RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 JADE2Q9NQC1 790 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 WDR70Q9NW82 654 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 LIMCH1Q9UPQ0 1083 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 USO1O60763 962 aaKnown RBP3.78□□□□□ -1.8
PHF3-202ENST00000393387 OPHN1O60890 802 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 ADCY5O95622 1261 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 KRT10P13645 584 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 ZBTB16Q05516 673 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 KIF5AQ12840 1032 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 USP6NLQ92738 828 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 SPATA32Q96LK8 384 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 NUP88Q99567 741 aaPredicted RBP3.78□□□□□ -1.8
PHF3-202ENST00000393387 PANK2Q9BZ23 570 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 NSRP1Q9H0G5 558 aaKnown RBP3.78□□□□□ -1.8
PHF3-202ENST00000393387 PUF60Q9UHX1 559 aaKnown RBP3.78□□□□□ -1.8
PHF3-202ENST00000393387 EBAG9O00559 213 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 LACTBP83111 547 aaPredicted RBP3.78□□□□□ -1.8
PHF3-202ENST00000393387 ATP2B2Q01814 1243 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 FMNL3Q8IVF7 1028 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 KLHDC4Q8TBB5 520 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 UBA5Q9GZZ9 404 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 CDC45O75419 566 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 SFPQP23246 707 aaKnown RBP eCLIP3.78□□□□□ -1.8
PHF3-202ENST00000393387 GBP1P32455 592 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 HPDP32754 393 aaPredicted RBP3.78□□□□□ -1.8
PHF3-202ENST00000393387 MCM4P33991 863 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 WDR78Q5VTH9 848 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 FAM212AQ96EL1 285 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 MPHOSPH6Q99547 160 aaKnown RBP3.78□□□□□ -1.8
PHF3-202ENST00000393387 KCNK9Q9NPC2 374 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 FAM170AA1A519 330 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 ZSCAN12O43309 604 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 GMNNO75496 209 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 CIB2O75838 187 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 HSP90AA4PQ58FG1 418 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 CPLX4Q7Z7G2 160 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 ZNF396Q96N95 335 aaPredicted RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 PFDN4Q9NQP4 134 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 SPATS2LQ9NUQ6 558 aaKnown RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 ZKSCAN2Q63HK3 967 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 PNMA8AQ86V59 439 aaPredicted RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 ANKS4BQ8N8V4 417 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 PLEKHA4Q9H4M7 779 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 RIPOR2Q9Y4F9 1068 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 SLC4A7Q9Y6M7 1214 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 LOC102724159A0A0B4J2E5 919 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 FSD2A1L4K1 749 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 STMN1P16949 149 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 GNL1P36915 607 aaPredicted RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 KIF22Q14807 665 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 PWP2Q15269 919 aaKnown RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 E2F4Q16254 413 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 AMOTL1Q8IY63 956 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 ARL10Q8N8L6 244 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 RGS22Q8NE09 1264 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 CACTINQ8WUQ7 758 aaKnown RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 ARHGEF2Q92974 986 aaKnown RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 DDX21Q9NR30 783 aaKnown RBP eCLIP3.77□□□□□ -1.81
PHF3-202ENST00000393387 ABCF2Q9UG63 623 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 SPAG9O60271 1321 aaKnown RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 TOP1P11387 765 aaKnown RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 GFAPP14136 432 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 INPP5BP32019 993 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 ZNF131P52739 623 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 POLE2P56282 527 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 SPATS2Q86XZ4 545 aaKnown RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 CEP57L1Q8IYX8 460 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 NEUROD6Q96NK8 337 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 LUC7LQ9NQ29 371 aaKnown RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 BIN1O00499 593 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 CETN3O15182 167 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 DIAPH1O60610 1272 aaKnown RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 MCM3P25205 808 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 CCDC92Q53HC0 331 aaPredicted RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 GKAP1Q5VSY0 366 aaPredicted RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 BAIAP2L1Q9UHR4 511 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 TMEM110-MUSTN1A8MSY1 372 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 GTF2E1P29083 439 aaPredicted RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 GJC1P36383 396 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 ATP6V1AP38606 617 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 GNG11P61952 73 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 ZBTB17Q13105 803 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 MAP7Q14244 749 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 TDRD12Q587J7 1177 aaKnown RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 HOOK3Q86VS8 718 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 CACNA2D3Q8IZS8 1091 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 DDX12PQ92771 950 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 LARP6Q9BRS8 491 aaKnown RBP3.77□□□□□ -1.81
PHF3-202ENST00000393387 GDPD2Q9HCC8 539 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 DACH1Q9UI36 760 aa3.77□□□□□ -1.81
PHF3-202ENST00000393387 CEP162Q5TB80 1403 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 K7ELQ4 463 aaPredicted RBP3.76□□□□□ -1.81
PHF3-202ENST00000393387 PRC1O43663 620 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 MYO1BO43795 1136 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 HIP1RO75146 1068 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 PMS1P54277 932 aaKnown RBP3.76□□□□□ -1.81
PHF3-202ENST00000393387 NEDD9Q14511 834 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 SART3Q15020 963 aaKnown RBP3.76□□□□□ -1.81
PHF3-202ENST00000393387 AMOTQ4VCS5 1084 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 FERMT3Q86UX7 667 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms