RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 ATP10DQ9P241 1426 aa13.91□□□□□ -0.18
PDGFD-202ENST00000393158 UTRNP46939 3433 aa13.9□□□□□ -0.18
PDGFD-202ENST00000393158 ASAP1Q9ULH1 1129 aa13.9□□□□□ -0.18
PDGFD-202ENST00000393158 PHAXQ9H814 394 aaKnown RBP13.9□□□□□ -0.18
PDGFD-202ENST00000393158 TMEM57Q8N5G2 664 aa13.9□□□□□ -0.18
PDGFD-202ENST00000393158 USP16Q9Y5T5 823 aa13.89□□□□□ -0.19
PDGFD-202ENST00000393158 CDCA7Q9BWT1 371 aaPredicted RBP13.89□□□□□ -0.19
PDGFD-202ENST00000393158 NBPF26B4DH59 902 aa13.89□□□□□ -0.19
PDGFD-202ENST00000393158 NBPF14Q5TI25 921 aa13.89□□□□□ -0.19
PDGFD-202ENST00000393158 NBPF10Q6P3W6 841 aaKnown RBP13.89□□□□□ -0.19
PDGFD-202ENST00000393158 NBPF15Q8N660 670 aa13.89□□□□□ -0.19
PDGFD-202ENST00000393158 SCN7AQ01118 1682 aa13.88□□□□□ -0.19
PDGFD-202ENST00000393158 KCNQ2O43526 872 aa13.88□□□□□ -0.19
PDGFD-202ENST00000393158 HSP90AB1P08238 724 aaKnown RBP13.88□□□□□ -0.19
PDGFD-202ENST00000393158 TEFQ10587 303 aa13.88□□□□□ -0.19
PDGFD-202ENST00000393158 CHPF2Q9P2E5 772 aa13.88□□□□□ -0.19
PDGFD-202ENST00000393158 COG6Q9Y2V7 657 aa13.88□□□□□ -0.19
PDGFD-202ENST00000393158 ZBTB7BO15156 539 aaPredicted RBP13.88□□□□□ -0.19
PDGFD-202ENST00000393158 MVPQ14764 893 aaKnown RBP13.88□□□□□ -0.19
PDGFD-202ENST00000393158 PCDHB15Q9Y5E8 787 aa13.88□□□□□ -0.19
PDGFD-202ENST00000393158 KIF16BQ96L93 1317 aa13.88□□□□□ -0.19
PDGFD-202ENST00000393158 ZKSCAN2Q63HK3 967 aa13.87□□□□□ -0.19
PDGFD-202ENST00000393158 ZBTB40Q9NUA8 1239 aa13.87□□□□□ -0.19
PDGFD-202ENST00000393158 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
PDGFD-202ENST00000393158 FRAT1Q92837 279 aaPredicted RBP13.87□□□□□ -0.19
PDGFD-202ENST00000393158 CLUAP1Q96AJ1 413 aa13.87□□□□□ -0.19
PDGFD-202ENST00000393158 ANXA1P04083 346 aa13.87□□□□□ -0.19
PDGFD-202ENST00000393158 DDB1Q16531 1140 aa13.87□□□□□ -0.19
PDGFD-202ENST00000393158 B4GALNT3Q6L9W6 998 aa13.87□□□□□ -0.19
PDGFD-202ENST00000393158 EXOC5O00471 708 aa13.86□□□□□ -0.19
PDGFD-202ENST00000393158 INTS3Q68E01 1043 aaKnown RBP13.86□□□□□ -0.19
PDGFD-202ENST00000393158 EIF5BO60841 1220 aaKnown RBP13.86□□□□□ -0.19
PDGFD-202ENST00000393158 PPP4R2Q9NY27 417 aa13.86□□□□□ -0.19
PDGFD-202ENST00000393158 DDX60Q8IY21 1712 aaKnown RBP13.86□□□□□ -0.19
PDGFD-202ENST00000393158 PTPRCP08575 1304 aa13.85□□□□□ -0.19
PDGFD-202ENST00000393158 IGHDP01880 384 aa13.85□□□□□ -0.19
PDGFD-202ENST00000393158 SIRT2Q8IXJ6 389 aa13.85□□□□□ -0.19
PDGFD-202ENST00000393158 DZIP1LQ8IYY4 767 aaKnown RBP13.85□□□□□ -0.19
PDGFD-202ENST00000393158 IBTKQ9P2D0 1353 aaPredicted RBP13.85□□□□□ -0.19
PDGFD-202ENST00000393158 CABP4P57796 275 aa13.85□□□□□ -0.19
PDGFD-202ENST00000393158 FBXO41Q8TF61 875 aa13.85□□□□□ -0.19
PDGFD-202ENST00000393158 NECTIN2Q92692 538 aa13.85□□□□□ -0.19
PDGFD-202ENST00000393158 LAMB2P55268 1798 aa13.85□□□□□ -0.19
PDGFD-202ENST00000393158 COL24A1Q17RW2 1714 aa13.85□□□□□ -0.19
PDGFD-202ENST00000393158 PRIM1P49642 420 aaKnown RBP13.84□□□□□ -0.19
PDGFD-202ENST00000393158 FLIIQ13045 1269 aa13.84□□□□□ -0.19
PDGFD-202ENST00000393158 FAM182BQ5T319 152 aa13.84□□□□□ -0.19
PDGFD-202ENST00000393158 F6X3S4 739 aa13.84□□□□□ -0.19
PDGFD-202ENST00000393158 MYH3P11055 1940 aa13.83□□□□□ -0.2
PDGFD-202ENST00000393158 HDGFL1Q5TGJ6 251 aa13.83□□□□□ -0.2
PDGFD-202ENST00000393158 PIP4K2AP48426 406 aaPredicted RBP13.83□□□□□ -0.2
PDGFD-202ENST00000393158 SRCAPQ6ZRS2 3230 aa13.82□□□□□ -0.2
PDGFD-202ENST00000393158 COL4A1P02462 1669 aa13.82□□□□□ -0.2
PDGFD-202ENST00000393158 CCDC30Q5VVM6 783 aa13.82□□□□□ -0.2
PDGFD-202ENST00000393158 SKAP1Q86WV1 359 aa13.82□□□□□ -0.2
PDGFD-202ENST00000393158 TRPC5Q9UL62 973 aaPredicted RBP13.82□□□□□ -0.2
PDGFD-202ENST00000393158 A0A1B0GUL6 1792 aa13.81□□□□□ -0.2
PDGFD-202ENST00000393158 AMIGO3Q86WK7 504 aa13.81□□□□□ -0.2
PDGFD-202ENST00000393158 QTRT2Q9H974 415 aaKnown RBP13.81□□□□□ -0.2
PDGFD-202ENST00000393158 SNRPA1P09661 255 aaKnown RBP13.81□□□□□ -0.2
PDGFD-202ENST00000393158 ITPK1Q13572 414 aa13.81□□□□□ -0.2
PDGFD-202ENST00000393158 VSIG10Q8N0Z9 540 aa13.81□□□□□ -0.2
PDGFD-202ENST00000393158 FMNL2Q96PY5 1086 aa13.81□□□□□ -0.2
PDGFD-202ENST00000393158 DDX21Q9NR30 783 aaKnown RBP eCLIP13.81□□□□□ -0.2
PDGFD-202ENST00000393158 BEND3Q5T5X7 828 aa13.8□□□□□ -0.2
PDGFD-202ENST00000393158 ACSBG1Q96GR2 724 aa13.8□□□□□ -0.2
PDGFD-202ENST00000393158 TMOD3Q9NYL9 352 aa13.8□□□□□ -0.2
PDGFD-202ENST00000393158 CYP19A1P11511 503 aaPredicted RBP13.8□□□□□ -0.2
PDGFD-202ENST00000393158 SEPT12Q8IYM1 358 aa13.8□□□□□ -0.2
PDGFD-202ENST00000393158 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.79□□□□□ -0.2
PDGFD-202ENST00000393158 POTEAQ6S8J7 498 aa13.79□□□□□ -0.2
PDGFD-202ENST00000393158 QSER1Q2KHR3 1735 aa13.79□□□□□ -0.2
PDGFD-202ENST00000393158 EIF2S2P20042 333 aaKnown RBP13.79□□□□□ -0.2
PDGFD-202ENST00000393158 INTS5Q6P9B9 1019 aaKnown RBP13.79□□□□□ -0.2
PDGFD-202ENST00000393158 DBF4Q9UBU7 674 aaPredicted RBP13.79□□□□□ -0.2
PDGFD-202ENST00000393158 IGKV5-2P06315 115 aa13.78□□□□□ -0.2
PDGFD-202ENST00000393158 KAZALD1Q96I82 304 aa13.78□□□□□ -0.2
PDGFD-202ENST00000393158 A1BGP04217 495 aa13.78□□□□□ -0.2
PDGFD-202ENST00000393158 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.78□□□□□ -0.2
PDGFD-202ENST00000393158 MEIS3Q99687 375 aa13.77□□□□□ -0.2
PDGFD-202ENST00000393158 USP44Q9H0E7 712 aa13.77□□□□□ -0.2
PDGFD-202ENST00000393158 PALLDQ8WX93 1383 aa13.77□□□□□ -0.2
PDGFD-202ENST00000393158 PTCD1O75127 700 aaKnown RBP13.77□□□□□ -0.21
PDGFD-202ENST00000393158 DNAJC10Q8IXB1 793 aa13.77□□□□□ -0.21
PDGFD-202ENST00000393158 UTYO14607 1347 aa13.77□□□□□ -0.21
PDGFD-202ENST00000393158 NEFLP07196 543 aa13.77□□□□□ -0.21
PDGFD-202ENST00000393158 PI4KAP2A4QPH2 592 aa13.76□□□□□ -0.21
PDGFD-202ENST00000393158 PI4KAP1Q8N8J0 262 aa13.76□□□□□ -0.21
PDGFD-202ENST00000393158 MEX3CQ5U5Q3 659 aaKnown RBP13.76□□□□□ -0.21
PDGFD-202ENST00000393158 ERBB4Q15303 1308 aa13.75□□□□□ -0.21
PDGFD-202ENST00000393158 IPO8O15397 1037 aaKnown RBP13.75□□□□□ -0.21
PDGFD-202ENST00000393158 CASP7P55210 303 aa13.75□□□□□ -0.21
PDGFD-202ENST00000393158 API5Q9BZZ5 524 aaKnown RBP13.75□□□□□ -0.21
PDGFD-202ENST00000393158 CCDC9Q9Y3X0 531 aaKnown RBP13.75□□□□□ -0.21
PDGFD-202ENST00000393158 TTLL7Q6ZT98 887 aa13.75□□□□□ -0.21
PDGFD-202ENST00000393158 DDX19BQ9UMR2 479 aa13.74□□□□□ -0.21
PDGFD-202ENST00000393158 TAF1P21675 1872 aa13.74□□□□□ -0.21
PDGFD-202ENST00000393158 ITPRIPQ8IWB1 547 aa13.74□□□□□ -0.21
PDGFD-202ENST00000393158 PROM2Q8N271 834 aa13.74□□□□□ -0.21
PDGFD-202ENST00000393158 LINC00116Q8NCU8 138 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms