RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 KDM6AO15550 1401 aaPredicted RBP17.61■□□□□ 0.41
MKS1-203ENST00000393120 MX1P20591 662 aa17.6■□□□□ 0.41
MKS1-203ENST00000393120 DDIT3P35638 169 aa17.6■□□□□ 0.41
MKS1-203ENST00000393120 ZNF790Q6PG37 636 aa17.6■□□□□ 0.41
MKS1-203ENST00000393120 PPP1R42Q7Z4L9 355 aa17.6■□□□□ 0.41
MKS1-203ENST00000393120 DDX21Q9NR30 783 aaKnown RBP eCLIP17.6■□□□□ 0.41
MKS1-203ENST00000393120 MEGF6O75095 1541 aa17.6■□□□□ 0.41
MKS1-203ENST00000393120 REC8O95072 547 aa17.6■□□□□ 0.41
MKS1-203ENST00000393120 NBPF7P0C2Y1 421 aaPredicted RBP17.6■□□□□ 0.41
MKS1-203ENST00000393120 MTX1Q13505 466 aa17.6■□□□□ 0.41
MKS1-203ENST00000393120 BRINP3Q76B58 766 aa17.6■□□□□ 0.41
MKS1-203ENST00000393120 CABLES1Q8TDN4 633 aa17.6■□□□□ 0.41
MKS1-203ENST00000393120 DCAF5Q96JK2 942 aa17.6■□□□□ 0.41
MKS1-203ENST00000393120 CSB-PGBD3P0DP91 1061 aa17.59■□□□□ 0.41
MKS1-203ENST00000393120 GSE1Q14687 1217 aa17.59■□□□□ 0.41
MKS1-203ENST00000393120 RABEP1Q15276 862 aa17.59■□□□□ 0.41
MKS1-203ENST00000393120 ANXA1P04083 346 aa17.59■□□□□ 0.41
MKS1-203ENST00000393120 HSP90AB1P08238 724 aaKnown RBP17.59■□□□□ 0.41
MKS1-203ENST00000393120 ERC2O15083 957 aa17.58■□□□□ 0.4
MKS1-203ENST00000393120 DDX58O95786 925 aaKnown RBP17.58■□□□□ 0.4
MKS1-203ENST00000393120 PDIA6Q15084 440 aa17.58■□□□□ 0.4
MKS1-203ENST00000393120 PROSER3Q2NL68 480 aa17.58■□□□□ 0.4
MKS1-203ENST00000393120 HSP90AB4PQ58FF6 505 aa17.58■□□□□ 0.4
MKS1-203ENST00000393120 CIZ1Q9ULV3 898 aaPredicted RBP17.58■□□□□ 0.4
MKS1-203ENST00000393120 MAP3K2Q9Y2U5 619 aa17.58■□□□□ 0.4
MKS1-203ENST00000393120 MRC1P22897 1456 aa17.58■□□□□ 0.4
MKS1-203ENST00000393120 SCN11AQ9UI33 1791 aa17.57■□□□□ 0.4
MKS1-203ENST00000393120 BCL11AQ9H165 835 aa17.57■□□□□ 0.4
MKS1-203ENST00000393120 K7ELQ4 463 aaPredicted RBP17.57■□□□□ 0.4
MKS1-203ENST00000393120 UTYO14607 1347 aa17.57■□□□□ 0.4
MKS1-203ENST00000393120 SRGAP3O43295 1099 aa17.57■□□□□ 0.4
MKS1-203ENST00000393120 SOS2Q07890 1332 aaPredicted RBP17.57■□□□□ 0.4
MKS1-203ENST00000393120 CHRNA2Q15822 529 aa17.57■□□□□ 0.4
MKS1-203ENST00000393120 XIRP1Q702N8 1843 aaKnown RBP17.57■□□□□ 0.4
MKS1-203ENST00000393120 LINS1Q8NG48 757 aa17.57■□□□□ 0.4
MKS1-203ENST00000393120 PRAMEF22A3QJZ6 481 aa17.56■□□□□ 0.4
MKS1-203ENST00000393120 SURF6O75683 361 aaKnown RBP17.56■□□□□ 0.4
MKS1-203ENST00000393120 NFATC2IPQ8NCF5 419 aa17.56■□□□□ 0.4
MKS1-203ENST00000393120 SPRYD3Q8NCJ5 442 aa17.56■□□□□ 0.4
MKS1-203ENST00000393120 RHPN1Q8TCX5 695 aa17.56■□□□□ 0.4
MKS1-203ENST00000393120 KIF1BPQ96EK5 621 aa17.56■□□□□ 0.4
MKS1-203ENST00000393120 CYP27B1O15528 508 aa17.55■□□□□ 0.4
MKS1-203ENST00000393120 PKD1L3Q7Z443 1732 aa17.55■□□□□ 0.4
MKS1-203ENST00000393120 SLAIN2Q9P270 581 aa17.55■□□□□ 0.4
MKS1-203ENST00000393120 CD2BP2O95400 341 aaKnown RBP17.54■□□□□ 0.4
MKS1-203ENST00000393120 C9orf78Q9NZ63 289 aaPredicted RBP17.54■□□□□ 0.4
MKS1-203ENST00000393120 SLC39A6Q13433 755 aa17.53■□□□□ 0.4
MKS1-203ENST00000393120 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
MKS1-203ENST00000393120 EPB41L2O43491 1005 aaKnown RBP17.53■□□□□ 0.4
MKS1-203ENST00000393120 SNRPA1P09661 255 aaKnown RBP17.53■□□□□ 0.4
MKS1-203ENST00000393120 STRCQ7RTU9 1775 aa17.52■□□□□ 0.4
MKS1-203ENST00000393120 TUBGCP6Q96RT7 1819 aa17.52■□□□□ 0.4
MKS1-203ENST00000393120 CHMLP26374 656 aa17.52■□□□□ 0.4
MKS1-203ENST00000393120 LARP1Q6PKG0 1096 aaKnown RBP17.52■□□□□ 0.4
MKS1-203ENST00000393120 ZNF496Q96IT1 587 aaPredicted RBP17.52■□□□□ 0.4
MKS1-203ENST00000393120 ESYT1Q9BSJ8 1104 aa17.52■□□□□ 0.4
MKS1-203ENST00000393120 WDR17Q8IZU2 1322 aa17.51■□□□□ 0.39
MKS1-203ENST00000393120 USP42Q9H9J4 1324 aaKnown RBP17.51■□□□□ 0.39
MKS1-203ENST00000393120 GRM8O00222 908 aa17.51■□□□□ 0.39
MKS1-203ENST00000393120 MCM4P33991 863 aa17.51■□□□□ 0.39
MKS1-203ENST00000393120 TSHZ3Q63HK5 1081 aa17.51■□□□□ 0.39
MKS1-203ENST00000393120 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
MKS1-203ENST00000393120 IL1RAPL2Q9NP60 686 aa17.51■□□□□ 0.39
MKS1-203ENST00000393120 KDM4FA0A1W2PPD8 638 aa17.5■□□□□ 0.39
MKS1-203ENST00000393120 TTC5Q8N0Z6 440 aa17.5■□□□□ 0.39
MKS1-203ENST00000393120 IL17RAQ96F46 866 aa17.5■□□□□ 0.39
MKS1-203ENST00000393120 CWF19L2Q2TBE0 894 aaKnown RBP17.49■□□□□ 0.39
MKS1-203ENST00000393120 LRP10Q7Z4F1 713 aa17.49■□□□□ 0.39
MKS1-203ENST00000393120 ERC1Q8IUD2 1116 aa17.49■□□□□ 0.39
MKS1-203ENST00000393120 PI4K2BQ8TCG2 481 aa17.49■□□□□ 0.39
MKS1-203ENST00000393120 PRDM11Q9NQV5 511 aa17.49■□□□□ 0.39
MKS1-203ENST00000393120 TRIM6-TRIM34B2RNG4 842 aa17.49■□□□□ 0.39
MKS1-203ENST00000393120 CABP4P57796 275 aa17.49■□□□□ 0.39
MKS1-203ENST00000393120 IL27Q8NEV9 243 aa17.49■□□□□ 0.39
MKS1-203ENST00000393120 TTC41PQ6P2S7 1318 aa17.48■□□□□ 0.39
MKS1-203ENST00000393120 RIC3Q7Z5B4 369 aa17.48■□□□□ 0.39
MKS1-203ENST00000393120 NUTM1Q86Y26 1132 aa17.48■□□□□ 0.39
MKS1-203ENST00000393120 RILPL2Q969X0 211 aa17.48■□□□□ 0.39
MKS1-203ENST00000393120 METTL22Q9BUU2 404 aaPredicted RBP17.48■□□□□ 0.39
MKS1-203ENST00000393120 PARP4Q9UKK3 1724 aaKnown RBP17.48■□□□□ 0.39
MKS1-203ENST00000393120 ST18O60284 1047 aa17.47■□□□□ 0.39
MKS1-203ENST00000393120 IGKV5-2P06315 115 aa17.47■□□□□ 0.39
MKS1-203ENST00000393120 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
MKS1-203ENST00000393120 ANAPC15P60006 121 aa17.47■□□□□ 0.39
MKS1-203ENST00000393120 NEXNQ0ZGT2 675 aa17.47■□□□□ 0.39
MKS1-203ENST00000393120 RAB3GAP1Q15042 981 aa17.47■□□□□ 0.39
MKS1-203ENST00000393120 NKX1-1Q15270 411 aaPredicted RBP17.47■□□□□ 0.39
MKS1-203ENST00000393120 XAGE3Q8WTP9 111 aa17.47■□□□□ 0.39
MKS1-203ENST00000393120 PCDH11XQ9BZA7 1347 aa17.47■□□□□ 0.39
MKS1-203ENST00000393120 PCDH11YQ9BZA8 1340 aa17.47■□□□□ 0.39
MKS1-203ENST00000393120 ZNF335Q9H4Z2 1342 aaPredicted RBP17.47■□□□□ 0.39
MKS1-203ENST00000393120 C5P01031 1676 aa17.47■□□□□ 0.39
MKS1-203ENST00000393120 AIMP1Q12904 312 aaKnown RBP17.47■□□□□ 0.39
MKS1-203ENST00000393120 COPS6Q7L5N1 327 aa17.47■□□□□ 0.39
MKS1-203ENST00000393120 ZCRB1Q8TBF4 217 aaKnown RBP17.47■□□□□ 0.39
MKS1-203ENST00000393120 KAZALD1Q96I82 304 aa17.47■□□□□ 0.39
MKS1-203ENST00000393120 USP16Q9Y5T5 823 aa17.47■□□□□ 0.39
MKS1-203ENST00000393120 COL5A2P05997 1499 aaPredicted RBP17.46■□□□□ 0.39
MKS1-203ENST00000393120 ERVV-2B6SEH9 535 aa17.46■□□□□ 0.39
MKS1-203ENST00000393120 UNC5CLQ8IV45 518 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms