RNA–Protein interactions for RNA: ENST00000390519.1

TRAJ18-201, Transcript of T cell receptor alpha joining 18, humanhuman

APPRIS P1 BASIC

Gene TRAJ18, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ18-201ENST00000390519 CCDC87Q9NVE4 849 aa4.86□□□□□ -1.63
TRAJ18-201ENST00000390519 FANCIQ9NVI1 1328 aa4.86□□□□□ -1.63
TRAJ18-201ENST00000390519 ZPR1O75312 459 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 VAMP4O75379 141 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 CYP19A1P11511 503 aaPredicted RBP4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 RFC4P35249 363 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 SLC39A6Q13433 755 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 AAMPQ13685 434 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 SLC15A2Q16348 729 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 KIF6Q6ZMV9 814 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 NLGN1Q8N2Q7 840 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 TFCP2L1Q9NZI6 479 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 PDZRN3Q9UPQ7 1066 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 SALL2Q9Y467 1007 aaPredicted RBP4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 PTPRCP08575 1304 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 KIF16BQ96L93 1317 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 IBTKQ9P2D0 1353 aaPredicted RBP4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 KDM3BQ7LBC6 1761 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 UBR2Q8IWV8 1755 aa4.85□□□□□ -1.63
TRAJ18-201ENST00000390519 RNF123Q5XPI4 1314 aa4.84□□□□□ -1.63
TRAJ18-201ENST00000390519 EIF2S2P20042 333 aaKnown RBP4.84□□□□□ -1.63
TRAJ18-201ENST00000390519 CRKLP46109 303 aaKnown RBP4.84□□□□□ -1.63
TRAJ18-201ENST00000390519 EIF5P55010 431 aaKnown RBP4.84□□□□□ -1.63
TRAJ18-201ENST00000390519 EN1Q05925 392 aaPredicted RBP4.84□□□□□ -1.63
TRAJ18-201ENST00000390519 NEXNQ0ZGT2 675 aa4.84□□□□□ -1.63
TRAJ18-201ENST00000390519 FAM182BQ5T319 152 aa4.84□□□□□ -1.63
TRAJ18-201ENST00000390519 ANKRD13DQ6ZTN6 518 aa4.84□□□□□ -1.63
TRAJ18-201ENST00000390519 THUMPD2Q9BTF0 503 aaKnown RBP4.84□□□□□ -1.63
TRAJ18-201ENST00000390519 API5Q9BZZ5 524 aaKnown RBP4.84□□□□□ -1.63
TRAJ18-201ENST00000390519 NARFQ9UHQ1 456 aa4.84□□□□□ -1.63
TRAJ18-201ENST00000390519 USP16Q9Y5T5 823 aa4.84□□□□□ -1.63
TRAJ18-201ENST00000390519 TAF1LQ8IZX4 1826 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 TOGARAM1Q9Y4F4 1720 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 C5P01031 1676 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 PAPPAQ13219 1627 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 GNPATO15228 680 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 SLC4A2P04920 1241 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 EXOSC9Q06265 439 aaKnown RBP4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 TRIM28Q13263 835 aaKnown RBP4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 EZH2Q15910 746 aaKnown RBP4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 PARP10Q53GL7 1025 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 KSR2Q6VAB6 950 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 DNAJC10Q8IXB1 793 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 PROM2Q8N271 834 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 PLBD2Q8NHP8 589 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 AKT1S1Q96B36 256 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 NYXQ9GZU5 481 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 MIS18AQ9NYP9 233 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 QSER1Q2KHR3 1735 aa4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 TNS1Q9HBL0 1735 aaKnown RBP4.83□□□□□ -1.64
TRAJ18-201ENST00000390519 KCPQ6ZWJ8 1503 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 MYH14Q7Z406 1995 aaKnown RBP4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 KCNQ3O43525 872 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 POLD1P28340 1107 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 CCT4P50991 539 aaKnown RBP4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 ITPK1Q13572 414 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 PDE3AQ14432 1141 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 ZKSCAN2Q63HK3 967 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 INTS5Q6P9B9 1019 aaKnown RBP4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 TPTE2Q6XPS3 522 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 GIGYF2Q6Y7W6 1299 aaKnown RBP4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 ILDR2Q71H61 639 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 PPP1R42Q7Z4L9 355 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 RIC3Q7Z5B4 369 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 C8orf58Q8NAV2 365 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 TSR2Q969E8 191 aaKnown RBP4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 SETDB2Q96T68 719 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 LRRC4BQ9NT99 713 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 RCAN3Q9UKA8 241 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 LAMB4A4D0S4 1761 aa4.82□□□□□ -1.64
TRAJ18-201ENST00000390519 COL15A1P39059 1388 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 C4BP0C0L5 1744 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 COL5A3P25940 1745 aaPredicted RBP4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 MAP3K15Q6ZN16 1313 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 RREB1Q92766 1687 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 ELL2O00472 640 aaPredicted RBP4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 ALDH1L1O75891 902 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 A1BGP04217 495 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 CANXP27824 592 aaKnown RBP4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 RARSP54136 660 aaKnown RBP4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 FLIIQ13045 1269 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 FKBP5Q13451 457 aaPredicted RBP4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 TCIRG1Q13488 830 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 GRIPAP1Q4V328 841 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 COPS6Q7L5N1 327 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 DEFB132Q7Z7B7 95 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 DZIP3Q86Y13 1208 aaKnown RBP4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 CCDC191Q8NCU4 936 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 LINC00116Q8NCU8 138 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 ARHGEF1Q92888 912 aaKnown RBP4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 CDCA7LQ96GN5 454 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 SLC4A9Q96Q91 983 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 MTFR1LQ9H019 292 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 SMC4Q9NTJ3 1288 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 CHPF2Q9P2E5 772 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 ZBTB1Q9Y2K1 713 aa4.81□□□□□ -1.64
TRAJ18-201ENST00000390519 USP42Q9H9J4 1324 aaKnown RBP4.8□□□□□ -1.64
TRAJ18-201ENST00000390519 UBR3Q6ZT12 1888 aa4.8□□□□□ -1.64
TRAJ18-201ENST00000390519 MSH5O43196 834 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms