RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 SYCE3A1L190 88 aa13.21□□□□□ -0.3
BRF1-204ENST00000392557 CCT4P50991 539 aaKnown RBP13.2□□□□□ -0.3
BRF1-204ENST00000392557 ANO2Q9NQ90 1003 aa13.2□□□□□ -0.3
BRF1-204ENST00000392557 KIF24Q5T7B8 1368 aa13.2□□□□□ -0.3
BRF1-204ENST00000392557 DDIT3P35638 169 aa13.2□□□□□ -0.3
BRF1-204ENST00000392557 RPAP2Q8IXW5 612 aaPredicted RBP13.2□□□□□ -0.3
BRF1-204ENST00000392557 RTL1A6NKG5 1358 aa13.2□□□□□ -0.3
BRF1-204ENST00000392557 HMMRO75330 724 aa13.19□□□□□ -0.3
BRF1-204ENST00000392557 PRIM1P49642 420 aaKnown RBP13.19□□□□□ -0.3
BRF1-204ENST00000392557 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
BRF1-204ENST00000392557 DCTPP1Q9H773 170 aa13.19□□□□□ -0.3
BRF1-204ENST00000392557 CHPF2Q9P2E5 772 aa13.19□□□□□ -0.3
BRF1-204ENST00000392557 GNAI2P04899 355 aa13.19□□□□□ -0.3
BRF1-204ENST00000392557 PDE4CQ08493 712 aa13.19□□□□□ -0.3
BRF1-204ENST00000392557 USP26Q9BXU7 913 aa13.19□□□□□ -0.3
BRF1-204ENST00000392557 RGS12O14924 1447 aa13.19□□□□□ -0.3
BRF1-204ENST00000392557 LTN1O94822 1766 aa13.19□□□□□ -0.3
BRF1-204ENST00000392557 LRRFIP2Q9Y608 721 aaKnown RBP13.18□□□□□ -0.3
BRF1-204ENST00000392557 ZNF142P52746 1687 aaPredicted RBP13.18□□□□□ -0.3
BRF1-204ENST00000392557 C1orf167Q5SNV9 1468 aa13.18□□□□□ -0.3
BRF1-204ENST00000392557 AKAP4Q5JQC9 854 aa13.17□□□□□ -0.3
BRF1-204ENST00000392557 RBSNQ9H1K0 784 aa13.17□□□□□ -0.3
BRF1-204ENST00000392557 ERC2O15083 957 aa13.17□□□□□ -0.3
BRF1-204ENST00000392557 PDIA4P13667 645 aaKnown RBP13.17□□□□□ -0.3
BRF1-204ENST00000392557 MCCP23508 829 aa13.17□□□□□ -0.3
BRF1-204ENST00000392557 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
BRF1-204ENST00000392557 PRAMEF22A3QJZ6 481 aa13.17□□□□□ -0.3
BRF1-204ENST00000392557 SLC39A6Q13433 755 aa13.17□□□□□ -0.3
BRF1-204ENST00000392557 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.17□□□□□ -0.3
BRF1-204ENST00000392557 ZMYND15Q9H091 742 aa13.17□□□□□ -0.3
BRF1-204ENST00000392557 TPM2P07951 284 aa13.16□□□□□ -0.3
BRF1-204ENST00000392557 GDPD2Q9HCC8 539 aa13.16□□□□□ -0.3
BRF1-204ENST00000392557 UBTFL1P0CB47 393 aaPredicted RBP13.16□□□□□ -0.3
BRF1-204ENST00000392557 EIF4A1P60842 406 aaKnown RBP13.16□□□□□ -0.3
BRF1-204ENST00000392557 UPF3BQ9BZI7 483 aaKnown RBP13.16□□□□□ -0.3
BRF1-204ENST00000392557 AK9Q5TCS8 1911 aa13.16□□□□□ -0.3
BRF1-204ENST00000392557 NWD1Q149M9 1564 aa13.16□□□□□ -0.3
BRF1-204ENST00000392557 PI4KAP2A4QPH2 592 aa13.16□□□□□ -0.3
BRF1-204ENST00000392557 RNMTO43148 476 aaKnown RBP13.16□□□□□ -0.3
BRF1-204ENST00000392557 AMOTQ4VCS5 1084 aa13.16□□□□□ -0.3
BRF1-204ENST00000392557 PI4KAP1Q8N8J0 262 aa13.16□□□□□ -0.3
BRF1-204ENST00000392557 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
BRF1-204ENST00000392557 CADPS2Q86UW7 1296 aa13.15□□□□□ -0.3
BRF1-204ENST00000392557 LMBRD1Q9NUN5 540 aa13.15□□□□□ -0.3
BRF1-204ENST00000392557 PNMA6EA0A0J9YXQ4 647 aa13.15□□□□□ -0.3
BRF1-204ENST00000392557 MAP4K4O95819 1239 aaPredicted RBP13.15□□□□□ -0.3
BRF1-204ENST00000392557 GNAI3P08754 354 aa13.15□□□□□ -0.3
BRF1-204ENST00000392557 NCOA3Q9Y6Q9 1424 aa13.15□□□□□ -0.3
BRF1-204ENST00000392557 NFAT5O94916 1531 aa13.15□□□□□ -0.3
BRF1-204ENST00000392557 MARF1Q9Y4F3 1742 aaKnown RBP13.14□□□□□ -0.31
BRF1-204ENST00000392557 ATP10DQ9P241 1426 aa13.14□□□□□ -0.31
BRF1-204ENST00000392557 SRCIN1Q9C0H9 1055 aa13.14□□□□□ -0.31
BRF1-204ENST00000392557 IL1RAPL2Q9NP60 686 aa13.14□□□□□ -0.31
BRF1-204ENST00000392557 RGPD2P0DJD1 1756 aa13.13□□□□□ -0.31
BRF1-204ENST00000392557 ERBB3P21860 1342 aa13.13□□□□□ -0.31
BRF1-204ENST00000392557 TATP17735 454 aaPredicted RBP13.13□□□□□ -0.31
BRF1-204ENST00000392557 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
BRF1-204ENST00000392557 LARP6Q9BRS8 491 aaKnown RBP13.13□□□□□ -0.31
BRF1-204ENST00000392557 TAOK2Q9UL54 1235 aa13.13□□□□□ -0.31
BRF1-204ENST00000392557 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
BRF1-204ENST00000392557 MYL6BP14649 208 aa13.12□□□□□ -0.31
BRF1-204ENST00000392557 PXDNQ92626 1479 aa13.12□□□□□ -0.31
BRF1-204ENST00000392557 PROSER3Q2NL68 480 aa13.12□□□□□ -0.31
BRF1-204ENST00000392557 GPT2Q8TD30 523 aa13.12□□□□□ -0.31
BRF1-204ENST00000392557 TMX3Q96JJ7 454 aa13.12□□□□□ -0.31
BRF1-204ENST00000392557 CCDC9Q9Y3X0 531 aaKnown RBP13.12□□□□□ -0.31
BRF1-204ENST00000392557 NFATC2IPQ8NCF5 419 aa13.12□□□□□ -0.31
BRF1-204ENST00000392557 USP44Q9H0E7 712 aa13.12□□□□□ -0.31
BRF1-204ENST00000392557 OS9Q13438 667 aaPredicted RBP13.11□□□□□ -0.31
BRF1-204ENST00000392557 PPP1R9BQ96SB3 815 aa13.11□□□□□ -0.31
BRF1-204ENST00000392557 UQCRHLA0A096LP55 91 aa13.11□□□□□ -0.31
BRF1-204ENST00000392557 SURF6O75683 361 aaKnown RBP13.11□□□□□ -0.31
BRF1-204ENST00000392557 UQCRHP07919 91 aa13.11□□□□□ -0.31
BRF1-204ENST00000392557 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
BRF1-204ENST00000392557 DNAAF4Q8WXU2 420 aa13.11□□□□□ -0.31
BRF1-204ENST00000392557 PRDM11Q9NQV5 511 aa13.11□□□□□ -0.31
BRF1-204ENST00000392557 TMEM63CQ9P1W3 806 aa13.11□□□□□ -0.31
BRF1-204ENST00000392557 NSFL1CQ9UNZ2 370 aaKnown RBP13.11□□□□□ -0.31
BRF1-204ENST00000392557 C9orf78Q9NZ63 289 aaPredicted RBP13.11□□□□□ -0.31
BRF1-204ENST00000392557 CEMIPQ8WUJ3 1361 aa13.11□□□□□ -0.31
BRF1-204ENST00000392557 SYAP1Q96A49 352 aaPredicted RBP13.1□□□□□ -0.31
BRF1-204ENST00000392557 LRRCC1Q9C099 1032 aa13.1□□□□□ -0.31
BRF1-204ENST00000392557 SRGAP3O43295 1099 aa13.1□□□□□ -0.31
BRF1-204ENST00000392557 OFD1O75665 1012 aa13.1□□□□□ -0.31
BRF1-204ENST00000392557 PDE1AP54750 535 aa13.1□□□□□ -0.31
BRF1-204ENST00000392557 ZNF445P59923 1031 aa13.1□□□□□ -0.31
BRF1-204ENST00000392557 STRN4Q9NRL3 753 aa13.1□□□□□ -0.31
BRF1-204ENST00000392557 PPP1R42Q7Z4L9 355 aa13.1□□□□□ -0.31
BRF1-204ENST00000392557 BABAM1Q9NWV8 329 aa13.1□□□□□ -0.31
BRF1-204ENST00000392557 MAP3K2Q9Y2U5 619 aa13.1□□□□□ -0.31
BRF1-204ENST00000392557 CWF19L2Q2TBE0 894 aaKnown RBP13.09□□□□□ -0.31
BRF1-204ENST00000392557 DDX54Q8TDD1 881 aaKnown RBP13.09□□□□□ -0.31
BRF1-204ENST00000392557 DBF4Q9UBU7 674 aaPredicted RBP13.09□□□□□ -0.31
BRF1-204ENST00000392557 MST1RQ04912 1400 aa13.09□□□□□ -0.31
BRF1-204ENST00000392557 ZNF335Q9H4Z2 1342 aaPredicted RBP13.09□□□□□ -0.31
BRF1-204ENST00000392557 TOM1L2Q6ZVM7 507 aa13.09□□□□□ -0.31
BRF1-204ENST00000392557 NUTM1Q86Y26 1132 aa13.09□□□□□ -0.31
BRF1-204ENST00000392557 A0A0U1RQG5 324 aaPredicted RBP13.09□□□□□ -0.31
BRF1-204ENST00000392557 MBD3O95983 291 aa13.09□□□□□ -0.31
BRF1-204ENST00000392557 LRSAM1Q6UWE0 723 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms