RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 G2E3Q7L622 706 aa31.03■■■□□ 2.56
LRFN4-202ENST00000393952 GTF3C3Q9Y5Q9 886 aa31.03■■■□□ 2.56
LRFN4-202ENST00000393952 IPO8O15397 1037 aaKnown RBP31.02■■■□□ 2.56
LRFN4-202ENST00000393952 TJP1Q07157 1748 aa31.02■■■□□ 2.56
LRFN4-202ENST00000393952 ANXA1P04083 346 aa31.01■■■□□ 2.56
LRFN4-202ENST00000393952 DNAJC10Q8IXB1 793 aa31.01■■■□□ 2.56
LRFN4-202ENST00000393952 ATF7IPQ6VMQ6 1270 aa31■■■□□ 2.55
LRFN4-202ENST00000393952 BCL11BQ9C0K0 894 aaPredicted RBP31■■■□□ 2.55
LRFN4-202ENST00000393952 DBF4Q9UBU7 674 aaPredicted RBP31■■■□□ 2.55
LRFN4-202ENST00000393952 TRIM27P14373 513 aa31■■■□□ 2.55
LRFN4-202ENST00000393952 PROSER3Q2NL68 480 aa31■■■□□ 2.55
LRFN4-202ENST00000393952 LOC102724428A0A0B4J2F2 783 aa30.98■■■□□ 2.55
LRFN4-202ENST00000393952 SIK1P57059 783 aa30.98■■■□□ 2.55
LRFN4-202ENST00000393952 PDIA6Q15084 440 aa30.98■■■□□ 2.55
LRFN4-202ENST00000393952 ARHGAP45Q92619 1136 aa30.98■■■□□ 2.55
LRFN4-202ENST00000393952 CLUAP1Q96AJ1 413 aa30.98■■■□□ 2.55
LRFN4-202ENST00000393952 TEX13AQ9BXU3 409 aaPredicted RBP30.98■■■□□ 2.55
LRFN4-202ENST00000393952 DDX21Q9NR30 783 aaKnown RBP eCLIP30.98■■■□□ 2.55
LRFN4-202ENST00000393952 PDE3AQ14432 1141 aa30.97■■■□□ 2.55
LRFN4-202ENST00000393952 PANK1Q8TE04 598 aa30.97■■■□□ 2.55
LRFN4-202ENST00000393952 TRIM37O94972 964 aa30.96■■■□□ 2.55
LRFN4-202ENST00000393952 RLBP1P12271 317 aa30.96■■■□□ 2.55
LRFN4-202ENST00000393952 FLIIQ13045 1269 aa30.96■■■□□ 2.55
LRFN4-202ENST00000393952 PHAXQ9H814 394 aaKnown RBP30.96■■■□□ 2.55
LRFN4-202ENST00000393952 PTPRCP08575 1304 aa30.96■■■□□ 2.55
LRFN4-202ENST00000393952 CICQ96RK0 1608 aaPredicted RBP30.95■■■□□ 2.55
LRFN4-202ENST00000393952 PIP4K2AP48426 406 aaPredicted RBP30.95■■■□□ 2.54
LRFN4-202ENST00000393952 DZIP1LQ8IYY4 767 aaKnown RBP30.95■■■□□ 2.54
LRFN4-202ENST00000393952 EP400Q96L91 3159 aa30.94■■■□□ 2.54
LRFN4-202ENST00000393952 A1BGP04217 495 aa30.94■■■□□ 2.54
LRFN4-202ENST00000393952 ATP6V1AP38606 617 aa30.94■■■□□ 2.54
LRFN4-202ENST00000393952 CRBNQ96SW2 442 aa30.94■■■□□ 2.54
LRFN4-202ENST00000393952 API5Q9BZZ5 524 aaKnown RBP30.94■■■□□ 2.54
LRFN4-202ENST00000393952 ZNF831Q5JPB2 1677 aa30.94■■■□□ 2.54
LRFN4-202ENST00000393952 ERBB4Q15303 1308 aa30.93■■■□□ 2.54
LRFN4-202ENST00000393952 MYL6BP14649 208 aa30.93■■■□□ 2.54
LRFN4-202ENST00000393952 FTSJ3Q8IY81 847 aaKnown RBP30.93■■■□□ 2.54
LRFN4-202ENST00000393952 HYPKQ9NX55 129 aa30.93■■■□□ 2.54
LRFN4-202ENST00000393952 LY75O60449 1722 aa30.93■■■□□ 2.54
LRFN4-202ENST00000393952 NBPF26B4DH59 902 aa30.92■■■□□ 2.54
LRFN4-202ENST00000393952 STARD3NLO95772 234 aa30.92■■■□□ 2.54
LRFN4-202ENST00000393952 MS4A1P11836 297 aa30.92■■■□□ 2.54
LRFN4-202ENST00000393952 NBPF14Q5TI25 921 aa30.92■■■□□ 2.54
LRFN4-202ENST00000393952 NBPF10Q6P3W6 841 aaKnown RBP30.92■■■□□ 2.54
LRFN4-202ENST00000393952 NBPF15Q8N660 670 aa30.92■■■□□ 2.54
LRFN4-202ENST00000393952 CYP19A1P11511 503 aaPredicted RBP30.92■■■□□ 2.54
LRFN4-202ENST00000393952 ITPK1Q13572 414 aa30.92■■■□□ 2.54
LRFN4-202ENST00000393952 FKBP5Q13451 457 aaPredicted RBP30.91■■■□□ 2.54
LRFN4-202ENST00000393952 LRP10Q7Z4F1 713 aa30.9■■■□□ 2.54
LRFN4-202ENST00000393952 EXOC6Q8TAG9 804 aa30.9■■■□□ 2.54
LRFN4-202ENST00000393952 ABCC4O15439 1325 aa30.89■■■□□ 2.54
LRFN4-202ENST00000393952 COG6Q9Y2V7 657 aa30.89■■■□□ 2.54
LRFN4-202ENST00000393952 COL5A3P25940 1745 aaPredicted RBP30.88■■■□□ 2.53
LRFN4-202ENST00000393952 F6X3S4 739 aa30.87■■■□□ 2.53
LRFN4-202ENST00000393952 KCNQ4P56696 695 aa30.87■■■□□ 2.53
LRFN4-202ENST00000393952 TMEM57Q8N5G2 664 aa30.87■■■□□ 2.53
LRFN4-202ENST00000393952 AIMP1Q12904 312 aaKnown RBP30.85■■■□□ 2.53
LRFN4-202ENST00000393952 XAGE3Q8WTP9 111 aa30.85■■■□□ 2.53
LRFN4-202ENST00000393952 CCNL1Q9UK58 526 aaPredicted RBP30.84■■■□□ 2.53
LRFN4-202ENST00000393952 COPS6Q7L5N1 327 aa30.83■■■□□ 2.53
LRFN4-202ENST00000393952 TNS1Q9HBL0 1735 aaKnown RBP30.83■■■□□ 2.53
LRFN4-202ENST00000393952 RREB1Q92766 1687 aa30.83■■■□□ 2.53
LRFN4-202ENST00000393952 MYH14Q7Z406 1995 aaKnown RBP30.83■■■□□ 2.53
LRFN4-202ENST00000393952 MVPQ14764 893 aaKnown RBP30.83■■■□□ 2.53
LRFN4-202ENST00000393952 LINC00116Q8NCU8 138 aa30.83■■■□□ 2.53
LRFN4-202ENST00000393952 ZBTB1Q9Y2K1 713 aa30.83■■■□□ 2.53
LRFN4-202ENST00000393952 ADCY9O60503 1353 aa30.82■■■□□ 2.52
LRFN4-202ENST00000393952 CRKLP46109 303 aaKnown RBP30.82■■■□□ 2.52
LRFN4-202ENST00000393952 ITPRIPQ8IWB1 547 aa30.82■■■□□ 2.52
LRFN4-202ENST00000393952 CCDC87Q9NVE4 849 aa30.82■■■□□ 2.52
LRFN4-202ENST00000393952 TAF1LQ8IZX4 1826 aa30.81■■■□□ 2.52
LRFN4-202ENST00000393952 PI4KAP2A4QPH2 592 aa30.81■■■□□ 2.52
LRFN4-202ENST00000393952 ERICH6BQ5W0A0 696 aa30.81■■■□□ 2.52
LRFN4-202ENST00000393952 INTS5Q6P9B9 1019 aaKnown RBP30.81■■■□□ 2.52
LRFN4-202ENST00000393952 PI4KAP1Q8N8J0 262 aa30.81■■■□□ 2.52
LRFN4-202ENST00000393952 SLC4A10Q6U841 1118 aa30.8■■■□□ 2.52
LRFN4-202ENST00000393952 DDX58O95786 925 aaKnown RBP30.79■■■□□ 2.52
LRFN4-202ENST00000393952 KSR2Q6VAB6 950 aa30.79■■■□□ 2.52
LRFN4-202ENST00000393952 ZNF330Q9Y3S2 320 aaPredicted RBP30.79■■■□□ 2.52
LRFN4-202ENST00000393952 N4BP2Q86UW6 1770 aaPredicted RBP30.78■■■□□ 2.52
LRFN4-202ENST00000393952 APBA3O96018 575 aa30.78■■■□□ 2.52
LRFN4-202ENST00000393952 INTS3Q68E01 1043 aaKnown RBP30.78■■■□□ 2.52
LRFN4-202ENST00000393952 TTLL7Q6ZT98 887 aa30.77■■■□□ 2.52
LRFN4-202ENST00000393952 DNAAF4Q8WXU2 420 aa30.77■■■□□ 2.52
LRFN4-202ENST00000393952 MAP3K2Q9Y2U5 619 aa30.77■■■□□ 2.52
LRFN4-202ENST00000393952 PXDNLA1KZ92 1463 aa30.77■■■□□ 2.52
LRFN4-202ENST00000393952 LRRC4BQ9NT99 713 aa30.75■■■□□ 2.51
LRFN4-202ENST00000393952 CNTNAP4Q9C0A0 1308 aa30.75■■■□□ 2.51
LRFN4-202ENST00000393952 IL6STP40189 918 aaPredicted RBP30.75■■■□□ 2.51
LRFN4-202ENST00000393952 ANKRD13DQ6ZTN6 518 aa30.75■■■□□ 2.51
LRFN4-202ENST00000393952 RIC3Q7Z5B4 369 aa30.75■■■□□ 2.51
LRFN4-202ENST00000393952 DDX19BQ9UMR2 479 aa30.75■■■□□ 2.51
LRFN4-202ENST00000393952 ARFGEF2Q9Y6D5 1785 aa30.74■■■□□ 2.51
LRFN4-202ENST00000393952 CCT4P50991 539 aaKnown RBP30.74■■■□□ 2.51
LRFN4-202ENST00000393952 NUP188Q5SRE5 1749 aa30.73■■■□□ 2.51
LRFN4-202ENST00000393952 PLSCR1O15162 318 aa30.73■■■□□ 2.51
LRFN4-202ENST00000393952 SLC27A3Q5K4L6 730 aa30.73■■■□□ 2.51
LRFN4-202ENST00000393952 EIF5P55010 431 aaKnown RBP30.72■■■□□ 2.51
LRFN4-202ENST00000393952 PLBD2Q8NHP8 589 aa30.72■■■□□ 2.51
LRFN4-202ENST00000393952 C4BP0C0L5 1744 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms