RNA–Protein interactions for RNA: ENST00000395253.3

FAM220CP-201, Transcript of family with sequence similarity 220 member C, pseudogene, humanhuman

BASIC

Gene FAM220CP, Length 831 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM220CP-201ENST00000395253 RTF1Q92541 710 aaKnown RBP23.37■■□□□ 1.33
FAM220CP-201ENST00000395253 ASAP1Q9ULH1 1129 aa23.37■■□□□ 1.33
FAM220CP-201ENST00000395253 HTATSF1O43719 755 aaKnown RBP23.36■■□□□ 1.33
FAM220CP-201ENST00000395253 DPEP1P16444 411 aa23.36■■□□□ 1.33
FAM220CP-201ENST00000395253 ERVV-2B6SEH9 535 aa23.35■■□□□ 1.33
FAM220CP-201ENST00000395253 PARP3Q9Y6F1 533 aa23.35■■□□□ 1.33
FAM220CP-201ENST00000395253 C4AP0C0L4 1744 aa23.35■■□□□ 1.33
FAM220CP-201ENST00000395253 CAPN15O75808 1086 aa23.34■■□□□ 1.33
FAM220CP-201ENST00000395253 TMPOP42166 694 aaKnown RBP23.34■■□□□ 1.33
FAM220CP-201ENST00000395253 LMOD3Q0VAK6 560 aa23.34■■□□□ 1.33
FAM220CP-201ENST00000395253 RNMTO43148 476 aaKnown RBP23.33■■□□□ 1.33
FAM220CP-201ENST00000395253 PRELPP51888 382 aa23.33■■□□□ 1.33
FAM220CP-201ENST00000395253 HTRA3P83110 453 aa23.33■■□□□ 1.33
FAM220CP-201ENST00000395253 KDM6AO15550 1401 aaPredicted RBP23.33■■□□□ 1.32
FAM220CP-201ENST00000395253 BRCA1P38398 1863 aaKnown RBP23.32■■□□□ 1.32
FAM220CP-201ENST00000395253 RIPK4P57078 832 aa23.32■■□□□ 1.32
FAM220CP-201ENST00000395253 ATG3Q9NT62 314 aa23.32■■□□□ 1.32
FAM220CP-201ENST00000395253 KCPQ6ZWJ8 1503 aa23.32■■□□□ 1.32
FAM220CP-201ENST00000395253 APAF1O14727 1248 aa23.31■■□□□ 1.32
FAM220CP-201ENST00000395253 RFC4P35249 363 aa23.31■■□□□ 1.32
FAM220CP-201ENST00000395253 CABP4P57796 275 aa23.31■■□□□ 1.32
FAM220CP-201ENST00000395253 RC3H1Q5TC82 1133 aaKnown RBP23.31■■□□□ 1.32
FAM220CP-201ENST00000395253 PIM2Q9P1W9 311 aa23.31■■□□□ 1.32
FAM220CP-201ENST00000395253 ARFGEF1Q9Y6D6 1849 aa23.31■■□□□ 1.32
FAM220CP-201ENST00000395253 CNTNAP4Q9C0A0 1308 aa23.31■■□□□ 1.32
FAM220CP-201ENST00000395253 ZNF831Q5JPB2 1677 aa23.3■■□□□ 1.32
FAM220CP-201ENST00000395253 GYS1P13807 737 aa23.3■■□□□ 1.32
FAM220CP-201ENST00000395253 SMC1BQ8NDV3 1235 aa23.3■■□□□ 1.32
FAM220CP-201ENST00000395253 LGR6Q9HBX8 967 aa23.3■■□□□ 1.32
FAM220CP-201ENST00000395253 RNF181Q9P0P0 153 aa23.3■■□□□ 1.32
FAM220CP-201ENST00000395253 TNRC6CQ9HCJ0 1690 aaKnown RBP23.29■■□□□ 1.32
FAM220CP-201ENST00000395253 TEFQ10587 303 aa23.29■■□□□ 1.32
FAM220CP-201ENST00000395253 NEUROD2Q15784 382 aa23.29■■□□□ 1.32
FAM220CP-201ENST00000395253 DALRD3Q5D0E6 543 aaKnown RBP23.29■■□□□ 1.32
FAM220CP-201ENST00000395253 IL17REQ8NFR9 667 aa23.29■■□□□ 1.32
FAM220CP-201ENST00000395253 ARHGEF1Q92888 912 aaKnown RBP23.29■■□□□ 1.32
FAM220CP-201ENST00000395253 RRP7AQ9Y3A4 280 aaKnown RBP23.29■■□□□ 1.32
FAM220CP-201ENST00000395253 CEMIPQ8WUJ3 1361 aa23.27■■□□□ 1.32
FAM220CP-201ENST00000395253 RPS6KA4O75676 772 aa23.27■■□□□ 1.32
FAM220CP-201ENST00000395253 MCM10Q7L590 875 aa23.27■■□□□ 1.32
FAM220CP-201ENST00000395253 SLC52A2Q9HAB3 445 aa23.27■■□□□ 1.32
FAM220CP-201ENST00000395253 ZC3H4Q9UPT8 1303 aaKnown RBP23.27■■□□□ 1.32
FAM220CP-201ENST00000395253 KCNA3P22001 575 aa23.26■■□□□ 1.31
FAM220CP-201ENST00000395253 NCBP3Q53F19 620 aaKnown RBP23.26■■□□□ 1.31
FAM220CP-201ENST00000395253 NGEFQ8N5V2 710 aa23.26■■□□□ 1.31
FAM220CP-201ENST00000395253 NFATC2IPQ8NCF5 419 aa23.25■■□□□ 1.31
FAM220CP-201ENST00000395253 RBM42Q9BTD8 480 aaKnown RBP23.25■■□□□ 1.31
FAM220CP-201ENST00000395253 RRAGCQ9HB90 399 aa23.25■■□□□ 1.31
FAM220CP-201ENST00000395253 MRC1P22897 1456 aa23.24■■□□□ 1.31
FAM220CP-201ENST00000395253 DCTN1Q14203 1278 aa23.24■■□□□ 1.31
FAM220CP-201ENST00000395253 ADAMTS7Q9UKP4 1686 aa23.24■■□□□ 1.31
FAM220CP-201ENST00000395253 COL5A3P25940 1745 aaPredicted RBP23.23■■□□□ 1.31
FAM220CP-201ENST00000395253 SLC4A9Q96Q91 983 aa23.22■■□□□ 1.31
FAM220CP-201ENST00000395253 TRIM35Q9UPQ4 493 aa23.22■■□□□ 1.31
FAM220CP-201ENST00000395253 PCNTO95613 3336 aa23.22■■□□□ 1.31
FAM220CP-201ENST00000395253 CALD1Q05682 793 aaKnown RBP23.21■■□□□ 1.31
FAM220CP-201ENST00000395253 CCDC27Q2M243 656 aa23.21■■□□□ 1.31
FAM220CP-201ENST00000395253 SCN11AQ9UI33 1791 aa23.2■■□□□ 1.3
FAM220CP-201ENST00000395253 HSPA1AP0DMV8 641 aaKnown RBP23.2■■□□□ 1.3
FAM220CP-201ENST00000395253 HSPA1BP0DMV9 641 aaKnown RBP23.2■■□□□ 1.3
FAM220CP-201ENST00000395253 TAF7Q15545 349 aaPredicted RBP23.19■■□□□ 1.3
FAM220CP-201ENST00000395253 USP42Q9H9J4 1324 aaKnown RBP23.18■■□□□ 1.3
FAM220CP-201ENST00000395253 THUMPD2Q9BTF0 503 aaKnown RBP23.18■■□□□ 1.3
FAM220CP-201ENST00000395253 BTBD11A6QL63 1104 aa23.17■■□□□ 1.3
FAM220CP-201ENST00000395253 VEGFAP15692 232 aaPredicted RBP23.16■■□□□ 1.3
FAM220CP-201ENST00000395253 TTC5Q8N0Z6 440 aa23.16■■□□□ 1.3
FAM220CP-201ENST00000395253 CHRNA5P30532 468 aa23.15■■□□□ 1.3
FAM220CP-201ENST00000395253 DDR1Q08345 913 aa23.15■■□□□ 1.3
FAM220CP-201ENST00000395253 FKBP8Q14318 412 aa23.15■■□□□ 1.3
FAM220CP-201ENST00000395253 WWC1Q8IX03 1113 aa23.15■■□□□ 1.3
FAM220CP-201ENST00000395253 BABAM1Q9NWV8 329 aa23.15■■□□□ 1.3
FAM220CP-201ENST00000395253 DLG5Q8TDM6 1919 aa23.14■■□□□ 1.3
FAM220CP-201ENST00000395253 LMNB1P20700 586 aa23.14■■□□□ 1.29
FAM220CP-201ENST00000395253 CRKLP46109 303 aaKnown RBP23.14■■□□□ 1.29
FAM220CP-201ENST00000395253 SALL2Q9Y467 1007 aaPredicted RBP23.14■■□□□ 1.29
FAM220CP-201ENST00000395253 SBF1O95248 1867 aa23.13■■□□□ 1.29
FAM220CP-201ENST00000395253 MYH14Q7Z406 1995 aaKnown RBP23.13■■□□□ 1.29
FAM220CP-201ENST00000395253 GLTPD2A6NH11 291 aa23.13■■□□□ 1.29
FAM220CP-201ENST00000395253 ZNF790Q6PG37 636 aa23.13■■□□□ 1.29
FAM220CP-201ENST00000395253 SRP68Q9UHB9 627 aaKnown RBP23.13■■□□□ 1.29
FAM220CP-201ENST00000395253 SLC39A6Q13433 755 aa23.12■■□□□ 1.29
FAM220CP-201ENST00000395253 POLRMTO00411 1230 aaKnown RBP23.11■■□□□ 1.29
FAM220CP-201ENST00000395253 TSPYL4Q9UJ04 414 aa23.11■■□□□ 1.29
FAM220CP-201ENST00000395253 PTCD1O75127 700 aaKnown RBP23.1■■□□□ 1.29
FAM220CP-201ENST00000395253 GNAI1P63096 354 aa23.1■■□□□ 1.29
FAM220CP-201ENST00000395253 RASSF7Q02833 373 aa23.1■■□□□ 1.29
FAM220CP-201ENST00000395253 WDR63Q8IWG1 891 aa23.1■■□□□ 1.29
FAM220CP-201ENST00000395253 CFAP44Q96MT7 982 aa23.1■■□□□ 1.29
FAM220CP-201ENST00000395253 IFT57Q9NWB7 429 aa23.1■■□□□ 1.29
FAM220CP-201ENST00000395253 IL16Q14005 1332 aa23.09■■□□□ 1.29
FAM220CP-201ENST00000395253 LAS1LQ9Y4W2 734 aaKnown RBP23.09■■□□□ 1.29
FAM220CP-201ENST00000395253 ZPR1O75312 459 aa23.08■■□□□ 1.29
FAM220CP-201ENST00000395253 FMNL2Q96PY5 1086 aa23.08■■□□□ 1.29
FAM220CP-201ENST00000395253 MIS18AQ9NYP9 233 aa23.08■■□□□ 1.29
FAM220CP-201ENST00000395253 CHL1O00533 1208 aa23.07■■□□□ 1.28
FAM220CP-201ENST00000395253 TM4SF1P30408 202 aa23.07■■□□□ 1.28
FAM220CP-201ENST00000395253 VIRMAQ69YN4 1812 aaKnown RBP23.07■■□□□ 1.28
FAM220CP-201ENST00000395253 SIPA1L3O60292 1781 aaPredicted RBP23.06■■□□□ 1.28
FAM220CP-201ENST00000395253 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
FAM220CP-201ENST00000395253 VSIG10Q8N0Z9 540 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms