RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 HDAC9Q9UKV0 1011 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 ZMIZ1Q9ULJ6 1067 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 MPHOSPH10O00566 681 aaKnown RBP5.17□□□□□ -1.58
HERC4-204ENST00000395198 HMMRO75330 724 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 ATICP31939 592 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 Q3C1V9 767 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 RC3H1Q5TC82 1133 aaKnown RBP5.17□□□□□ -1.58
HERC4-204ENST00000395198 MYO1HQ8N1T3 1032 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 HELQQ8TDG4 1101 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 STK32AQ8WU08 396 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 GOLGA1Q92805 767 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 PPCSQ9HAB8 311 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 ASAP1Q9ULH1 1129 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 RABL2BQ9UNT1 228 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 CAPN2P17655 700 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 WDR75Q8IWA0 830 aaKnown RBP5.17□□□□□ -1.58
HERC4-204ENST00000395198 JARID2Q92833 1246 aaPredicted RBP5.17□□□□□ -1.58
HERC4-204ENST00000395198 ARNT2Q9HBZ2 717 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 RAD54L2Q9Y4B4 1467 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 hCG_1984214I3L0E3 225 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 PPFIA3O75145 1194 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 CASQ1P31415 396 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 HMGN5P82970 282 aaKnown RBP5.17□□□□□ -1.58
HERC4-204ENST00000395198 CCDC15Q0P6D6 951 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 OSBPL2Q9H1P3 480 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 RYDENQ9NUL5 291 aaKnown RBP5.17□□□□□ -1.58
HERC4-204ENST00000395198 POLG2Q9UHN1 485 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 GJC2Q5T442 439 aaPredicted RBP5.16□□□□□ -1.58
HERC4-204ENST00000395198 ODF2LQ9ULJ1 636 aa5.16□□□□□ -1.58
HERC4-204ENST00000395198 TTLL12Q14166 644 aaPredicted RBP5.16□□□□□ -1.58
HERC4-204ENST00000395198 ESCO1Q5FWF5 840 aa5.16□□□□□ -1.58
HERC4-204ENST00000395198 ZBTB47Q9UFB7 747 aaPredicted RBP5.16□□□□□ -1.58
HERC4-204ENST00000395198 ZNF232Q9UNY5 417 aa5.16□□□□□ -1.58
HERC4-204ENST00000395198 MRPS23Q9Y3D9 190 aaKnown RBP5.16□□□□□ -1.58
HERC4-204ENST00000395198 SEPT2Q15019 361 aa5.16□□□□□ -1.58
HERC4-204ENST00000395198 ZNF394Q53GI3 561 aa5.16□□□□□ -1.58
HERC4-204ENST00000395198 ERAP2Q6P179 960 aa5.16□□□□□ -1.58
HERC4-204ENST00000395198 CATIPQ7Z7H3 387 aa5.16□□□□□ -1.58
HERC4-204ENST00000395198 IQCF2Q8IXL9 164 aa5.16□□□□□ -1.58
HERC4-204ENST00000395198 CEP89Q96ST8 783 aa5.16□□□□□ -1.58
HERC4-204ENST00000395198 GMLQ99445 158 aa5.16□□□□□ -1.58
HERC4-204ENST00000395198 NBPF3Q9H094 633 aa5.16□□□□□ -1.58
HERC4-204ENST00000395198 POLR3EQ9NVU0 708 aa5.16□□□□□ -1.58
HERC4-204ENST00000395198 EIF4G1Q04637 1599 aaKnown RBP5.16□□□□□ -1.58
HERC4-204ENST00000395198 MINK1Q8N4C8 1332 aaPredicted RBP5.16□□□□□ -1.58
HERC4-204ENST00000395198 C19orf81C9J6K1 198 aa5.15□□□□□ -1.58
HERC4-204ENST00000395198 LMOD1P29536 600 aaPredicted RBP5.15□□□□□ -1.58
HERC4-204ENST00000395198 ABCD1P33897 745 aa5.15□□□□□ -1.58
HERC4-204ENST00000395198 MECOMQ03112 1051 aa5.15□□□□□ -1.58
HERC4-204ENST00000395198 NFX1Q12986 1120 aaKnown RBP5.15□□□□□ -1.58
HERC4-204ENST00000395198 MAP2K5Q13163 448 aa5.15□□□□□ -1.58
HERC4-204ENST00000395198 MLECQ14165 292 aa5.15□□□□□ -1.58
HERC4-204ENST00000395198 UBE2Q1Q7Z7E8 422 aa5.15□□□□□ -1.58
HERC4-204ENST00000395198 NDUFAF2Q8N183 169 aa5.15□□□□□ -1.58
HERC4-204ENST00000395198 RMI1Q9H9A7 625 aa5.15□□□□□ -1.58
HERC4-204ENST00000395198 FAM160A1Q05DH4 1040 aa5.15□□□□□ -1.58
HERC4-204ENST00000395198 TMEM164Q5U3C3 297 aa5.15□□□□□ -1.58
HERC4-204ENST00000395198 CCSAPQ6IQ19 270 aaPredicted RBP5.15□□□□□ -1.58
HERC4-204ENST00000395198 WAPLQ7Z5K2 1190 aa5.15□□□□□ -1.58
HERC4-204ENST00000395198 ZBTB9Q96C00 473 aa5.15□□□□□ -1.58
HERC4-204ENST00000395198 CDHR1Q96JP9 859 aa5.15□□□□□ -1.58
HERC4-204ENST00000395198 PAIP2Q9BPZ3 127 aaKnown RBP5.15□□□□□ -1.58
HERC4-204ENST00000395198 DNAJC6O75061 913 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 DNAJA1P31689 397 aaKnown RBP5.15□□□□□ -1.59
HERC4-204ENST00000395198 NFE2L2Q16236 605 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 PDXDC2PQ6P474 469 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 APPL2Q8NEU8 664 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 NEK9Q8TD19 979 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 FMNL2Q96PY5 1086 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 RNF19AQ9NV58 838 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 RBM28Q9NW13 759 aaKnown RBP5.15□□□□□ -1.59
HERC4-204ENST00000395198 SUPT16HQ9Y5B9 1047 aaKnown RBP5.15□□□□□ -1.59
HERC4-204ENST00000395198 ENPP3O14638 875 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 GPR37L1O60883 481 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 TNNT2P45379 298 aaPredicted RBP5.15□□□□□ -1.59
HERC4-204ENST00000395198 DMTNQ08495 405 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 VPS72Q15906 364 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 ELOA2Q8IYF1 753 aaPredicted RBP5.15□□□□□ -1.59
HERC4-204ENST00000395198 PGBD3Q8N328 593 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 CCDC89Q8N998 374 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 CAPN10Q9HC96 672 aa5.15□□□□□ -1.59
HERC4-204ENST00000395198 SLC26A4O43511 780 aa5.14□□□□□ -1.59
HERC4-204ENST00000395198 GLULP15104 373 aa5.14□□□□□ -1.59
HERC4-204ENST00000395198 FXNQ16595 210 aa5.14□□□□□ -1.59
HERC4-204ENST00000395198 KIAA1614Q5VZ46 1190 aa5.14□□□□□ -1.59
HERC4-204ENST00000395198 JAKMIP3Q5VZ66 844 aa5.14□□□□□ -1.59
HERC4-204ENST00000395198 SLC43A3Q8NBI5 491 aa5.14□□□□□ -1.59
HERC4-204ENST00000395198 CHL1O00533 1208 aa5.14□□□□□ -1.59
HERC4-204ENST00000395198 CENPTQ96BT3 561 aa5.14□□□□□ -1.59
HERC4-204ENST00000395198 RNPC3Q96LT9 517 aaKnown RBP5.14□□□□□ -1.59
HERC4-204ENST00000395198 ZNF396Q96N95 335 aaPredicted RBP5.14□□□□□ -1.59
HERC4-204ENST00000395198 LGR6Q9HBX8 967 aa5.14□□□□□ -1.59
HERC4-204ENST00000395198 KLHL33A6NCF5 533 aa5.14□□□□□ -1.59
HERC4-204ENST00000395198 SCAMP3O14828 347 aaKnown RBP5.14□□□□□ -1.59
HERC4-204ENST00000395198 RAPGEF1Q13905 1077 aa5.14□□□□□ -1.59
HERC4-204ENST00000395198 L1TD1Q5T7N2 865 aaKnown RBP5.14□□□□□ -1.59
HERC4-204ENST00000395198 ANKRD45Q5TZF3 282 aa5.14□□□□□ -1.59
HERC4-204ENST00000395198 SLC27A2O14975 620 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 CDC27P30260 824 aa5.13□□□□□ -1.59
HERC4-204ENST00000395198 ANP32AP39687 249 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms