RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 PCDHGC4Q9Y5F7 938 aa3.6□□□□□ -1.83
RNU6-440P-201ENST00000390882 MSX1P28360 303 aa3.59□□□□□ -1.83
RNU6-440P-201ENST00000390882 SEPT12Q8IYM1 358 aa3.59□□□□□ -1.83
RNU6-440P-201ENST00000390882 HELBQ8NG08 1087 aaPredicted RBP3.59□□□□□ -1.83
RNU6-440P-201ENST00000390882 ADAM32Q8TC27 787 aa3.59□□□□□ -1.83
RNU6-440P-201ENST00000390882 PCMTD1Q96MG8 357 aaPredicted RBP3.59□□□□□ -1.83
RNU6-440P-201ENST00000390882 FKBPLQ9UIM3 349 aa3.59□□□□□ -1.83
RNU6-440P-201ENST00000390882 GPSM3Q9Y4H4 160 aa3.59□□□□□ -1.83
RNU6-440P-201ENST00000390882 NUTM2BA6NNL0 878 aaPredicted RBP3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 NUTM2EB1AL46 878 aaPredicted RBP3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 M0R082 166 aa3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 PCBP4P57723 403 aaKnown RBP3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 SH3D19Q5HYK7 790 aa3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 ZNF468Q5VIY5 522 aaPredicted RBP3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 NUTM2DQ5VT03 806 aaPredicted RBP3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 MYSM1Q5VVJ2 828 aa3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 NUTM2AQ8IVF1 878 aaPredicted RBP3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 ZNF417Q8TAU3 575 aa3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 ZNF587Q96SQ5 575 aaPredicted RBP3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 OCSTAMPQ9BR26 566 aa3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 ZCCHC2Q9C0B9 1178 aaKnown RBP3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 CRISPLD1Q9H336 500 aa3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 POLR3EQ9NVU0 708 aa3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 PRR12Q9ULL5 1215 aa3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 ATP1B4Q9UN42 357 aaPredicted RBP3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 ZC3H4Q9UPT8 1303 aaKnown RBP3.58□□□□□ -1.84
RNU6-440P-201ENST00000390882 KIAA1324LA8MWY0 1029 aaPredicted RBP3.57□□□□□ -1.84
RNU6-440P-201ENST00000390882 TUSC1Q2TAM9 212 aa3.57□□□□□ -1.84
RNU6-440P-201ENST00000390882 TRAPPC3LQ5T215 181 aa3.57□□□□□ -1.84
RNU6-440P-201ENST00000390882 DZIP3Q86Y13 1208 aaKnown RBP3.57□□□□□ -1.84
RNU6-440P-201ENST00000390882 GTF3C3Q9Y5Q9 886 aa3.57□□□□□ -1.84
RNU6-440P-201ENST00000390882 ATXN7O15265 892 aaPredicted RBP3.56□□□□□ -1.84
RNU6-440P-201ENST00000390882 MED26O95402 600 aa3.56□□□□□ -1.84
RNU6-440P-201ENST00000390882 NID1P14543 1247 aa3.56□□□□□ -1.84
RNU6-440P-201ENST00000390882 CSPP1Q1MSJ5 1256 aa3.56□□□□□ -1.84
RNU6-440P-201ENST00000390882 PRR23CQ6ZRP0 262 aa3.56□□□□□ -1.84
RNU6-440P-201ENST00000390882 CYP2U1Q7Z449 544 aa3.56□□□□□ -1.84
RNU6-440P-201ENST00000390882 PROCA1Q8NCQ7 364 aaPredicted RBP3.56□□□□□ -1.84
RNU6-440P-201ENST00000390882 USP21Q9UK80 565 aa3.56□□□□□ -1.84
RNU6-440P-201ENST00000390882 MAPTP10636 758 aaKnown RBP3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 FSTP19883 344 aa3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 CD33P20138 364 aa3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 GTF2E1P29083 439 aaPredicted RBP3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 CLK2P49760 499 aaKnown RBP3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 CENPCQ03188 943 aa3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 TNP2Q05952 138 aa3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 GNASQ5JWF2 1037 aa3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 CC2D2BQ6DHV5 1058 aa3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 SHISA2Q6UWI4 295 aa3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 SPOCD1Q6ZMY3 1216 aa3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 NLRP8Q86W28 1048 aa3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 CCDC125Q86Z20 511 aa3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 MICALL1Q8N3F8 863 aa3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 ZSCAN10Q96SZ4 725 aaPredicted RBP3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 MDFIQ99750 246 aa3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 DNAAF2Q9NVR5 837 aaKnown RBP3.55□□□□□ -1.84
RNU6-440P-201ENST00000390882 A0A0A0MRY4 1105 aa3.54□□□□□ -1.84
RNU6-440P-201ENST00000390882 ERVK-9P63128 1117 aa3.54□□□□□ -1.84
RNU6-440P-201ENST00000390882 C8orf86Q6ZUL3 223 aa3.54□□□□□ -1.84
RNU6-440P-201ENST00000390882 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.54□□□□□ -1.84
RNU6-440P-201ENST00000390882 ARHGEF10LQ9HCE6 1279 aa3.54□□□□□ -1.84
RNU6-440P-201ENST00000390882 LIMD1Q9UGP4 676 aa3.54□□□□□ -1.84
RNU6-440P-201ENST00000390882 ADGRE2Q9UHX3 823 aa3.54□□□□□ -1.84
RNU6-440P-201ENST00000390882 ADARB2-AS1A8MUL3 147 aa3.53□□□□□ -1.84
RNU6-440P-201ENST00000390882 LILRB3O75022 631 aa3.53□□□□□ -1.84
RNU6-440P-201ENST00000390882 RAC1P63000 192 aa3.53□□□□□ -1.84
RNU6-440P-201ENST00000390882 C4orf17Q53FE4 359 aa3.53□□□□□ -1.84
RNU6-440P-201ENST00000390882 TMEM214Q6NUQ4 689 aaKnown RBP3.53□□□□□ -1.84
RNU6-440P-201ENST00000390882 CNKSR1Q969H4 720 aa3.53□□□□□ -1.84
RNU6-440P-201ENST00000390882 ESYT1Q9BSJ8 1104 aa3.53□□□□□ -1.84
RNU6-440P-201ENST00000390882 HCN2Q9UL51 889 aa3.53□□□□□ -1.84
RNU6-440P-201ENST00000390882 STARD13Q9Y3M8 1113 aa3.53□□□□□ -1.84
RNU6-440P-201ENST00000390882 DCDC2BA2VCK2 349 aa3.52□□□□□ -1.85
RNU6-440P-201ENST00000390882 DBX1A6NMT0 343 aa3.52□□□□□ -1.85
RNU6-440P-201ENST00000390882 KHNYNO15037 678 aaKnown RBP3.52□□□□□ -1.85
RNU6-440P-201ENST00000390882 ADAMTS4O75173 837 aa3.52□□□□□ -1.85
RNU6-440P-201ENST00000390882 WNT11O96014 354 aa3.52□□□□□ -1.85
RNU6-440P-201ENST00000390882 ALBP02768 609 aa3.52□□□□□ -1.85
RNU6-440P-201ENST00000390882 QPCTQ16769 361 aa3.52□□□□□ -1.85
RNU6-440P-201ENST00000390882 TMEM259Q4ZIN3 620 aa3.52□□□□□ -1.85
RNU6-440P-201ENST00000390882 SYT9Q86SS6 491 aa3.52□□□□□ -1.85
RNU6-440P-201ENST00000390882 WFDC12Q8WWY7 111 aa3.52□□□□□ -1.85
RNU6-440P-201ENST00000390882 ASIC4Q96FT7 647 aa3.52□□□□□ -1.85
RNU6-440P-201ENST00000390882 PRRG2O14669 202 aa3.51□□□□□ -1.85
RNU6-440P-201ENST00000390882 SIN3BO75182 1162 aa3.51□□□□□ -1.85
RNU6-440P-201ENST00000390882 RFC5P40937 340 aa3.51□□□□□ -1.85
RNU6-440P-201ENST00000390882 RTL5Q5HYW3 569 aaPredicted RBP3.51□□□□□ -1.85
RNU6-440P-201ENST00000390882 INTS5Q6P9B9 1019 aaKnown RBP3.51□□□□□ -1.85
RNU6-440P-201ENST00000390882 MARK1Q9P0L2 795 aa3.51□□□□□ -1.85
RNU6-440P-201ENST00000390882 NCANO14594 1321 aa3.5□□□□□ -1.85
RNU6-440P-201ENST00000390882 PTCD1O75127 700 aaKnown RBP3.5□□□□□ -1.85
RNU6-440P-201ENST00000390882 GNRH1P01148 92 aa3.5□□□□□ -1.85
RNU6-440P-201ENST00000390882 IREB2P48200 963 aaKnown RBP3.5□□□□□ -1.85
RNU6-440P-201ENST00000390882 FLIIQ13045 1269 aa3.5□□□□□ -1.85
RNU6-440P-201ENST00000390882 FBXO31Q5XUX0 539 aaPredicted RBP3.5□□□□□ -1.85
RNU6-440P-201ENST00000390882 C20orf204Q6ZNR8 217 aa3.5□□□□□ -1.85
RNU6-440P-201ENST00000390882 ERICH6Q7L0X2 663 aa3.5□□□□□ -1.85
RNU6-440P-201ENST00000390882 BANK1Q8NDB2 785 aa3.5□□□□□ -1.85
RNU6-440P-201ENST00000390882 C1orf216Q8TAB5 229 aa3.5□□□□□ -1.85
RNU6-440P-201ENST00000390882 KRTAP9-3Q9BYQ3 159 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms