RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 CICQ96RK0 1608 aaPredicted RBP15.61■□□□□ 0.09
GTF2IRD2B-201ENST00000394939 ELL2O00472 640 aaPredicted RBP15.6■□□□□ 0.09
GTF2IRD2B-201ENST00000394939 EN1Q05925 392 aaPredicted RBP15.6■□□□□ 0.09
GTF2IRD2B-201ENST00000394939 KRT24Q2M2I5 525 aa15.6■□□□□ 0.09
GTF2IRD2B-201ENST00000394939 DNAJC10Q8IXB1 793 aa15.6■□□□□ 0.09
GTF2IRD2B-201ENST00000394939 ZNF428Q96B54 188 aa15.6■□□□□ 0.09
GTF2IRD2B-201ENST00000394939 CAMKK2Q96RR4 588 aa15.6■□□□□ 0.09
GTF2IRD2B-201ENST00000394939 HDGFL1Q5TGJ6 251 aa15.59■□□□□ 0.09
GTF2IRD2B-201ENST00000394939 CCDC30Q5VVM6 783 aa15.59■□□□□ 0.09
GTF2IRD2B-201ENST00000394939 SLC4A9Q96Q91 983 aa15.59■□□□□ 0.09
GTF2IRD2B-201ENST00000394939 ERBB4Q15303 1308 aa15.59■□□□□ 0.09
GTF2IRD2B-201ENST00000394939 LAMB4A4D0S4 1761 aa15.59■□□□□ 0.09
GTF2IRD2B-201ENST00000394939 TJP1Q07157 1748 aa15.58■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 VAMP4O75379 141 aa15.58■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 EIF2S2P20042 333 aaKnown RBP15.58■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 ITPK1Q13572 414 aa15.58■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 EZH2Q15910 746 aaKnown RBP15.58■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 DEFB132Q7Z7B7 95 aa15.58■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 TSPYL6Q8N831 410 aa15.58■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 STK31Q9BXU1 1019 aa15.58■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 C5P01031 1676 aa15.57■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 CYP19A1P11511 503 aaPredicted RBP15.57■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 NPM2Q86SE8 214 aaKnown RBP15.57■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 USP16Q9Y5T5 823 aa15.57■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 CNTNAP4Q9C0A0 1308 aa15.57■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 PRAMEF22A3QJZ6 481 aa15.56■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 KCNQ4P56696 695 aa15.56■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 RC3H1Q5TC82 1133 aaKnown RBP15.56■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 PROM2Q8N271 834 aa15.56■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 AK7Q96M32 723 aa15.56■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 LRRC4BQ9NT99 713 aa15.56■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 CCDC87Q9NVE4 849 aa15.56■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 TAF1LQ8IZX4 1826 aa15.56■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 COL5A3P25940 1745 aaPredicted RBP15.55■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 CRKLP46109 303 aaKnown RBP15.55■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 LINC00116Q8NCU8 138 aa15.55■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 DBF4Q9UBU7 674 aaPredicted RBP15.55■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 RREB1Q92766 1687 aa15.54■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 ALDH1L2Q3SY69 923 aa15.54■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 NBPF14Q5TI25 921 aa15.54■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 NECTIN2Q92692 538 aa15.54■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 C4BP0C0L5 1744 aa15.54■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 CACNA1FO60840 1977 aa15.53■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 A1BGP04217 495 aa15.53■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 DDX21Q9NR30 783 aaKnown RBP eCLIP15.53■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 HYPKQ9NX55 129 aa15.53■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 STK32BQ9NY57 414 aa15.53■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 CHPF2Q9P2E5 772 aa15.53■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 GNPATO15228 680 aa15.52■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 CANXP27824 592 aaKnown RBP15.52■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 RTCBQ9Y3I0 505 aaKnown RBP15.52■□□□□ 0.08
GTF2IRD2B-201ENST00000394939 A0A087WZG4 1122 aa15.51■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 CENPBP07199 599 aaPredicted RBP15.51■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 IL6STP40189 918 aaPredicted RBP15.51■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 INTS5Q6P9B9 1019 aaKnown RBP15.51■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 SMC4Q9NTJ3 1288 aa15.51■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 TFCP2L1Q9NZI6 479 aa15.51■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 ZBTB1Q9Y2K1 713 aa15.51■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 NUP188Q5SRE5 1749 aa15.51■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 MYH14Q7Z406 1995 aaKnown RBP15.5■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 RPS6KA4O75676 772 aa15.5■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 MYL6BP14649 208 aa15.5■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 RARSP54136 660 aaKnown RBP15.5■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 FLAD1Q8NFF5 587 aa15.5■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 RCAN3Q9UKA8 241 aa15.5■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 ZNF330Q9Y3S2 320 aaPredicted RBP15.5■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 NBPF26B4DH59 902 aa15.49■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 TCERG1O14776 1098 aaKnown RBP15.49■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 SSFA2P28290 1259 aa15.49■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 NBPF10Q6P3W6 841 aaKnown RBP15.49■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 NBPF15Q8N660 670 aa15.49■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 SSH1Q8WYL5 1049 aa15.49■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 AKT1S1Q96B36 256 aa15.49■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 DDX58O95786 925 aaKnown RBP15.48■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 PIP4K2AP48426 406 aaPredicted RBP15.48■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 EIF5P55010 431 aaKnown RBP15.48■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 PDIA6Q15084 440 aa15.48■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 SLC15A2Q16348 729 aa15.48■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 TRAPPC3LQ5T215 181 aa15.48■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 KIF6Q6ZMV9 814 aa15.48■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 COL15A1P39059 1388 aa15.48■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 KIF16BQ96L93 1317 aa15.47■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 ANXA1P04083 346 aa15.47■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 BRPF1P55201 1214 aaPredicted RBP15.47■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 PROSER3Q2NL68 480 aa15.47■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 ARXQ96QS3 562 aa15.47■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 BCL2L13Q9BXK5 485 aa15.47■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 UBR3Q6ZT12 1888 aa15.46■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 IPO8O15397 1037 aaKnown RBP15.46■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 PHF14O94880 888 aa15.46■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 ZNF827Q17R98 1081 aa15.46■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 MRPL50Q8N5N7 158 aaKnown RBP15.46■□□□□ 0.07
GTF2IRD2B-201ENST00000394939 PTPRCP08575 1304 aa15.45■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.45■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 ZPR1O75312 459 aa15.45■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 RFC4P35249 363 aa15.45■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 AIMP1Q12904 312 aaKnown RBP15.45■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 FLIIQ13045 1269 aa15.45■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 FKBP5Q13451 457 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms