RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
PSEN1-204ENST00000394164 TRIM6-TRIM34B2RNG4 842 aa12.11□□□□□ -0.47
PSEN1-204ENST00000394164 ZNF445P59923 1031 aa12.11□□□□□ -0.47
PSEN1-204ENST00000394164 GPT2Q8TD30 523 aa12.11□□□□□ -0.47
PSEN1-204ENST00000394164 LMBRD1Q9NUN5 540 aa12.11□□□□□ -0.47
PSEN1-204ENST00000394164 ARHGEF10O15013 1369 aa12.1□□□□□ -0.47
PSEN1-204ENST00000394164 ATP10DQ9P241 1426 aa12.1□□□□□ -0.47
PSEN1-204ENST00000394164 ZNF710Q8N1W2 664 aa12.1□□□□□ -0.47
PSEN1-204ENST00000394164 GNAI2P04899 355 aa12.1□□□□□ -0.47
PSEN1-204ENST00000394164 CCDC30Q5VVM6 783 aa12.1□□□□□ -0.47
PSEN1-204ENST00000394164 CCDC39Q9UFE4 941 aa12.1□□□□□ -0.47
PSEN1-204ENST00000394164 TAF7Q15545 349 aaPredicted RBP12.09□□□□□ -0.47
PSEN1-204ENST00000394164 ANKLE2Q86XL3 938 aa12.09□□□□□ -0.47
PSEN1-204ENST00000394164 DDX17Q92841 729 aaKnown RBP12.09□□□□□ -0.47
PSEN1-204ENST00000394164 PDLIM2Q96JY6 352 aa12.09□□□□□ -0.47
PSEN1-204ENST00000394164 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.09□□□□□ -0.47
PSEN1-204ENST00000394164 KIAA0232Q92628 1395 aa12.09□□□□□ -0.47
PSEN1-204ENST00000394164 HMMRO75330 724 aa12.08□□□□□ -0.47
PSEN1-204ENST00000394164 HS1BP3Q53T59 392 aa12.08□□□□□ -0.47
PSEN1-204ENST00000394164 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.47
PSEN1-204ENST00000394164 ZGPATQ8N5A5 531 aaKnown RBP12.08□□□□□ -0.47
PSEN1-204ENST00000394164 TMEM63CQ9P1W3 806 aa12.08□□□□□ -0.47
PSEN1-204ENST00000394164 CCT4P50991 539 aaKnown RBP12.08□□□□□ -0.48
PSEN1-204ENST00000394164 ZC3H6P61129 1189 aaKnown RBP12.08□□□□□ -0.48
PSEN1-204ENST00000394164 KIAA2012Q0VF49 1180 aa12.08□□□□□ -0.48
PSEN1-204ENST00000394164 UTP14CQ5TAP6 766 aaKnown RBP12.08□□□□□ -0.48
PSEN1-204ENST00000394164 PRAMEF22A3QJZ6 481 aa12.07□□□□□ -0.48
PSEN1-204ENST00000394164 ZNF530Q6P9A1 599 aaPredicted RBP12.07□□□□□ -0.48
PSEN1-204ENST00000394164 CHPF2Q9P2E5 772 aa12.07□□□□□ -0.48
PSEN1-204ENST00000394164 NRKQ7Z2Y5 1582 aa12.07□□□□□ -0.48
PSEN1-204ENST00000394164 PLCD3Q8N3E9 789 aa12.07□□□□□ -0.48
PSEN1-204ENST00000394164 CGNQ9P2M7 1197 aaKnown RBP12.07□□□□□ -0.48
PSEN1-204ENST00000394164 PDE1AP54750 535 aa12.06□□□□□ -0.48
PSEN1-204ENST00000394164 TEFQ10587 303 aa12.06□□□□□ -0.48
PSEN1-204ENST00000394164 USP26Q9BXU7 913 aa12.06□□□□□ -0.48
PSEN1-204ENST00000394164 NAP1L2Q9ULW6 460 aaPredicted RBP12.06□□□□□ -0.48
PSEN1-204ENST00000394164 MAP3K5Q99683 1374 aa12.06□□□□□ -0.48
PSEN1-204ENST00000394164 DTNBO60941 627 aa12.06□□□□□ -0.48
PSEN1-204ENST00000394164 UBTFL1P0CB47 393 aaPredicted RBP12.06□□□□□ -0.48
PSEN1-204ENST00000394164 PLCB2Q00722 1185 aa12.06□□□□□ -0.48
PSEN1-204ENST00000394164 MYRIPQ8NFW9 859 aa12.06□□□□□ -0.48
PSEN1-204ENST00000394164 TTC12Q9H892 705 aaPredicted RBP12.06□□□□□ -0.48
PSEN1-204ENST00000394164 KDRP35968 1356 aa12.06□□□□□ -0.48
PSEN1-204ENST00000394164 AIMP1Q12904 312 aaKnown RBP12.05□□□□□ -0.48
PSEN1-204ENST00000394164 CASC1Q6TDU7 716 aa12.05□□□□□ -0.48
PSEN1-204ENST00000394164 PIK3C2AO00443 1686 aa12.05□□□□□ -0.48
PSEN1-204ENST00000394164 TOPAZ1Q8N9V7 1692 aa12.05□□□□□ -0.48
PSEN1-204ENST00000394164 PI4KAP2A4QPH2 592 aa12.05□□□□□ -0.48
PSEN1-204ENST00000394164 SURF6O75683 361 aaKnown RBP12.05□□□□□ -0.48
PSEN1-204ENST00000394164 NBPF7P0C2Y1 421 aaPredicted RBP12.05□□□□□ -0.48
PSEN1-204ENST00000394164 UNC5CLQ8IV45 518 aa12.05□□□□□ -0.48
PSEN1-204ENST00000394164 PI4KAP1Q8N8J0 262 aa12.05□□□□□ -0.48
PSEN1-204ENST00000394164 LRRCC1Q9C099 1032 aa12.05□□□□□ -0.48
PSEN1-204ENST00000394164 USP44Q9H0E7 712 aa12.05□□□□□ -0.48
PSEN1-204ENST00000394164 BTBD11A6QL63 1104 aa12.05□□□□□ -0.48
PSEN1-204ENST00000394164 U2AF2P26368 475 aaKnown RBP eCLIP12.05□□□□□ -0.48
PSEN1-204ENST00000394164 LRSAM1Q6UWE0 723 aa12.04□□□□□ -0.48
PSEN1-204ENST00000394164 ANO2Q9NQ90 1003 aa12.04□□□□□ -0.48
PSEN1-204ENST00000394164 IBTKQ9P2D0 1353 aaPredicted RBP12.04□□□□□ -0.48
PSEN1-204ENST00000394164 FER1L4A9Z1Z3 1794 aa12.04□□□□□ -0.48
PSEN1-204ENST00000394164 PIP4K2AP48426 406 aaPredicted RBP12.04□□□□□ -0.48
PSEN1-204ENST00000394164 ZNF771Q7L3S4 317 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-204ENST00000394164 PPP1R42Q7Z4L9 355 aa12.03□□□□□ -0.48
PSEN1-204ENST00000394164 IP6K1Q92551 441 aa12.03□□□□□ -0.48
PSEN1-204ENST00000394164 AXIN2Q9Y2T1 843 aa12.03□□□□□ -0.48
PSEN1-204ENST00000394164 ARHGAP23Q9P227 1491 aa12.03□□□□□ -0.48
PSEN1-204ENST00000394164 SRGAP3O43295 1099 aa12.03□□□□□ -0.48
PSEN1-204ENST00000394164 GCP02774 474 aa12.03□□□□□ -0.48
PSEN1-204ENST00000394164 GNAI3P08754 354 aa12.03□□□□□ -0.48
PSEN1-204ENST00000394164 MX1P20591 662 aa12.03□□□□□ -0.48
PSEN1-204ENST00000394164 CABLES1Q8TDN4 633 aa12.03□□□□□ -0.48
PSEN1-204ENST00000394164 OS9Q13438 667 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-204ENST00000394164 PROSER3Q2NL68 480 aa12.03□□□□□ -0.48
PSEN1-204ENST00000394164 LARP6Q9BRS8 491 aaKnown RBP12.03□□□□□ -0.48
PSEN1-204ENST00000394164 NEK4P51957 841 aa12.02□□□□□ -0.49
PSEN1-204ENST00000394164 NUCB2P80303 420 aa12.02□□□□□ -0.49
PSEN1-204ENST00000394164 BCL2L12Q9HB09 334 aa12.02□□□□□ -0.49
PSEN1-204ENST00000394164 GDPD2Q9HCC8 539 aa12.02□□□□□ -0.49
PSEN1-204ENST00000394164 SLIT1O75093 1534 aa12.02□□□□□ -0.49
PSEN1-204ENST00000394164 ERC2O15083 957 aa12.02□□□□□ -0.49
PSEN1-204ENST00000394164 ATP8B2P98198 1209 aa12.02□□□□□ -0.49
PSEN1-204ENST00000394164 SLC39A6Q13433 755 aa12.02□□□□□ -0.49
PSEN1-204ENST00000394164 PROSER2Q86WR7 435 aaPredicted RBP12.02□□□□□ -0.49
PSEN1-204ENST00000394164 UPF3BQ9BZI7 483 aaKnown RBP12.02□□□□□ -0.49
PSEN1-204ENST00000394164 SRCIN1Q9C0H9 1055 aa12.02□□□□□ -0.49
PSEN1-204ENST00000394164 RGPD1P0DJD0 1748 aa12.01□□□□□ -0.49
PSEN1-204ENST00000394164 MCM5P33992 734 aa12.01□□□□□ -0.49
PSEN1-204ENST00000394164 NOLC1Q14978 699 aaKnown RBP eCLIP12.01□□□□□ -0.49
PSEN1-204ENST00000394164 PDCL2Q8N4E4 241 aa12.01□□□□□ -0.49
PSEN1-204ENST00000394164 ANKRD24Q8TF21 1146 aa12.01□□□□□ -0.49
PSEN1-204ENST00000394164 GTPBP4Q9BZE4 634 aaKnown RBP12.01□□□□□ -0.49
PSEN1-204ENST00000394164 USP25Q9UHP3 1055 aa12.01□□□□□ -0.49
PSEN1-204ENST00000394164 PALD1Q9ULE6 856 aa12.01□□□□□ -0.49
PSEN1-204ENST00000394164 KIF3AQ9Y496 699 aa12.01□□□□□ -0.49
PSEN1-204ENST00000394164 KIF24Q5T7B8 1368 aa12.01□□□□□ -0.49
PSEN1-204ENST00000394164 EIF4A1P60842 406 aaKnown RBP12.01□□□□□ -0.49
PSEN1-204ENST00000394164 C1orf141Q5JVX7 400 aa12.01□□□□□ -0.49
PSEN1-204ENST00000394164 TMEM51Q9NW97 253 aa12.01□□□□□ -0.49
PSEN1-204ENST00000394164 RABEP1Q15276 862 aa12□□□□□ -0.49
PSEN1-204ENST00000394164 CWF19L2Q2TBE0 894 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms