RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 AACSQ86V21 672 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 RPAP2Q8IXW5 612 aaPredicted RBP4.61□□□□□ -1.67
UBR3-202ENST00000392632 CKAP2LQ8IYA6 745 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 GABPB2Q8TAK5 448 aaPredicted RBP4.61□□□□□ -1.67
UBR3-202ENST00000392632 CEP63Q96MT8 703 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 ALS2CR12Q96Q35 445 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 SH2D4AQ9H788 454 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.61□□□□□ -1.679e-7■■■□□ 15
UBR3-202ENST00000392632 IFI16Q16666 785 aaKnown RBP4.61□□□□□ -1.67
UBR3-202ENST00000392632 MAP9Q49MG5 647 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 FAM114A1Q8IWE2 563 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 BBXQ8WY36 941 aaPredicted RBP4.61□□□□□ -1.67
UBR3-202ENST00000392632 NAA15Q9BXJ9 866 aaKnown RBP4.61□□□□□ -1.67
UBR3-202ENST00000392632 GTPBP4Q9BZE4 634 aaKnown RBP4.61□□□□□ -1.67
UBR3-202ENST00000392632 UBA5Q9GZZ9 404 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 SAMM50Q9Y512 469 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 IKBKGQ9Y6K9 419 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 HFM1A2PYH4 1435 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 MINDY4BA8MYZ0 360 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 RIOK3O14730 519 aaKnown RBP4.61□□□□□ -1.67
UBR3-202ENST00000392632 SRGAP3O43295 1099 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 GLRX3O76003 335 aaKnown RBP4.61□□□□□ -1.67
UBR3-202ENST00000392632 PLCG2P16885 1265 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 SNX16P57768 344 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 SYCP3Q8IZU3 236 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 PLCD3Q8N3E9 789 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 TNMDQ9H2S6 317 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 TMOD4Q9NZQ9 345 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 ZBED9Q6R2W3 1325 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 C11orf95C9JLR9 678 aaPredicted RBP4.61□□□□□ -1.67
UBR3-202ENST00000392632 RAB11FIP3O75154 756 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 C6orf163Q5TEZ5 329 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 PLCD4Q9BRC7 762 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 ZMYND15Q9H091 742 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 SIL1Q9H173 461 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 GPHNQ9NQX3 736 aaPredicted RBP4.61□□□□□ -1.67
UBR3-202ENST00000392632 CLIP2Q9UDT6 1046 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 GNAT3A8MTJ3 354 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 TBCAO75347 108 aaKnown RBP4.6□□□□□ -1.67
UBR3-202ENST00000392632 BMP15O95972 392 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 UQCRFS1P1P0C7P4 283 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 LMAN1P49257 510 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 NFKBIBQ15653 356 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 LUZP1Q86V48 1076 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 ZNF354CQ86Y25 554 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 TCP11L2Q8N4U5 519 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 KIF1BPQ96EK5 621 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 CENPHQ9H3R5 247 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 SYNCQ9H7C4 482 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 PRKRIP1Q9H875 184 aaPredicted RBP4.6□□□□□ -1.67
UBR3-202ENST00000392632 ANKRD30BQ9BXX2 1392 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 RANBP6O60518 1105 aaKnown RBP4.6□□□□□ -1.67
UBR3-202ENST00000392632 PTCD1O75127 700 aaKnown RBP4.6□□□□□ -1.67
UBR3-202ENST00000392632 KDM4AO75164 1064 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 ARID4AP29374 1257 aaPredicted RBP4.6□□□□□ -1.67
UBR3-202ENST00000392632 PRPHP41219 470 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 SLC8A3P57103 927 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 MVPQ14764 893 aaKnown RBP4.6□□□□□ -1.67
UBR3-202ENST00000392632 KANK4Q5T7N3 995 aaPredicted RBP4.6□□□□□ -1.67
UBR3-202ENST00000392632 CEP135Q66GS9 1140 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 FILIP1Q7Z7B0 1213 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 CTNNBL1Q8WYA6 563 aaPredicted RBP4.6□□□□□ -1.67
UBR3-202ENST00000392632 BICD1Q96G01 975 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 IVNS1ABPQ9Y6Y0 642 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 MACROD2A1Z1Q3 448 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 PHACTR2O75167 634 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 PDE3AQ14432 1141 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 FMNL3Q8IVF7 1028 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 FAM43AQ8N2R8 423 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 CRNKL1Q9BZJ0 848 aaKnown RBP4.6□□□□□ -1.67
UBR3-202ENST00000392632 TSPY26PQ9H489 355 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 SPC25Q9HBM1 224 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 STK32BQ9NY57 414 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 PHF8Q9UPP1 1060 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 FIBPO43427 364 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 CNGA1P29973 690 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 MRE11P49959 708 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 NLRP5P59047 1200 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 KIF22Q14807 665 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 CCDC152Q4G0S7 254 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 NBPF6Q5VWK0 638 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 TMEM132EQ6IEE7 984 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 NBPF5PQ86XG9 351 aaPredicted RBP4.6□□□□□ -1.67
UBR3-202ENST00000392632 NBPF4Q96M43 638 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 CRACR2AQ9BSW2 395 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 UPF3BQ9BZI7 483 aaKnown RBP4.6□□□□□ -1.67
UBR3-202ENST00000392632 NYXQ9GZU5 481 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.6□□□□□ -1.67
UBR3-202ENST00000392632 PARP3Q9Y6F1 533 aa4.6□□□□□ -1.67
UBR3-202ENST00000392632 GOLIM4O00461 696 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 FCHSD2O94868 740 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 KRT13P13646 458 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 HACE1Q8IYU2 909 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 NLRP3Q96P20 1036 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 TCHPQ9BT92 498 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 ZC3H12CQ9C0D7 883 aaKnown RBP4.59□□□□□ -1.67
UBR3-202ENST00000392632 C6orf50Q9HD87 102 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 HYPKQ9NX55 129 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 SLC5A4Q9NY91 659 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 CEP83Q9Y592 693 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms