RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 JCADQ9P266 1359 aa9.26□□□□□ -0.93
AP3S1-202ENST00000395548 ADD1P35611 737 aaKnown RBP9.26□□□□□ -0.93
AP3S1-202ENST00000395548 EFCAB2Q5VUJ9 269 aa9.26□□□□□ -0.93
AP3S1-202ENST00000395548 CYLDQ9NQC7 956 aa9.26□□□□□ -0.93
AP3S1-202ENST00000395548 FIGNL2A6NMB9 653 aa9.25□□□□□ -0.93
AP3S1-202ENST00000395548 PTGIRP43119 386 aa9.25□□□□□ -0.93
AP3S1-202ENST00000395548 ZNF395Q9H8N7 513 aaPredicted RBP9.25□□□□□ -0.93
AP3S1-202ENST00000395548 POLMQ9NP87 494 aaPredicted RBP9.25□□□□□ -0.93
AP3S1-202ENST00000395548 TBC1D2BQ9UPU7 963 aa9.25□□□□□ -0.93
AP3S1-202ENST00000395548 SYNMO15061 1565 aa9.24□□□□□ -0.93
AP3S1-202ENST00000395548 A2ML1A8K2U0 1454 aa9.24□□□□□ -0.93
AP3S1-202ENST00000395548 LCE2CQ5TA81 110 aa9.24□□□□□ -0.93
AP3S1-202ENST00000395548 INSM2Q96T92 566 aaPredicted RBP9.24□□□□□ -0.93
AP3S1-202ENST00000395548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.24□□□□□ -0.93
AP3S1-202ENST00000395548 ATAD2Q6PL18 1390 aa9.24□□□□□ -0.93
AP3S1-202ENST00000395548 PPFIA3O75145 1194 aa9.23□□□□□ -0.93
AP3S1-202ENST00000395548 CTSOP43234 321 aaPredicted RBP9.23□□□□□ -0.93
AP3S1-202ENST00000395548 EIF4G2P78344 907 aaKnown RBP eCLIP9.23□□□□□ -0.93
AP3S1-202ENST00000395548 CC2D2BQ6DHV5 1058 aa9.23□□□□□ -0.93
AP3S1-202ENST00000395548 TIMELESSQ9UNS1 1208 aa9.23□□□□□ -0.93
AP3S1-202ENST00000395548 SPATA31A6Q5VVP1 1343 aa9.23□□□□□ -0.93
AP3S1-202ENST00000395548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.23□□□□□ -0.93
AP3S1-202ENST00000395548 PLCH2O75038 1416 aa9.22□□□□□ -0.93
AP3S1-202ENST00000395548 POLR1AO95602 1720 aaPredicted RBP9.22□□□□□ -0.93
AP3S1-202ENST00000395548 CDK13Q14004 1512 aaKnown RBP9.22□□□□□ -0.93
AP3S1-202ENST00000395548 NEURL4Q96JN8 1562 aa9.22□□□□□ -0.93
AP3S1-202ENST00000395548 DIP2CQ9Y2E4 1556 aa9.22□□□□□ -0.93
AP3S1-202ENST00000395548 GMPRP36959 345 aa9.22□□□□□ -0.93
AP3S1-202ENST00000395548 ERVK-9P63128 1117 aa9.22□□□□□ -0.93
AP3S1-202ENST00000395548 PTSQ03393 145 aa9.22□□□□□ -0.93
AP3S1-202ENST00000395548 AFAP1Q8N556 730 aa9.22□□□□□ -0.93
AP3S1-202ENST00000395548 NPHP4O75161 1426 aaPredicted RBP9.22□□□□□ -0.93
AP3S1-202ENST00000395548 SENP3-EIF4A1A0A087X0R7 540 aa9.21□□□□□ -0.94
AP3S1-202ENST00000395548 ATP5J2-PTCD1G3V325 749 aa9.21□□□□□ -0.94
AP3S1-202ENST00000395548 THEMISQ8N1K5 641 aaPredicted RBP9.21□□□□□ -0.94
AP3S1-202ENST00000395548 CEP126Q9P2H0 1117 aa9.21□□□□□ -0.94
AP3S1-202ENST00000395548 PCDHB11Q9Y5F2 797 aa9.21□□□□□ -0.94
AP3S1-202ENST00000395548 VSIG8P0DPA2 414 aa9.2□□□□□ -0.94
AP3S1-202ENST00000395548 KDF1Q8NAX2 398 aaPredicted RBP9.2□□□□□ -0.94
AP3S1-202ENST00000395548 GDPD2Q9HCC8 539 aa9.2□□□□□ -0.94
AP3S1-202ENST00000395548 ERBB4Q15303 1308 aa9.2□□□□□ -0.94
AP3S1-202ENST00000395548 MED14O60244 1454 aa9.2□□□□□ -0.94
AP3S1-202ENST00000395548 KDM5CP41229 1560 aa9.2□□□□□ -0.94
AP3S1-202ENST00000395548 DNMT1P26358 1616 aaKnown RBP9.2□□□□□ -0.94
AP3S1-202ENST00000395548 IRF5Q13568 498 aa9.19□□□□□ -0.94
AP3S1-202ENST00000395548 WASHC4Q2M389 1173 aa9.19□□□□□ -0.94
AP3S1-202ENST00000395548 RNF217Q8TC41 542 aa9.19□□□□□ -0.94
AP3S1-202ENST00000395548 MLH3Q9UHC1 1453 aa9.19□□□□□ -0.94
AP3S1-202ENST00000395548 LRP5O75197 1615 aa9.19□□□□□ -0.94
AP3S1-202ENST00000395548 ABL2P42684 1182 aa9.18□□□□□ -0.94
AP3S1-202ENST00000395548 RBM6P78332 1123 aaKnown RBP9.18□□□□□ -0.94
AP3S1-202ENST00000395548 MCM6Q14566 821 aa9.18□□□□□ -0.94
AP3S1-202ENST00000395548 CYP2U1Q7Z449 544 aa9.18□□□□□ -0.94
AP3S1-202ENST00000395548 RNF144AP50876 292 aaPredicted RBP9.17□□□□□ -0.94
AP3S1-202ENST00000395548 CCDC155Q8N6L0 562 aa9.17□□□□□ -0.94
AP3S1-202ENST00000395548 STK17AQ9UEE5 414 aa9.17□□□□□ -0.94
AP3S1-202ENST00000395548 RAPGEF6Q8TEU7 1601 aa9.16□□□□□ -0.94
AP3S1-202ENST00000395548 SLC35F4A4IF30 521 aa9.16□□□□□ -0.94
AP3S1-202ENST00000395548 MYCP01106 439 aaPredicted RBP9.16□□□□□ -0.94
AP3S1-202ENST00000395548 GPC1P35052 558 aa9.16□□□□□ -0.94
AP3S1-202ENST00000395548 FOXD4L5Q5VV16 416 aaPredicted RBP9.16□□□□□ -0.94
AP3S1-202ENST00000395548 ERICH6Q7L0X2 663 aa9.16□□□□□ -0.94
AP3S1-202ENST00000395548 LYSMD3Q7Z3D4 306 aa9.16□□□□□ -0.94
AP3S1-202ENST00000395548 NLRP3Q96P20 1036 aa9.16□□□□□ -0.94
AP3S1-202ENST00000395548 KDM5DQ9BY66 1539 aa9.15□□□□□ -0.94
AP3S1-202ENST00000395548 LRRC9Q6ZRR7 1453 aa9.15□□□□□ -0.94
AP3S1-202ENST00000395548 RGS12O14924 1447 aa9.15□□□□□ -0.94
AP3S1-202ENST00000395548 FGD6Q6ZV73 1430 aa9.15□□□□□ -0.94
AP3S1-202ENST00000395548 A0A1W2PRU2 124 aa9.15□□□□□ -0.94
AP3S1-202ENST00000395548 MEN1O00255 615 aa9.15□□□□□ -0.94
AP3S1-202ENST00000395548 SCTRP47872 440 aa9.15□□□□□ -0.94
AP3S1-202ENST00000395548 VAC14Q08AM6 782 aa9.15□□□□□ -0.94
AP3S1-202ENST00000395548 SLFNL1Q499Z3 407 aa9.15□□□□□ -0.94
AP3S1-202ENST00000395548 NGLY1Q96IV0 654 aa9.15□□□□□ -0.94
AP3S1-202ENST00000395548 DEPDC5O75140 1603 aa9.15□□□□□ -0.94
AP3S1-202ENST00000395548 ABCA6Q8N139 1617 aa9.15□□□□□ -0.94
AP3S1-202ENST00000395548 CTTNBP2Q8WZ74 1663 aa9.14□□□□□ -0.95
AP3S1-202ENST00000395548 TRAK2O60296 914 aa9.14□□□□□ -0.95
AP3S1-202ENST00000395548 WWC1Q8IX03 1113 aa9.14□□□□□ -0.95
AP3S1-202ENST00000395548 NANOS1Q8WY41 292 aaKnown RBP9.14□□□□□ -0.95
AP3S1-202ENST00000395548 OSBPL3Q9H4L5 887 aa9.14□□□□□ -0.95
AP3S1-202ENST00000395548 NUP153P49790 1475 aaKnown RBP9.14□□□□□ -0.95
AP3S1-202ENST00000395548 ROBO1Q9Y6N7 1651 aa9.13□□□□□ -0.95
AP3S1-202ENST00000395548 FAM181BA6NEQ2 426 aa9.13□□□□□ -0.95
AP3S1-202ENST00000395548 SOX11P35716 441 aa9.13□□□□□ -0.95
AP3S1-202ENST00000395548 RNF135Q8IUD6 432 aa9.13□□□□□ -0.95
AP3S1-202ENST00000395548 CCDC85AQ96PX6 553 aaPredicted RBP9.13□□□□□ -0.95
AP3S1-202ENST00000395548 QTRT2Q9H974 415 aaKnown RBP9.13□□□□□ -0.95
AP3S1-202ENST00000395548 LRP6O75581 1613 aa9.13□□□□□ -0.95
AP3S1-202ENST00000395548 AFF2P51816 1311 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 FAM135AQ9P2D6 1515 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 GNRH1P01148 92 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 FLIIQ13045 1269 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 USP4Q13107 963 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 SEMA3FQ13275 785 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 CLN3Q13286 438 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 PRICKLE2Q7Z3G6 844 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 PHTF2Q8N3S3 785 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 ZSCAN1Q8NBB4 408 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 DOLKQ9UPQ8 538 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms