RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 ZNF496Q96IT1 587 aaPredicted RBP15.54■□□□□ 0.08
HLA-DQA1-203ENST00000395363 CCDC87Q9NVE4 849 aa15.54■□□□□ 0.08
HLA-DQA1-203ENST00000395363 ARFGEF1Q9Y6D6 1849 aa15.54■□□□□ 0.08
HLA-DQA1-203ENST00000395363 CEMIPQ8WUJ3 1361 aa15.53■□□□□ 0.08
HLA-DQA1-203ENST00000395363 CCDC88AQ3V6T2 1871 aa15.53■□□□□ 0.08
HLA-DQA1-203ENST00000395363 SOS1Q07889 1333 aaPredicted RBP15.53■□□□□ 0.08
HLA-DQA1-203ENST00000395363 USP42Q9H9J4 1324 aaKnown RBP15.53■□□□□ 0.08
HLA-DQA1-203ENST00000395363 PRAMEF22A3QJZ6 481 aa15.53■□□□□ 0.08
HLA-DQA1-203ENST00000395363 PIP4K2AP48426 406 aaPredicted RBP15.53■□□□□ 0.08
HLA-DQA1-203ENST00000395363 DDR1Q08345 913 aa15.53■□□□□ 0.08
HLA-DQA1-203ENST00000395363 ZNF784Q8NCA9 323 aaPredicted RBP15.53■□□□□ 0.08
HLA-DQA1-203ENST00000395363 CD2APQ9Y5K6 639 aa15.53■□□□□ 0.08
HLA-DQA1-203ENST00000395363 COL15A1P39059 1388 aa15.52■□□□□ 0.08
HLA-DQA1-203ENST00000395363 NRXN2Q9P2S2 1712 aa15.52■□□□□ 0.08
HLA-DQA1-203ENST00000395363 CANXP27824 592 aaKnown RBP15.52■□□□□ 0.08
HLA-DQA1-203ENST00000395363 USPL1Q5W0Q7 1092 aa15.52■□□□□ 0.08
HLA-DQA1-203ENST00000395363 NUDCQ9Y266 331 aa15.52■□□□□ 0.08
HLA-DQA1-203ENST00000395363 COL11A2P13942 1736 aaPredicted RBP15.51■□□□□ 0.07
HLA-DQA1-203ENST00000395363 ZNF790Q6PG37 636 aa15.51■□□□□ 0.07
HLA-DQA1-203ENST00000395363 TTC5Q8N0Z6 440 aa15.51■□□□□ 0.07
HLA-DQA1-203ENST00000395363 THUMPD2Q9BTF0 503 aaKnown RBP15.51■□□□□ 0.07
HLA-DQA1-203ENST00000395363 DLEC1Q9Y238 1755 aa15.51■□□□□ 0.07
HLA-DQA1-203ENST00000395363 HEG1Q9ULI3 1381 aa15.5■□□□□ 0.07
HLA-DQA1-203ENST00000395363 A0A0G2JLW4 131 aa15.5■□□□□ 0.07
HLA-DQA1-203ENST00000395363 ZNF330Q9Y3S2 320 aaPredicted RBP15.5■□□□□ 0.07
HLA-DQA1-203ENST00000395363 SBF1O95248 1867 aa15.49■□□□□ 0.07
HLA-DQA1-203ENST00000395363 BCL2L12Q9HB09 334 aa15.49■□□□□ 0.07
HLA-DQA1-203ENST00000395363 MIS18AQ9NYP9 233 aa15.49■□□□□ 0.07
HLA-DQA1-203ENST00000395363 FCHSD2O94868 740 aa15.48■□□□□ 0.07
HLA-DQA1-203ENST00000395363 HMGB2P26583 209 aaKnown RBP15.48■□□□□ 0.07
HLA-DQA1-203ENST00000395363 NLGN1Q8N2Q7 840 aa15.48■□□□□ 0.07
HLA-DQA1-203ENST00000395363 CARMIL3Q8ND23 1372 aa15.48■□□□□ 0.07
HLA-DQA1-203ENST00000395363 BTBD11A6QL63 1104 aa15.47■□□□□ 0.07
HLA-DQA1-203ENST00000395363 A1BGP04217 495 aa15.47■□□□□ 0.07
HLA-DQA1-203ENST00000395363 DPEP1P16444 411 aa15.47■□□□□ 0.07
HLA-DQA1-203ENST00000395363 PARP3Q9Y6F1 533 aa15.47■□□□□ 0.07
HLA-DQA1-203ENST00000395363 NUP98P52948 1817 aa15.46■□□□□ 0.07
HLA-DQA1-203ENST00000395363 POLRMTO00411 1230 aaKnown RBP15.46■□□□□ 0.07
HLA-DQA1-203ENST00000395363 CHRNA5P30532 468 aa15.46■□□□□ 0.07
HLA-DQA1-203ENST00000395363 BICDL1Q6ZP65 573 aa15.46■□□□□ 0.07
HLA-DQA1-203ENST00000395363 PLEKHF1Q96S99 279 aa15.46■□□□□ 0.07
HLA-DQA1-203ENST00000395363 ZPR1O75312 459 aa15.45■□□□□ 0.06
HLA-DQA1-203ENST00000395363 NFIXQ14938 502 aa15.45■□□□□ 0.06
HLA-DQA1-203ENST00000395363 VSIG10Q8N0Z9 540 aa15.45■□□□□ 0.06
HLA-DQA1-203ENST00000395363 CCDC24Q8N4L8 307 aa15.45■□□□□ 0.06
HLA-DQA1-203ENST00000395363 TBC1D2BQ9UPU7 963 aa15.45■□□□□ 0.06
HLA-DQA1-203ENST00000395363 USP16Q9Y5T5 823 aa15.45■□□□□ 0.06
HLA-DQA1-203ENST00000395363 CCDC146Q8IYE0 955 aa15.44■□□□□ 0.06
HLA-DQA1-203ENST00000395363 RTF1Q92541 710 aaKnown RBP15.44■□□□□ 0.06
HLA-DQA1-203ENST00000395363 FMNL2Q96PY5 1086 aa15.44■□□□□ 0.06
HLA-DQA1-203ENST00000395363 NARFQ9UHQ1 456 aa15.44■□□□□ 0.06
HLA-DQA1-203ENST00000395363 BCS1LQ9Y276 419 aa15.44■□□□□ 0.06
HLA-DQA1-203ENST00000395363 ATP10DQ9P241 1426 aa15.43■□□□□ 0.06
HLA-DQA1-203ENST00000395363 KCNA3P22001 575 aa15.43■□□□□ 0.06
HLA-DQA1-203ENST00000395363 TM4SF1P30408 202 aa15.43■□□□□ 0.06
HLA-DQA1-203ENST00000395363 EIF5P55010 431 aaKnown RBP15.43■□□□□ 0.06
HLA-DQA1-203ENST00000395363 GRIN3BO60391 1043 aa15.42■□□□□ 0.06
HLA-DQA1-203ENST00000395363 STARD3NLO95772 234 aa15.42■□□□□ 0.06
HLA-DQA1-203ENST00000395363 ZNF526Q8TF50 670 aaPredicted RBP15.42■□□□□ 0.06
HLA-DQA1-203ENST00000395363 RRP7AQ9Y3A4 280 aaKnown RBP15.42■□□□□ 0.06
HLA-DQA1-203ENST00000395363 NFE2L2Q16236 605 aa15.41■□□□□ 0.06
HLA-DQA1-203ENST00000395363 TBC1D9BQ66K14 1250 aa15.41■□□□□ 0.06
HLA-DQA1-203ENST00000395363 MYBBP1AQ9BQG0 1328 aaKnown RBP15.41■□□□□ 0.06
HLA-DQA1-203ENST00000395363 ADCY9O60503 1353 aa15.4■□□□□ 0.06
HLA-DQA1-203ENST00000395363 RALBP1Q15311 655 aa15.4■□□□□ 0.06
HLA-DQA1-203ENST00000395363 TNRC6CQ9HCJ0 1690 aaKnown RBP15.4■□□□□ 0.06
HLA-DQA1-203ENST00000395363 SLX4Q8IY92 1834 aa15.4■□□□□ 0.06
HLA-DQA1-203ENST00000395363 MAPK8IP3Q9UPT6 1336 aa15.4■□□□□ 0.06
HLA-DQA1-203ENST00000395363 NBPF26B4DH59 902 aa15.39■□□□□ 0.05
HLA-DQA1-203ENST00000395363 NBPF10Q6P3W6 841 aaKnown RBP15.39■□□□□ 0.05
HLA-DQA1-203ENST00000395363 NBPF15Q8N660 670 aa15.39■□□□□ 0.05
HLA-DQA1-203ENST00000395363 TIAM2Q8IVF5 1701 aa15.39■□□□□ 0.05
HLA-DQA1-203ENST00000395363 SENP3-EIF4A1A0A087X0R7 540 aa15.38■□□□□ 0.05
HLA-DQA1-203ENST00000395363 CAMTA2O94983 1202 aa15.38■□□□□ 0.05
HLA-DQA1-203ENST00000395363 SERPINB2P05120 415 aa15.38■□□□□ 0.05
HLA-DQA1-203ENST00000395363 TGFB2P61812 414 aa15.38■□□□□ 0.05
HLA-DQA1-203ENST00000395363 ARFGEF2Q9Y6D5 1785 aa15.38■□□□□ 0.05
HLA-DQA1-203ENST00000395363 CEP350Q5VT06 3117 aa15.37■□□□□ 0.05
HLA-DQA1-203ENST00000395363 TAF7Q15545 349 aaPredicted RBP15.37■□□□□ 0.05
HLA-DQA1-203ENST00000395363 NEUROD2Q15784 382 aa15.37■□□□□ 0.05
HLA-DQA1-203ENST00000395363 FER1L6Q2WGJ9 1857 aa15.36■□□□□ 0.05
HLA-DQA1-203ENST00000395363 HTATSF1O43719 755 aaKnown RBP15.36■□□□□ 0.05
HLA-DQA1-203ENST00000395363 SNRPA1P09661 255 aaKnown RBP15.36■□□□□ 0.05
HLA-DQA1-203ENST00000395363 IL6STP40189 918 aaPredicted RBP15.36■□□□□ 0.05
HLA-DQA1-203ENST00000395363 ARHGAP27Q6ZUM4 889 aa15.36■□□□□ 0.05
HLA-DQA1-203ENST00000395363 DZIP3Q86Y13 1208 aaKnown RBP15.36■□□□□ 0.05
HLA-DQA1-203ENST00000395363 NGEFQ8N5V2 710 aa15.36■□□□□ 0.05
HLA-DQA1-203ENST00000395363 ANKRD36CQ5JPF3 1778 aa15.36■□□□□ 0.05
HLA-DQA1-203ENST00000395363 NEFMP07197 916 aa15.35■□□□□ 0.05
HLA-DQA1-203ENST00000395363 RIPK4P57078 832 aa15.35■□□□□ 0.05
HLA-DQA1-203ENST00000395363 TEX13AQ9BXU3 409 aaPredicted RBP15.35■□□□□ 0.05
HLA-DQA1-203ENST00000395363 PRKRIP1Q9H875 184 aaPredicted RBP15.35■□□□□ 0.05
HLA-DQA1-203ENST00000395363 DICER1Q9UPY3 1922 aaKnown RBP15.35■□□□□ 0.05
HLA-DQA1-203ENST00000395363 FAM177BA6PVY3 158 aa15.34■□□□□ 0.05
HLA-DQA1-203ENST00000395363 NPM3O75607 178 aaKnown RBP15.34■□□□□ 0.05
HLA-DQA1-203ENST00000395363 EIF4A1P60842 406 aaKnown RBP15.34■□□□□ 0.05
HLA-DQA1-203ENST00000395363 RASSF7Q02833 373 aa15.34■□□□□ 0.05
HLA-DQA1-203ENST00000395363 CCDC184Q52MB2 194 aa15.34■□□□□ 0.05
HLA-DQA1-203ENST00000395363 PRR5LQ6MZQ0 368 aa15.34■□□□□ 0.05
HLA-DQA1-203ENST00000395363 A0A087WZG4 1122 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms