ -0.61
CDRT1-203ENST00000395667 FOXD4L5Q5VV16 416 aaPredicted RBP11.25□□□□□ -0.61
CDRT1-203ENST00000395667 ARHGEF25Q86VW2 580 aa11.25□□□□□ -0.61
CDRT1-203ENST00000395667 FOXD4L4Q8WXT5 416 aaPredicted RBP11.25□□□□□ -0.61
CDRT1-203ENST00000395667 RRAGDQ9NQL2 400 aaPredicted RBP11.25□□□□□ -0.61
CDRT1-203ENST00000395667 RGPD2P0DJD1 1756 aa11.24□□□□□ -0.61
CDRT1-203ENST00000395667 N4BP2Q86UW6 1770 aaPredicted RBP11.24□□□□□ -0.61
CDRT1-203ENST00000395667 HSP90AB4PQ58FF6 505 aa11.24□□□□□ -0.61
CDRT1-203ENST00000395667 C9orf78Q9NZ63 289 aaPredicted RBP11.24□□□□□ -0.61
CDRT1-203ENST00000395667 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.24□□□□□ -0.61
CDRT1-203ENST00000395667 UPF3BQ9BZI7 483 aaKnown RBP11.23□□□□□ -0.61
CDRT1-203ENST00000395667 MED1Q15648 1581 aaPredicted RBP11.23□□□□□ -0.61
CDRT1-203ENST00000395667 PRPF40AO75400 957 aaKnown RBP11.23□□□□□ -0.61
CDRT1-203ENST00000395667 CAVIN1Q6NZI2 390 aaKnown RBP11.23□□□□□ -0.61
CDRT1-203ENST00000395667 MAP3K2Q9Y2U5 619 aa11.23□□□□□ -0.61
CDRT1-203ENST00000395667 ADCY9O60503 1353 aa11.22□□□□□ -0.61
CDRT1-203ENST00000395667 CNTROBQ8N137 903 aa11.22□□□□□ -0.61
CDRT1-203ENST00000395667 ANO8Q9HCE9 1232 aaPredicted RBP11.22□□□□□ -0.61
CDRT1-203ENST00000395667 LMBRD1Q9NUN5 540 aa11.22□□□□□ -0.61
CDRT1-203ENST00000395667 TUBGCP6Q96RT7 1819 aa11.22□□□□□ -0.61
CDRT1-203ENST00000395667 KDM3BQ7LBC6 1761 aa11.22□□□□□ -0.61
CDRT1-203ENST00000395667 PI4K2BQ8TCG2 481 aa11.22□□□□□ -0.61
CDRT1-203ENST00000395667 TRIM44Q96DX7 344 aaPredicted RBP11.22□□□□□ -0.61
CDRT1-203ENST00000395667 ZDHHC9Q9Y397 364 aa11.22□□□□□ -0.61
CDRT1-203ENST00000395667 GIGYF1O75420 1035 aaPredicted RBP11.22□□□□□ -0.61
CDRT1-203ENST00000395667 KRT28Q7Z3Y7 464 aa11.22□□□□□ -0.61
CDRT1-203ENST00000395667 PXDNQ92626 1479 aa11.21□□□□□ -0.61
CDRT1-203ENST00000395667 NPHP4O75161 1426 aaPredicted RBP11.21□□□□□ -0.61
CDRT1-203ENST00000395667 PROSER3Q2NL68 480 aa11.21□□□□□ -0.61
CDRT1-203ENST00000395667 KIAA1211Q6ZU35 1233 aa11.21□□□□□ -0.61
CDRT1-203ENST00000395667 CLASRPQ8N2M8 674 aaKnown RBP11.21□□□□□ -0.61
CDRT1-203ENST00000395667 ANP32BQ92688 251 aaKnown RBP11.21□□□□□ -0.61
CDRT1-203ENST00000395667 IL25Q9H293 177 aa11.21□□□□□ -0.61
CDRT1-203ENST00000395667 LMO7Q8WWI1 1683 aa11.21□□□□□ -0.61
CDRT1-203ENST00000395667 NCAPD2Q15021 1401 aa11.21□□□□□ -0.62
CDRT1-203ENST00000395667 KSR2Q6VAB6 950 aa11.21□□□□□ -0.62
CDRT1-203ENST00000395667 PROSER2Q86WR7 435 aaPredicted RBP11.21□□□□□ -0.62
CDRT1-203ENST00000395667 PRAMEF22A3QJZ6 481 aa11.2□□□□□ -0.62
CDRT1-203ENST00000395667 ALDH1L1O75891 902 aa11.2□□□□□ -0.62
CDRT1-203ENST00000395667 NASPP49321 788 aaPredicted RBP11.2□□□□□ -0.62
CDRT1-203ENST00000395667 HDAC5Q9UQL6 1122 aa11.2□□□□□ -0.62
CDRT1-203ENST00000395667 AXIN2Q9Y2T1 843 aa11.2□□□□□ -0.62
CDRT1-203ENST00000395667 SGSM2O43147 1006 aa11.2□□□□□ -0.62
CDRT1-203ENST00000395667 HSPA4P34932 840 aa11.2□□□□□ -0.62
CDRT1-203ENST00000395667 ZC3H6P61129 1189 aaKnown RBP11.2□□□□□ -0.62
CDRT1-203ENST00000395667 AIMP1Q12904 312 aaKnown RBP11.2□□□□□ -0.62
CDRT1-203ENST00000395667 CUL4AQ13619 759 aa11.2□□□□□ -0.62
CDRT1-203ENST00000395667 CWF19L2Q2TBE0 894 aaKnown RBP11.2□□□□□ -0.62
CDRT1-203ENST00000395667 CHAMP1Q96JM3 812 aa11.2□□□□□ -0.62
CDRT1-203ENST00000395667 EPB41L2O43491 1005 aaKnown RBP11.19□□□□□ -0.62
CDRT1-203ENST00000395667 GLRX3O76003 335 aaKnown RBP11.19□□□□□ -0.62
CDRT1-203ENST00000395667 CWC27Q6UX04 472 aaKnown RBP11.19□□□□□ -0.62
CDRT1-203ENST00000395667 HYPKQ9NX55 129 aa11.19□□□□□ -0.62
CDRT1-203ENST00000395667 ZNF142P52746 1687 aaPredicted RBP11.19□□□□□ -0.62
CDRT1-203ENST00000395667 DDX58O95786 925 aaKnown RBP11.19□□□□□ -0.62
CDRT1-203ENST00000395667 IFIT2P09913 472 aaKnown RBP11.19□□□□□ -0.62
CDRT1-203ENST00000395667 ZSCAN23Q3MJ62 389 aa11.19□□□□□ -0.62
CDRT1-203ENST00000395667 INTS4Q96HW7 963 aaKnown RBP11.19□□□□□ -0.62
CDRT1-203ENST00000395667 GPATCH3Q96I76 525 aa11.19□□□□□ -0.62
CDRT1-203ENST00000395667 DIAPH3Q9NSV4 1193 aa11.19□□□□□ -0.62
CDRT1-203ENST00000395667 PHRF1Q9P1Y6 1649 aaKnown RBP11.19□□□□□ -0.62
CDRT1-203ENST00000395667 RAPGEF4Q8WZA2 1011 aa11.19□□□□□ -0.62
CDRT1-203ENST00000395667 PA2G4Q9UQ80 394 aaKnown RBP11.19□□□□□ -0.62
CDRT1-203ENST00000395667 TTC41PQ6P2S7 1318 aa11.19□□□□□ -0.62
CDRT1-203ENST00000395667 RAD50Q92878 1312 aa11.19□□□□□ -0.62
CDRT1-203ENST00000395667 MTX1Q13505 466 aa11.18□□□□□ -0.62
CDRT1-203ENST00000395667 ERC1Q8IUD2 1116 aa11.18□□□□□ -0.62
CDRT1-203ENST00000395667 NLRP2Q9NX02 1062 aa11.18□□□□□ -0.62
CDRT1-203ENST00000395667 ZNF445P59923 1031 aa11.18□□□□□ -0.62
CDRT1-203ENST00000395667 SPG7Q9UQ90 795 aa11.18□□□□□ -0.62
CDRT1-203ENST00000395667 SLIT3O75094 1523 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 OVOS2A0A0G2JMS6 1433 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 BRD1O95696 1058 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 LINS1Q8NG48 757 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 GPT2Q8TD30 523 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 ECHDC1Q9NTX5 307 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
CDRT1-203ENST00000395667 GRM8O00222 908 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 SLC39A6Q13433 755 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 RIC3Q7Z5B4 369 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 RUFY2Q8WXA3 655 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 IL17RAQ96F46 866 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 DDX21Q9NR30 783 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDRT1-203ENST00000395667 ERBB3P21860 1342 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms