RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 TOM1O60784 492 aa15.52■□□□□ 0.08
ERCC2-204ENST00000391945 ZNF496Q96IT1 587 aaPredicted RBP15.52■□□□□ 0.08
ERCC2-204ENST00000391945 PA2G4Q9UQ80 394 aaKnown RBP15.52■□□□□ 0.08
ERCC2-204ENST00000391945 OTUD7AQ8TE49 926 aaPredicted RBP15.52■□□□□ 0.07
ERCC2-204ENST00000391945 BRPF3Q9ULD4 1205 aa15.52■□□□□ 0.07
ERCC2-204ENST00000391945 IL27Q8NEV9 243 aa15.51■□□□□ 0.07
ERCC2-204ENST00000391945 C8orf37Q96NL8 207 aa15.51■□□□□ 0.07
ERCC2-204ENST00000391945 ATP8B2P98198 1209 aa15.5■□□□□ 0.07
ERCC2-204ENST00000391945 VPS37DQ86XT2 251 aa15.5■□□□□ 0.07
ERCC2-204ENST00000391945 GRM8O00222 908 aa15.5■□□□□ 0.07
ERCC2-204ENST00000391945 RAB11FIP3O75154 756 aa15.5■□□□□ 0.07
ERCC2-204ENST00000391945 RHPN1Q8TCX5 695 aa15.5■□□□□ 0.07
ERCC2-204ENST00000391945 CEP126Q9P2H0 1117 aa15.5■□□□□ 0.07
ERCC2-204ENST00000391945 DLC1Q96QB1 1528 aa15.5■□□□□ 0.07
ERCC2-204ENST00000391945 PTMAP06454 111 aaKnown RBP15.5■□□□□ 0.07
ERCC2-204ENST00000391945 ANKARQ7Z5J8 1434 aa15.49■□□□□ 0.07
ERCC2-204ENST00000391945 SDSP20132 328 aa15.49■□□□□ 0.07
ERCC2-204ENST00000391945 FKBP4Q02790 459 aaKnown RBP eCLIP15.49■□□□□ 0.07
ERCC2-204ENST00000391945 RABEP1Q15276 862 aa15.49■□□□□ 0.07
ERCC2-204ENST00000391945 TTC22Q5TAA0 569 aa15.49■□□□□ 0.07
ERCC2-204ENST00000391945 SLC52A2Q9HAB3 445 aa15.49■□□□□ 0.07
ERCC2-204ENST00000391945 DDX21Q9NR30 783 aaKnown RBP eCLIP15.49■□□□□ 0.07
ERCC2-204ENST00000391945 ADGRL3Q9HAR2 1447 aa15.49■□□□□ 0.07
ERCC2-204ENST00000391945 RNF20Q5VTR2 975 aa15.49■□□□□ 0.07
ERCC2-204ENST00000391945 LINS1Q8NG48 757 aa15.49■□□□□ 0.07
ERCC2-204ENST00000391945 UPF3BQ9BZI7 483 aaKnown RBP15.49■□□□□ 0.07
ERCC2-204ENST00000391945 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.49■□□□□ 0.07
ERCC2-204ENST00000391945 NEURL4Q96JN8 1562 aa15.49■□□□□ 0.07
ERCC2-204ENST00000391945 NBPF7P0C2Y1 421 aaPredicted RBP15.49■□□□□ 0.07
ERCC2-204ENST00000391945 DDX49Q9Y6V7 483 aaKnown RBP15.49■□□□□ 0.07
ERCC2-204ENST00000391945 ERBB3P21860 1342 aa15.48■□□□□ 0.07
ERCC2-204ENST00000391945 TBC1D2Q9BYX2 928 aa15.48■□□□□ 0.07
ERCC2-204ENST00000391945 GLRX3O76003 335 aaKnown RBP15.48■□□□□ 0.07
ERCC2-204ENST00000391945 PDE1AP54750 535 aa15.48■□□□□ 0.07
ERCC2-204ENST00000391945 NAP1L5Q96NT1 182 aaPredicted RBP15.48■□□□□ 0.07
ERCC2-204ENST00000391945 BRINP3Q76B58 766 aa15.48■□□□□ 0.07
ERCC2-204ENST00000391945 PNMA6EA0A0J9YXQ4 647 aa15.47■□□□□ 0.07
ERCC2-204ENST00000391945 PRAMEF22A3QJZ6 481 aa15.47■□□□□ 0.07
ERCC2-204ENST00000391945 SIGLEC1Q9BZZ2 1709 aa15.47■□□□□ 0.07
ERCC2-204ENST00000391945 ABCC4O15439 1325 aa15.47■□□□□ 0.07
ERCC2-204ENST00000391945 DDX11L8A8MPP1 907 aa15.47■□□□□ 0.07
ERCC2-204ENST00000391945 DDB1Q16531 1140 aa15.47■□□□□ 0.07
ERCC2-204ENST00000391945 TBC1D32Q96NH3 1257 aa15.47■□□□□ 0.07
ERCC2-204ENST00000391945 TRMT112Q9UI30 125 aaKnown RBP15.47■□□□□ 0.07
ERCC2-204ENST00000391945 USP16Q9Y5T5 823 aa15.47■□□□□ 0.07
ERCC2-204ENST00000391945 A1BGP04217 495 aa15.46■□□□□ 0.07
ERCC2-204ENST00000391945 PHKG2P15735 406 aa15.46■□□□□ 0.07
ERCC2-204ENST00000391945 LRRFIP1Q32MZ4 808 aaKnown RBP15.46■□□□□ 0.07
ERCC2-204ENST00000391945 MYO3AQ8NEV4 1616 aa15.46■□□□□ 0.07
ERCC2-204ENST00000391945 GIGYF1O75420 1035 aaPredicted RBP15.46■□□□□ 0.07
ERCC2-204ENST00000391945 PLEKHM2Q8IWE5 1019 aa15.46■□□□□ 0.07
ERCC2-204ENST00000391945 BABAM1Q9NWV8 329 aa15.46■□□□□ 0.07
ERCC2-204ENST00000391945 CWC25Q9NXE8 425 aaPredicted RBP15.46■□□□□ 0.07
ERCC2-204ENST00000391945 MED14O60244 1454 aa15.46■□□□□ 0.07
ERCC2-204ENST00000391945 PCDH11XQ9BZA7 1347 aa15.46■□□□□ 0.07
ERCC2-204ENST00000391945 PCDH11YQ9BZA8 1340 aa15.46■□□□□ 0.07
ERCC2-204ENST00000391945 MPHOSPH8Q99549 860 aa15.46■□□□□ 0.07
ERCC2-204ENST00000391945 ALDH1L1O75891 902 aa15.45■□□□□ 0.06
ERCC2-204ENST00000391945 GNL2Q13823 731 aaKnown RBP15.45■□□□□ 0.06
ERCC2-204ENST00000391945 CCDC158Q5M9N0 1113 aa15.45■□□□□ 0.06
ERCC2-204ENST00000391945 TTC39AQ5SRH9 613 aa15.45■□□□□ 0.06
ERCC2-204ENST00000391945 ISY1Q9ULR0 285 aaKnown RBP15.45■□□□□ 0.06
ERCC2-204ENST00000391945 ZRSR1Q15695 479 aaKnown RBP15.45■□□□□ 0.06
ERCC2-204ENST00000391945 LMBR1LQ6UX01 489 aa15.45■□□□□ 0.06
ERCC2-204ENST00000391945 PTCH1Q13635 1447 aa15.45■□□□□ 0.06
ERCC2-204ENST00000391945 LRRC7Q96NW7 1537 aa15.45■□□□□ 0.06
ERCC2-204ENST00000391945 K7ELQ4 463 aaPredicted RBP15.45■□□□□ 0.06
ERCC2-204ENST00000391945 TECPR2O15040 1411 aa15.45■□□□□ 0.06
ERCC2-204ENST00000391945 TBC1D2BQ9UPU7 963 aa15.44■□□□□ 0.06
ERCC2-204ENST00000391945 PROSER3Q2NL68 480 aa15.44■□□□□ 0.06
ERCC2-204ENST00000391945 MYO5BQ9ULV0 1848 aa15.44■□□□□ 0.06
ERCC2-204ENST00000391945 VPS37CA5D8V6 355 aaPredicted RBP15.44■□□□□ 0.06
ERCC2-204ENST00000391945 KLHDC4Q8TBB5 520 aa15.44■□□□□ 0.06
ERCC2-204ENST00000391945 ECHDC1Q9NTX5 307 aa15.44■□□□□ 0.06
ERCC2-204ENST00000391945 G3V3G9 751 aa15.43■□□□□ 0.06
ERCC2-204ENST00000391945 DCAF8Q5TAQ9 597 aa15.43■□□□□ 0.06
ERCC2-204ENST00000391945 TMX4Q9H1E5 349 aaPredicted RBP15.43■□□□□ 0.06
ERCC2-204ENST00000391945 ARHGEF28Q8N1W1 1705 aaKnown RBP15.43■□□□□ 0.06
ERCC2-204ENST00000391945 CD163L1Q9NR16 1453 aa15.43■□□□□ 0.06
ERCC2-204ENST00000391945 FOSBP53539 338 aa15.43■□□□□ 0.06
ERCC2-204ENST00000391945 METTL24Q5JXM2 366 aa15.43■□□□□ 0.06
ERCC2-204ENST00000391945 TRAK2O60296 914 aa15.43■□□□□ 0.06
ERCC2-204ENST00000391945 HOXB7P09629 217 aa15.43■□□□□ 0.06
ERCC2-204ENST00000391945 USP44Q9H0E7 712 aa15.43■□□□□ 0.06
ERCC2-204ENST00000391945 SMC3Q9UQE7 1217 aa15.43■□□□□ 0.06
ERCC2-204ENST00000391945 IFIT5Q13325 482 aaKnown RBP15.43■□□□□ 0.06
ERCC2-204ENST00000391945 FAM184AQ8NB25 1140 aa15.43■□□□□ 0.06
ERCC2-204ENST00000391945 MCTP1Q6DN14 999 aa15.42■□□□□ 0.06
ERCC2-204ENST00000391945 TEX13AQ9BXU3 409 aaPredicted RBP15.42■□□□□ 0.06
ERCC2-204ENST00000391945 BICC1Q9H694 974 aaKnown RBP15.42■□□□□ 0.06
ERCC2-204ENST00000391945 CDC42BPGQ6DT37 1551 aa15.41■□□□□ 0.06
ERCC2-204ENST00000391945 RTL1A6NKG5 1358 aa15.41■□□□□ 0.06
ERCC2-204ENST00000391945 HIP1O00291 1037 aa15.41■□□□□ 0.06
ERCC2-204ENST00000391945 RIMS1Q86UR5 1692 aaKnown RBP15.41■□□□□ 0.06
ERCC2-204ENST00000391945 USP31Q70CQ4 1352 aa15.41■□□□□ 0.06
ERCC2-204ENST00000391945 H3BQV1 296 aa15.41■□□□□ 0.06
ERCC2-204ENST00000391945 IFFO2Q5TF58 517 aa15.41■□□□□ 0.06
ERCC2-204ENST00000391945 LARP6Q9BRS8 491 aaKnown RBP15.41■□□□□ 0.06
ERCC2-204ENST00000391945 SOS1Q07889 1333 aaPredicted RBP15.41■□□□□ 0.06
ERCC2-204ENST00000391945 ATP6V1AP38606 617 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms