RNA–Protein interactions for RNA: ENST00000390624.3

IGHV3-48-201, Transcript of immunoglobulin heavy variable 3-48, humanhuman

APPRIS P1 BASIC

Gene IGHV3-48, Length 432 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-48-201ENST00000390624 RIPK4P57078 832 aa18.69■□□□□ 0.58
IGHV3-48-201ENST00000390624 NLGN2Q8NFZ4 835 aa18.69■□□□□ 0.58
IGHV3-48-201ENST00000390624 USP42Q9H9J4 1324 aaKnown RBP18.69■□□□□ 0.58
IGHV3-48-201ENST00000390624 ZPR1O75312 459 aa18.68■□□□□ 0.58
IGHV3-48-201ENST00000390624 CANXP27824 592 aaKnown RBP18.68■□□□□ 0.58
IGHV3-48-201ENST00000390624 PNISRQ8TF01 805 aaKnown RBP18.68■□□□□ 0.58
IGHV3-48-201ENST00000390624 SRP68Q9UHB9 627 aaKnown RBP18.68■□□□□ 0.58
IGHV3-48-201ENST00000390624 ADAMTS8Q9UP79 889 aa18.68■□□□□ 0.58
IGHV3-48-201ENST00000390624 UTRNP46939 3433 aa18.68■□□□□ 0.58
IGHV3-48-201ENST00000390624 SNRPA1P09661 255 aaKnown RBP18.67■□□□□ 0.58
IGHV3-48-201ENST00000390624 TMPOP42166 694 aaKnown RBP18.67■□□□□ 0.58
IGHV3-48-201ENST00000390624 CCDC146Q8IYE0 955 aa18.67■□□□□ 0.58
IGHV3-48-201ENST00000390624 RUNDC1Q96C34 613 aa18.67■□□□□ 0.58
IGHV3-48-201ENST00000390624 MIS18AQ9NYP9 233 aa18.67■□□□□ 0.58
IGHV3-48-201ENST00000390624 GOLGB1Q14789 3259 aaKnown RBP18.66■□□□□ 0.58
IGHV3-48-201ENST00000390624 YY1P25490 414 aa18.66■□□□□ 0.58
IGHV3-48-201ENST00000390624 EIF5P55010 431 aaKnown RBP18.66■□□□□ 0.58
IGHV3-48-201ENST00000390624 GPR162Q16538 588 aa18.66■□□□□ 0.58
IGHV3-48-201ENST00000390624 NARFQ9UHQ1 456 aa18.66■□□□□ 0.58
IGHV3-48-201ENST00000390624 PARP3Q9Y6F1 533 aa18.66■□□□□ 0.58
IGHV3-48-201ENST00000390624 COL15A1P39059 1388 aa18.66■□□□□ 0.58
IGHV3-48-201ENST00000390624 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
IGHV3-48-201ENST00000390624 FKBP8Q14318 412 aa18.65■□□□□ 0.58
IGHV3-48-201ENST00000390624 THUMPD2Q9BTF0 503 aaKnown RBP18.65■□□□□ 0.58
IGHV3-48-201ENST00000390624 USP16Q9Y5T5 823 aa18.65■□□□□ 0.58
IGHV3-48-201ENST00000390624 A0A087WZG4 1122 aa18.64■□□□□ 0.57
IGHV3-48-201ENST00000390624 A1BGP04217 495 aa18.64■□□□□ 0.57
IGHV3-48-201ENST00000390624 IL6STP40189 918 aaPredicted RBP18.64■□□□□ 0.57
IGHV3-48-201ENST00000390624 USPL1Q5W0Q7 1092 aa18.64■□□□□ 0.57
IGHV3-48-201ENST00000390624 NPM2Q86SE8 214 aaKnown RBP18.63■□□□□ 0.57
IGHV3-48-201ENST00000390624 PRAMEF22A3QJZ6 481 aa18.62■□□□□ 0.57
IGHV3-48-201ENST00000390624 ANP32CO43423 234 aa18.62■□□□□ 0.57
IGHV3-48-201ENST00000390624 TM4SF1P30408 202 aa18.62■□□□□ 0.57
IGHV3-48-201ENST00000390624 NEUROD2Q15784 382 aa18.62■□□□□ 0.57
IGHV3-48-201ENST00000390624 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
IGHV3-48-201ENST00000390624 RRP7AQ9Y3A4 280 aaKnown RBP18.62■□□□□ 0.57
IGHV3-48-201ENST00000390624 ZNF330Q9Y3S2 320 aaPredicted RBP18.61■□□□□ 0.57
IGHV3-48-201ENST00000390624 EIF4A1P60842 406 aaKnown RBP18.6■□□□□ 0.57
IGHV3-48-201ENST00000390624 BABAM1Q9NWV8 329 aa18.6■□□□□ 0.57
IGHV3-48-201ENST00000390624 KDM3BQ7LBC6 1761 aa18.6■□□□□ 0.57
IGHV3-48-201ENST00000390624 GIGYF1O75420 1035 aaPredicted RBP18.59■□□□□ 0.57
IGHV3-48-201ENST00000390624 TGFB2P61812 414 aa18.59■□□□□ 0.57
IGHV3-48-201ENST00000390624 BCL2L12Q9HB09 334 aa18.59■□□□□ 0.57
IGHV3-48-201ENST00000390624 TSPYL4Q9UJ04 414 aa18.59■□□□□ 0.57
IGHV3-48-201ENST00000390624 GRIN3BO60391 1043 aa18.58■□□□□ 0.56
IGHV3-48-201ENST00000390624 DDR1Q08345 913 aa18.58■□□□□ 0.56
IGHV3-48-201ENST00000390624 TRIM35Q9UPQ4 493 aa18.58■□□□□ 0.56
IGHV3-48-201ENST00000390624 TBC1D2BQ9UPU7 963 aa18.58■□□□□ 0.56
IGHV3-48-201ENST00000390624 KIF13BQ9NQT8 1826 aa18.58■□□□□ 0.56
IGHV3-48-201ENST00000390624 POLRMTO00411 1230 aaKnown RBP18.57■□□□□ 0.56
IGHV3-48-201ENST00000390624 YBX3P16989 372 aaKnown RBP eCLIP18.57■□□□□ 0.56
IGHV3-48-201ENST00000390624 NFIXQ14938 502 aa18.57■□□□□ 0.56
IGHV3-48-201ENST00000390624 CCDC184Q52MB2 194 aa18.57■□□□□ 0.56
IGHV3-48-201ENST00000390624 PIP4K2AP48426 406 aaPredicted RBP18.56■□□□□ 0.56
IGHV3-48-201ENST00000390624 C10orf71Q711Q0 1435 aa18.56■□□□□ 0.56
IGHV3-48-201ENST00000390624 CHD4Q14839 1912 aa18.55■□□□□ 0.56
IGHV3-48-201ENST00000390624 APAF1O14727 1248 aa18.55■□□□□ 0.56
IGHV3-48-201ENST00000390624 DZIP3Q86Y13 1208 aaKnown RBP18.55■□□□□ 0.56
IGHV3-48-201ENST00000390624 A0A0G2JLW4 131 aa18.54■□□□□ 0.56
IGHV3-48-201ENST00000390624 NBPF26B4DH59 902 aa18.54■□□□□ 0.56
IGHV3-48-201ENST00000390624 NBPF10Q6P3W6 841 aaKnown RBP18.54■□□□□ 0.56
IGHV3-48-201ENST00000390624 NBPF15Q8N660 670 aa18.54■□□□□ 0.56
IGHV3-48-201ENST00000390624 CHL1O00533 1208 aa18.53■□□□□ 0.56
IGHV3-48-201ENST00000390624 CAMTA2O94983 1202 aa18.53■□□□□ 0.56
IGHV3-48-201ENST00000390624 SERPINB2P05120 415 aa18.53■□□□□ 0.56
IGHV3-48-201ENST00000390624 TBC1D9BQ66K14 1250 aa18.53■□□□□ 0.56
IGHV3-48-201ENST00000390624 BICDL1Q6ZP65 573 aa18.53■□□□□ 0.56
IGHV3-48-201ENST00000390624 LAMB4A4D0S4 1761 aa18.53■□□□□ 0.56
IGHV3-48-201ENST00000390624 CLEC4GQ6UXB4 293 aa18.52■□□□□ 0.56
IGHV3-48-201ENST00000390624 MRS2Q9HD23 443 aa18.52■□□□□ 0.56
IGHV3-48-201ENST00000390624 LAS1LQ9Y4W2 734 aaKnown RBP18.52■□□□□ 0.56
IGHV3-48-201ENST00000390624 N4BP2Q86UW6 1770 aaPredicted RBP18.52■□□□□ 0.55
IGHV3-48-201ENST00000390624 PXDNLA1KZ92 1463 aa18.52■□□□□ 0.55
IGHV3-48-201ENST00000390624 AFDNP55196 1824 aaKnown RBP18.51■□□□□ 0.55
IGHV3-48-201ENST00000390624 DPEP1P16444 411 aa18.51■□□□□ 0.55
IGHV3-48-201ENST00000390624 SETDB2Q96T68 719 aa18.51■□□□□ 0.55
IGHV3-48-201ENST00000390624 WWC3Q9ULE0 1092 aa18.51■□□□□ 0.55
IGHV3-48-201ENST00000390624 ZNF652Q9Y2D9 606 aa18.51■□□□□ 0.55
IGHV3-48-201ENST00000390624 SCN7AQ01118 1682 aa18.5■□□□□ 0.55
IGHV3-48-201ENST00000390624 KIAA1551Q9HCM1 1747 aa18.5■□□□□ 0.55
IGHV3-48-201ENST00000390624 NRXN2Q9P2S2 1712 aa18.49■□□□□ 0.55
IGHV3-48-201ENST00000390624 RGL2O15211 777 aa18.49■□□□□ 0.55
IGHV3-48-201ENST00000390624 KCNA3P22001 575 aa18.49■□□□□ 0.55
IGHV3-48-201ENST00000390624 CALD1Q05682 793 aaKnown RBP18.49■□□□□ 0.55
IGHV3-48-201ENST00000390624 CFAP44Q96MT7 982 aa18.49■□□□□ 0.55
IGHV3-48-201ENST00000390624 ERBB4Q15303 1308 aa18.49■□□□□ 0.55
IGHV3-48-201ENST00000390624 CARMIL3Q8ND23 1372 aa18.48■□□□□ 0.55
IGHV3-48-201ENST00000390624 NGEFQ8N5V2 710 aa18.48■□□□□ 0.55
IGHV3-48-201ENST00000390624 PIM2Q9P1W9 311 aa18.48■□□□□ 0.55
IGHV3-48-201ENST00000390624 BCORQ6W2J9 1755 aa18.47■□□□□ 0.55
IGHV3-48-201ENST00000390624 MYL6BP14649 208 aa18.47■□□□□ 0.55
IGHV3-48-201ENST00000390624 EIF2S2P20042 333 aaKnown RBP18.47■□□□□ 0.55
IGHV3-48-201ENST00000390624 BCS1LQ9Y276 419 aa18.47■□□□□ 0.55
IGHV3-48-201ENST00000390624 ERVV-1B6SEH8 477 aa18.45■□□□□ 0.54
IGHV3-48-201ENST00000390624 ZNF853P0CG23 659 aa18.45■□□□□ 0.54
IGHV3-48-201ENST00000390624 CHRNA5P30532 468 aa18.45■□□□□ 0.54
IGHV3-48-201ENST00000390624 GNAI1P63096 354 aa18.45■□□□□ 0.54
IGHV3-48-201ENST00000390624 BRCA1P38398 1863 aaKnown RBP18.44■□□□□ 0.54
IGHV3-48-201ENST00000390624 NPHP1O15259 732 aa18.44■□□□□ 0.54
IGHV3-48-201ENST00000390624 HLFQ16534 295 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms