RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 VSIG10Q8N0Z9 540 aa14.37□□□□□ -0.11
TRAV4-201ENST00000390426 PHACTR3Q96KR7 559 aa14.37□□□□□ -0.11
TRAV4-201ENST00000390426 CHRNA5P30532 468 aa14.36□□□□□ -0.11
TRAV4-201ENST00000390426 PRKAR2BP31323 418 aa14.36□□□□□ -0.11
TRAV4-201ENST00000390426 ZNF496Q96IT1 587 aaPredicted RBP14.36□□□□□ -0.11
TRAV4-201ENST00000390426 PIM2Q9P1W9 311 aa14.36□□□□□ -0.11
TRAV4-201ENST00000390426 NARFQ9UHQ1 456 aa14.36□□□□□ -0.11
TRAV4-201ENST00000390426 ADAMTS7Q9UKP4 1686 aa14.36□□□□□ -0.11
TRAV4-201ENST00000390426 COL15A1P39059 1388 aa14.35□□□□□ -0.11
TRAV4-201ENST00000390426 STARD3NLO95772 234 aa14.35□□□□□ -0.11
TRAV4-201ENST00000390426 PPP2R1AP30153 589 aa14.35□□□□□ -0.11
TRAV4-201ENST00000390426 NFIXQ14938 502 aa14.35□□□□□ -0.11
TRAV4-201ENST00000390426 ZNF790Q6PG37 636 aa14.35□□□□□ -0.11
TRAV4-201ENST00000390426 RSPH6AQ9H0K4 717 aa14.35□□□□□ -0.11
TRAV4-201ENST00000390426 BCL2L12Q9HB09 334 aa14.35□□□□□ -0.11
TRAV4-201ENST00000390426 NUDCQ9Y266 331 aa14.35□□□□□ -0.11
TRAV4-201ENST00000390426 GOLGB1Q14789 3259 aaKnown RBP14.34□□□□□ -0.11
TRAV4-201ENST00000390426 U2AF1L5P0DN76 240 aaPredicted RBP14.34□□□□□ -0.11
TRAV4-201ENST00000390426 U2AF1Q01081 240 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRAV4-201ENST00000390426 DALRD3Q5D0E6 543 aaKnown RBP14.34□□□□□ -0.11
TRAV4-201ENST00000390426 KCNQ3O43525 872 aa14.33□□□□□ -0.12
TRAV4-201ENST00000390426 SERPINB2P05120 415 aa14.33□□□□□ -0.12
TRAV4-201ENST00000390426 BICDL1Q6ZP65 573 aa14.33□□□□□ -0.12
TRAV4-201ENST00000390426 VIRMAQ69YN4 1812 aaKnown RBP14.33□□□□□ -0.12
TRAV4-201ENST00000390426 HEG1Q9ULI3 1381 aa14.33□□□□□ -0.12
TRAV4-201ENST00000390426 KIF3CO14782 793 aa14.32□□□□□ -0.12
TRAV4-201ENST00000390426 EIF5P55010 431 aaKnown RBP14.32□□□□□ -0.12
TRAV4-201ENST00000390426 FMNL2Q96PY5 1086 aa14.32□□□□□ -0.12
TRAV4-201ENST00000390426 TEX13AQ9BXU3 409 aaPredicted RBP14.32□□□□□ -0.12
TRAV4-201ENST00000390426 ZNF330Q9Y3S2 320 aaPredicted RBP14.32□□□□□ -0.12
TRAV4-201ENST00000390426 A0A087WZG4 1122 aa14.31□□□□□ -0.12
TRAV4-201ENST00000390426 BTBD11A6QL63 1104 aa14.31□□□□□ -0.12
TRAV4-201ENST00000390426 A1BGP04217 495 aa14.31□□□□□ -0.12
TRAV4-201ENST00000390426 C9orf131Q5VYM1 1079 aa14.31□□□□□ -0.12
TRAV4-201ENST00000390426 CEMIPQ8WUJ3 1361 aa14.31□□□□□ -0.12
TRAV4-201ENST00000390426 MCM10Q7L590 875 aa14.3□□□□□ -0.12
TRAV4-201ENST00000390426 TBC1D2BQ9UPU7 963 aa14.3□□□□□ -0.12
TRAV4-201ENST00000390426 UBR2Q8IWV8 1755 aa14.29□□□□□ -0.12
TRAV4-201ENST00000390426 DCTN1Q14203 1278 aa14.29□□□□□ -0.12
TRAV4-201ENST00000390426 TBC1D9BQ66K14 1250 aa14.29□□□□□ -0.12
TRAV4-201ENST00000390426 RTF1Q92541 710 aaKnown RBP14.29□□□□□ -0.12
TRAV4-201ENST00000390426 BRCA1P38398 1863 aaKnown RBP14.29□□□□□ -0.12
TRAV4-201ENST00000390426 IL6STP40189 918 aaPredicted RBP14.28□□□□□ -0.12
TRAV4-201ENST00000390426 NMRK2Q9NPI5 230 aa14.28□□□□□ -0.12
TRAV4-201ENST00000390426 RNF181Q9P0P0 153 aa14.28□□□□□ -0.12
TRAV4-201ENST00000390426 USP16Q9Y5T5 823 aa14.28□□□□□ -0.12
TRAV4-201ENST00000390426 PRAMEF22A3QJZ6 481 aa14.27□□□□□ -0.13
TRAV4-201ENST00000390426 HSPA6P17066 643 aa14.27□□□□□ -0.13
TRAV4-201ENST00000390426 PIP4K2AP48426 406 aaPredicted RBP14.27□□□□□ -0.13
TRAV4-201ENST00000390426 NPM2Q86SE8 214 aaKnown RBP14.27□□□□□ -0.13
TRAV4-201ENST00000390426 C2CD5Q86YS7 1000 aa14.27□□□□□ -0.13
TRAV4-201ENST00000390426 CCDC24Q8N4L8 307 aa14.27□□□□□ -0.13
TRAV4-201ENST00000390426 SIPA1L3O60292 1781 aaPredicted RBP14.27□□□□□ -0.13
TRAV4-201ENST00000390426 CARMIL3Q8ND23 1372 aa14.26□□□□□ -0.13
TRAV4-201ENST00000390426 AFDNP55196 1824 aaKnown RBP14.25□□□□□ -0.13
TRAV4-201ENST00000390426 ARFGEF1Q9Y6D6 1849 aa14.25□□□□□ -0.13
TRAV4-201ENST00000390426 H0YIN7 160 aa14.25□□□□□ -0.13
TRAV4-201ENST00000390426 CAMTA2O94983 1202 aa14.25□□□□□ -0.13
TRAV4-201ENST00000390426 RASSF7Q02833 373 aa14.25□□□□□ -0.13
TRAV4-201ENST00000390426 DZIP3Q86Y13 1208 aaKnown RBP14.25□□□□□ -0.13
TRAV4-201ENST00000390426 TTLL6Q8N841 843 aa14.25□□□□□ -0.13
TRAV4-201ENST00000390426 HTATSF1O43719 755 aaKnown RBP14.24□□□□□ -0.13
TRAV4-201ENST00000390426 SNRPA1P09661 255 aaKnown RBP14.24□□□□□ -0.13
TRAV4-201ENST00000390426 PRR5LQ6MZQ0 368 aa14.24□□□□□ -0.13
TRAV4-201ENST00000390426 NRXN2Q9P2S2 1712 aa14.24□□□□□ -0.13
TRAV4-201ENST00000390426 TOMM70O94826 608 aa14.23□□□□□ -0.13
TRAV4-201ENST00000390426 ZNF622Q969S3 477 aaKnown RBP eCLIP14.23□□□□□ -0.13
TRAV4-201ENST00000390426 SETDB2Q96T68 719 aa14.23□□□□□ -0.13
TRAV4-201ENST00000390426 BRIP1Q9BX63 1249 aa14.23□□□□□ -0.13
TRAV4-201ENST00000390426 MIS18AQ9NYP9 233 aa14.23□□□□□ -0.13
TRAV4-201ENST00000390426 NPHP1O15259 732 aa14.22□□□□□ -0.13
TRAV4-201ENST00000390426 NEFMP07197 916 aa14.22□□□□□ -0.13
TRAV4-201ENST00000390426 PRELPP51888 382 aa14.22□□□□□ -0.13
TRAV4-201ENST00000390426 TAF7Q15545 349 aaPredicted RBP14.22□□□□□ -0.13
TRAV4-201ENST00000390426 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
TRAV4-201ENST00000390426 KDM2BQ8NHM5 1336 aa14.21□□□□□ -0.13
TRAV4-201ENST00000390426 PDE6BP35913 854 aa14.21□□□□□ -0.13
TRAV4-201ENST00000390426 C16orf71Q8IYS4 520 aaPredicted RBP14.21□□□□□ -0.13
TRAV4-201ENST00000390426 RRAGCQ9HB90 399 aa14.21□□□□□ -0.13
TRAV4-201ENST00000390426 NBPF26B4DH59 902 aa14.2□□□□□ -0.14
TRAV4-201ENST00000390426 LMNB1P20700 586 aa14.2□□□□□ -0.14
TRAV4-201ENST00000390426 NBPF10Q6P3W6 841 aaKnown RBP14.2□□□□□ -0.14
TRAV4-201ENST00000390426 NBPF15Q8N660 670 aa14.2□□□□□ -0.14
TRAV4-201ENST00000390426 CNBD1Q8NA66 436 aa14.2□□□□□ -0.14
TRAV4-201ENST00000390426 SCN7AQ01118 1682 aa14.2□□□□□ -0.14
TRAV4-201ENST00000390426 NFKBIEO00221 500 aa14.19□□□□□ -0.14
TRAV4-201ENST00000390426 C21orf2O43822 256 aa14.19□□□□□ -0.14
TRAV4-201ENST00000390426 PLEKHF1Q96S99 279 aa14.19□□□□□ -0.14
TRAV4-201ENST00000390426 THUMPD2Q9BTF0 503 aaKnown RBP14.19□□□□□ -0.14
TRAV4-201ENST00000390426 PDZRN3Q9UPQ7 1066 aa14.19□□□□□ -0.14
TRAV4-201ENST00000390426 ST5P78524 1137 aa14.18□□□□□ -0.14
TRAV4-201ENST00000390426 NFE2L2Q16236 605 aa14.18□□□□□ -0.14
TRAV4-201ENST00000390426 RBM46Q8TBY0 533 aaKnown RBP14.18□□□□□ -0.14
TRAV4-201ENST00000390426 ANKRD31Q8N7Z5 1873 aa14.17□□□□□ -0.14
TRAV4-201ENST00000390426 FAM177BA6PVY3 158 aa14.17□□□□□ -0.14
TRAV4-201ENST00000390426 APLP1P51693 650 aa14.17□□□□□ -0.14
TRAV4-201ENST00000390426 CLEC4GQ6UXB4 293 aa14.17□□□□□ -0.14
TRAV4-201ENST00000390426 NBPF5PQ86XG9 351 aaPredicted RBP14.17□□□□□ -0.14
TRAV4-201ENST00000390426 NGEFQ8N5V2 710 aa14.17□□□□□ -0.14
TRAV4-201ENST00000390426 PNISRQ8TF01 805 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms