RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 ZRANB1Q9UGI0 708 aa27.25■■□□□ 1.95
RARA-202ENST00000394081 ITSN1Q15811 1721 aa27.25■■□□□ 1.95
RARA-202ENST00000394081 SMC3Q9UQE7 1217 aa27.25■■□□□ 1.95
RARA-202ENST00000394081 SPATA31D1Q6ZQQ2 1576 aa27.24■■□□□ 1.95
RARA-202ENST00000394081 WAPLQ7Z5K2 1190 aa27.24■■□□□ 1.95
RARA-202ENST00000394081 PYCARDQ9ULZ3 195 aa27.24■■□□□ 1.95
RARA-202ENST00000394081 PXDNLA1KZ92 1463 aa27.24■■□□□ 1.95
RARA-202ENST00000394081 SGSM2O43147 1006 aa27.24■■□□□ 1.95
RARA-202ENST00000394081 G2E3Q7L622 706 aa27.24■■□□□ 1.95
RARA-202ENST00000394081 XRN1Q8IZH2 1706 aaKnown RBP27.24■■□□□ 1.95
RARA-202ENST00000394081 F6X3S4 739 aa27.23■■□□□ 1.95
RARA-202ENST00000394081 SNX14Q9Y5W7 946 aa27.23■■□□□ 1.95
RARA-202ENST00000394081 UNC5CLQ8IV45 518 aa27.23■■□□□ 1.95
RARA-202ENST00000394081 RTF1Q92541 710 aaKnown RBP27.23■■□□□ 1.95
RARA-202ENST00000394081 RAB11FIP3O75154 756 aa27.22■■□□□ 1.95
RARA-202ENST00000394081 TAF3Q5VWG9 929 aa27.22■■□□□ 1.95
RARA-202ENST00000394081 CACNA1FO60840 1977 aa27.22■■□□□ 1.95
RARA-202ENST00000394081 SOS1Q07889 1333 aaPredicted RBP27.22■■□□□ 1.95
RARA-202ENST00000394081 PNMA6EA0A0J9YXQ4 647 aa27.21■■□□□ 1.95
RARA-202ENST00000394081 GIMAP6Q6P9H5 292 aa27.21■■□□□ 1.95
RARA-202ENST00000394081 STK31Q9BXU1 1019 aa27.21■■□□□ 1.95
RARA-202ENST00000394081 CCDC61Q9Y6R9 512 aa27.21■■□□□ 1.95
RARA-202ENST00000394081 ZBTB7CA1YPR0 619 aa27.21■■□□□ 1.95
RARA-202ENST00000394081 AP5Z1O43299 807 aa27.21■■□□□ 1.95
RARA-202ENST00000394081 FIBPO43427 364 aa27.21■■□□□ 1.95
RARA-202ENST00000394081 AK2P54819 239 aa27.21■■□□□ 1.95
RARA-202ENST00000394081 FAM200AQ8TCP9 573 aa27.21■■□□□ 1.95
RARA-202ENST00000394081 NPM1P06748 294 aaKnown RBP eCLIP27.2■■□□□ 1.95
RARA-202ENST00000394081 OGFRQ9NZT2 677 aa27.2■■□□□ 1.95
RARA-202ENST00000394081 RUFY3Q7L099 469 aa27.2■■□□□ 1.94
RARA-202ENST00000394081 ZSCAN31Q96LW9 406 aaPredicted RBP27.2■■□□□ 1.94
RARA-202ENST00000394081 NUDT16Q96DE0 195 aaKnown RBP27.19■■□□□ 1.94
RARA-202ENST00000394081 LSG1Q9H089 658 aaKnown RBP27.19■■□□□ 1.94
RARA-202ENST00000394081 SH2B1Q9NRF2 756 aaPredicted RBP27.19■■□□□ 1.94
RARA-202ENST00000394081 TTC21BQ7Z4L5 1316 aa27.19■■□□□ 1.94
RARA-202ENST00000394081 FAM208AQ9UK61 1670 aaKnown RBP27.18■■□□□ 1.94
RARA-202ENST00000394081 RICTORQ6R327 1708 aa27.18■■□□□ 1.94
RARA-202ENST00000394081 SENP3Q9H4L4 574 aaPredicted RBP27.18■■□□□ 1.94
RARA-202ENST00000394081 TSPYL4Q9UJ04 414 aa27.18■■□□□ 1.94
RARA-202ENST00000394081 SIRT1Q96EB6 747 aa27.18■■□□□ 1.94
RARA-202ENST00000394081 IL25Q9H293 177 aa27.18■■□□□ 1.94
RARA-202ENST00000394081 MTMR6Q9Y217 621 aa27.18■■□□□ 1.94
RARA-202ENST00000394081 CCDC171Q6TFL3 1326 aa27.17■■□□□ 1.94
RARA-202ENST00000394081 CRYBG1Q9Y4K1 1723 aa27.17■■□□□ 1.94
RARA-202ENST00000394081 SMTNL1A8MU46 457 aa27.17■■□□□ 1.94
RARA-202ENST00000394081 PLCB2Q00722 1185 aa27.17■■□□□ 1.94
RARA-202ENST00000394081 SSH3Q8TE77 659 aa27.17■■□□□ 1.94
RARA-202ENST00000394081 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.16■■□□□ 1.94
RARA-202ENST00000394081 ELP1O95163 1332 aa27.16■■□□□ 1.94
RARA-202ENST00000394081 FAM177BA6PVY3 158 aa27.16■■□□□ 1.94
RARA-202ENST00000394081 FLIIQ13045 1269 aa27.16■■□□□ 1.94
RARA-202ENST00000394081 CCDC30Q5VVM6 783 aa27.15■■□□□ 1.94
RARA-202ENST00000394081 TM6SF1Q9BZW5 370 aa27.15■■□□□ 1.94
RARA-202ENST00000394081 GABPB1Q06547 395 aaPredicted RBP27.15■■□□□ 1.94
RARA-202ENST00000394081 VPS53Q5VIR6 699 aa27.15■■□□□ 1.94
RARA-202ENST00000394081 NALCNQ8IZF0 1738 aa27.15■■□□□ 1.94
RARA-202ENST00000394081 RAPGEF3O95398 923 aa27.14■■□□□ 1.94
RARA-202ENST00000394081 CNTROBQ8N137 903 aa27.14■■□□□ 1.94
RARA-202ENST00000394081 PI4K2BQ8TCG2 481 aa27.14■■□□□ 1.94
RARA-202ENST00000394081 PAXBP1Q9Y5B6 917 aa27.14■■□□□ 1.94
RARA-202ENST00000394081 KIF13AQ9H1H9 1805 aa27.14■■□□□ 1.94
RARA-202ENST00000394081 DNM1Q05193 864 aaKnown RBP27.14■■□□□ 1.93
RARA-202ENST00000394081 MAP3K11Q16584 847 aa27.14■■□□□ 1.93
RARA-202ENST00000394081 HYPKQ9NX55 129 aa27.14■■□□□ 1.93
RARA-202ENST00000394081 OVOS2A0A0J9YW53 1432 aa27.13■■□□□ 1.93
RARA-202ENST00000394081 OVOS2Q6IE36 1432 aa27.13■■□□□ 1.93
RARA-202ENST00000394081 U2AF2P26368 475 aaKnown RBP eCLIP27.13■■□□□ 1.93
RARA-202ENST00000394081 NCBP1Q09161 790 aaKnown RBP27.13■■□□□ 1.93
RARA-202ENST00000394081 A2ML1A8K2U0 1454 aa27.13■■□□□ 1.93
RARA-202ENST00000394081 GJB2P29033 226 aa27.13■■□□□ 1.93
RARA-202ENST00000394081 CGNQ9P2M7 1197 aaKnown RBP27.13■■□□□ 1.93
RARA-202ENST00000394081 STAG3Q9UJ98 1225 aa27.13■■□□□ 1.93
RARA-202ENST00000394081 LRRFIP2Q9Y608 721 aaKnown RBP27.13■■□□□ 1.93
RARA-202ENST00000394081 SPC24Q8NBT2 197 aa27.12■■□□□ 1.93
RARA-202ENST00000394081 SPDYE4A6NLX3 237 aa27.11■■□□□ 1.93
RARA-202ENST00000394081 RASEFQ8IZ41 740 aa27.11■■□□□ 1.93
RARA-202ENST00000394081 KCNB2Q92953 911 aa27.11■■□□□ 1.93
RARA-202ENST00000394081 TECPR2O15040 1411 aa27.11■■□□□ 1.93
RARA-202ENST00000394081 MAP3K5Q99683 1374 aa27.11■■□□□ 1.93
RARA-202ENST00000394081 LRRC37A3O60309 1634 aa27.11■■□□□ 1.93
RARA-202ENST00000394081 HTATSF1O43719 755 aaKnown RBP27.11■■□□□ 1.93
RARA-202ENST00000394081 NUP62CLQ9H1M0 184 aa27.11■■□□□ 1.93
RARA-202ENST00000394081 CHD2O14647 1828 aaKnown RBP27.11■■□□□ 1.93
RARA-202ENST00000394081 USP42Q9H9J4 1324 aaKnown RBP27.1■■□□□ 1.93
RARA-202ENST00000394081 PEAK1Q9H792 1746 aa27.1■■□□□ 1.93
RARA-202ENST00000394081 PTGS1P23219 599 aa27.1■■□□□ 1.93
RARA-202ENST00000394081 KRT85P78386 507 aa27.1■■□□□ 1.93
RARA-202ENST00000394081 POLA2Q14181 598 aa27.1■■□□□ 1.93
RARA-202ENST00000394081 CTNNA3Q9UI47 895 aa27.1■■□□□ 1.93
RARA-202ENST00000394081 MRVI1Q9Y6F6 885 aa27.1■■□□□ 1.93
RARA-202ENST00000394081 TYRO3Q06418 890 aa27.09■■□□□ 1.93
RARA-202ENST00000394081 UBTFL1P0CB47 393 aaPredicted RBP27.09■■□□□ 1.93
RARA-202ENST00000394081 RUFY2Q8WXA3 655 aa27.09■■□□□ 1.93
RARA-202ENST00000394081 USP31Q70CQ4 1352 aa27.09■■□□□ 1.93
RARA-202ENST00000394081 KIF1BPQ96EK5 621 aa27.08■■□□□ 1.93
RARA-202ENST00000394081 USP44Q9H0E7 712 aa27.08■■□□□ 1.93
RARA-202ENST00000394081 ADGRL3Q9HAR2 1447 aa27.08■■□□□ 1.93
RARA-202ENST00000394081 KDRP35968 1356 aa27.08■■□□□ 1.92
RARA-202ENST00000394081 CASTP20810 708 aaKnown RBP27.07■■□□□ 1.92
RARA-202ENST00000394081 RBM43Q6ZSC3 357 aaKnown RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms