RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 TEX13AQ9BXU3 409 aaPredicted RBP11.83□□□□□ -0.52
TRBV27-201ENST00000390399 SRP68Q9UHB9 627 aaKnown RBP11.83□□□□□ -0.52
TRBV27-201ENST00000390399 CD2APQ9Y5K6 639 aa11.83□□□□□ -0.52
TRBV27-201ENST00000390399 CANXP27824 592 aaKnown RBP11.82□□□□□ -0.52
TRBV27-201ENST00000390399 KDM3BQ7LBC6 1761 aa11.82□□□□□ -0.52
TRBV27-201ENST00000390399 ZPR1O75312 459 aa11.81□□□□□ -0.52
TRBV27-201ENST00000390399 TAF7Q15545 349 aaPredicted RBP11.81□□□□□ -0.52
TRBV27-201ENST00000390399 GPR162Q16538 588 aa11.81□□□□□ -0.52
TRBV27-201ENST00000390399 CCDC146Q8IYE0 955 aa11.81□□□□□ -0.52
TRBV27-201ENST00000390399 PELP1Q8IZL8 1130 aaKnown RBP11.81□□□□□ -0.52
TRBV27-201ENST00000390399 PNISRQ8TF01 805 aaKnown RBP11.81□□□□□ -0.52
TRBV27-201ENST00000390399 THUMPD2Q9BTF0 503 aaKnown RBP11.81□□□□□ -0.52
TRBV27-201ENST00000390399 RIPK4P57078 832 aa11.8□□□□□ -0.52
TRBV27-201ENST00000390399 FKBP8Q14318 412 aa11.8□□□□□ -0.52
TRBV27-201ENST00000390399 USPL1Q5W0Q7 1092 aa11.8□□□□□ -0.52
TRBV27-201ENST00000390399 PARP3Q9Y6F1 533 aa11.8□□□□□ -0.52
TRBV27-201ENST00000390399 LAMB4A4D0S4 1761 aa11.79□□□□□ -0.52
TRBV27-201ENST00000390399 KIF13BQ9NQT8 1826 aa11.79□□□□□ -0.52
TRBV27-201ENST00000390399 C10orf71Q711Q0 1435 aa11.79□□□□□ -0.52
TRBV27-201ENST00000390399 SCN7AQ01118 1682 aa11.79□□□□□ -0.52
TRBV27-201ENST00000390399 A0A087WZG4 1122 aa11.79□□□□□ -0.52
TRBV27-201ENST00000390399 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
TRBV27-201ENST00000390399 TMPOP42166 694 aaKnown RBP11.79□□□□□ -0.52
TRBV27-201ENST00000390399 EIF5P55010 431 aaKnown RBP11.79□□□□□ -0.52
TRBV27-201ENST00000390399 LMOD3Q0VAK6 560 aa11.79□□□□□ -0.52
TRBV27-201ENST00000390399 RUNDC1Q96C34 613 aa11.79□□□□□ -0.52
TRBV27-201ENST00000390399 MIS18AQ9NYP9 233 aa11.79□□□□□ -0.52
TRBV27-201ENST00000390399 NARFQ9UHQ1 456 aa11.79□□□□□ -0.52
TRBV27-201ENST00000390399 ADAMTS8Q9UP79 889 aa11.79□□□□□ -0.52
TRBV27-201ENST00000390399 ZNF330Q9Y3S2 320 aaPredicted RBP11.79□□□□□ -0.52
TRBV27-201ENST00000390399 PRAMEF22A3QJZ6 481 aa11.78□□□□□ -0.52
TRBV27-201ENST00000390399 A1BGP04217 495 aa11.78□□□□□ -0.52
TRBV27-201ENST00000390399 YY1P25490 414 aa11.78□□□□□ -0.52
TRBV27-201ENST00000390399 IL6STP40189 918 aaPredicted RBP11.78□□□□□ -0.52
TRBV27-201ENST00000390399 RRP7AQ9Y3A4 280 aaKnown RBP11.78□□□□□ -0.52
TRBV27-201ENST00000390399 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.52
TRBV27-201ENST00000390399 PXDNLA1KZ92 1463 aa11.77□□□□□ -0.52
TRBV27-201ENST00000390399 DDR1Q08345 913 aa11.77□□□□□ -0.53
TRBV27-201ENST00000390399 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
TRBV27-201ENST00000390399 NPM2Q86SE8 214 aaKnown RBP11.77□□□□□ -0.53
TRBV27-201ENST00000390399 USP16Q9Y5T5 823 aa11.77□□□□□ -0.53
TRBV27-201ENST00000390399 POLRMTO00411 1230 aaKnown RBP11.76□□□□□ -0.53
TRBV27-201ENST00000390399 YBX3P16989 372 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRBV27-201ENST00000390399 TSPYL4Q9UJ04 414 aa11.76□□□□□ -0.53
TRBV27-201ENST00000390399 BCORQ6W2J9 1755 aa11.76□□□□□ -0.53
TRBV27-201ENST00000390399 N4BP2Q86UW6 1770 aaPredicted RBP11.75□□□□□ -0.53
TRBV27-201ENST00000390399 ANP32CO43423 234 aa11.75□□□□□ -0.53
TRBV27-201ENST00000390399 TM4SF1P30408 202 aa11.75□□□□□ -0.53
TRBV27-201ENST00000390399 PIP4K2AP48426 406 aaPredicted RBP11.75□□□□□ -0.53
TRBV27-201ENST00000390399 EIF4A1P60842 406 aaKnown RBP11.75□□□□□ -0.53
TRBV27-201ENST00000390399 NFIXQ14938 502 aa11.75□□□□□ -0.53
TRBV27-201ENST00000390399 BCL2L12Q9HB09 334 aa11.75□□□□□ -0.53
TRBV27-201ENST00000390399 WWC3Q9ULE0 1092 aa11.75□□□□□ -0.53
TRBV27-201ENST00000390399 TBC1D2BQ9UPU7 963 aa11.75□□□□□ -0.53
TRBV27-201ENST00000390399 CHD4Q14839 1912 aa11.74□□□□□ -0.53
TRBV27-201ENST00000390399 GRIN3BO60391 1043 aa11.74□□□□□ -0.53
TRBV27-201ENST00000390399 TGFB2P61812 414 aa11.74□□□□□ -0.53
TRBV27-201ENST00000390399 DZIP3Q86Y13 1208 aaKnown RBP11.74□□□□□ -0.53
TRBV27-201ENST00000390399 BABAM1Q9NWV8 329 aa11.74□□□□□ -0.53
TRBV27-201ENST00000390399 NRXN2Q9P2S2 1712 aa11.74□□□□□ -0.53
TRBV27-201ENST00000390399 AFDNP55196 1824 aaKnown RBP11.74□□□□□ -0.53
TRBV27-201ENST00000390399 GIGYF1O75420 1035 aaPredicted RBP11.73□□□□□ -0.53
TRBV27-201ENST00000390399 CAMTA2O94983 1202 aa11.73□□□□□ -0.53
TRBV27-201ENST00000390399 BICDL1Q6ZP65 573 aa11.73□□□□□ -0.53
TRBV27-201ENST00000390399 TRIM35Q9UPQ4 493 aa11.73□□□□□ -0.53
TRBV27-201ENST00000390399 A0A0G2JLW4 131 aa11.72□□□□□ -0.53
TRBV27-201ENST00000390399 NBPF26B4DH59 902 aa11.72□□□□□ -0.53
TRBV27-201ENST00000390399 SERPINB2P05120 415 aa11.72□□□□□ -0.53
TRBV27-201ENST00000390399 DPEP1P16444 411 aa11.72□□□□□ -0.53
TRBV27-201ENST00000390399 CCDC184Q52MB2 194 aa11.72□□□□□ -0.53
TRBV27-201ENST00000390399 TBC1D9BQ66K14 1250 aa11.72□□□□□ -0.53
TRBV27-201ENST00000390399 NBPF10Q6P3W6 841 aaKnown RBP11.72□□□□□ -0.53
TRBV27-201ENST00000390399 NBPF15Q8N660 670 aa11.72□□□□□ -0.53
TRBV27-201ENST00000390399 GOLGB1Q14789 3259 aaKnown RBP11.72□□□□□ -0.53
TRBV27-201ENST00000390399 CARMIL3Q8ND23 1372 aa11.71□□□□□ -0.53
TRBV27-201ENST00000390399 APAF1O14727 1248 aa11.71□□□□□ -0.53
TRBV27-201ENST00000390399 MRS2Q9HD23 443 aa11.71□□□□□ -0.53
TRBV27-201ENST00000390399 LAS1LQ9Y4W2 734 aaKnown RBP11.71□□□□□ -0.53
TRBV27-201ENST00000390399 BRCA1P38398 1863 aaKnown RBP11.71□□□□□ -0.53
TRBV27-201ENST00000390399 UTRNP46939 3433 aa11.7□□□□□ -0.54
TRBV27-201ENST00000390399 BCS1LQ9Y276 419 aa11.7□□□□□ -0.54
TRBV27-201ENST00000390399 ZNF652Q9Y2D9 606 aa11.7□□□□□ -0.54
TRBV27-201ENST00000390399 ERBB4Q15303 1308 aa11.69□□□□□ -0.54
TRBV27-201ENST00000390399 CHL1O00533 1208 aa11.69□□□□□ -0.54
TRBV27-201ENST00000390399 MYL6BP14649 208 aa11.69□□□□□ -0.54
TRBV27-201ENST00000390399 CHRNA5P30532 468 aa11.69□□□□□ -0.54
TRBV27-201ENST00000390399 NGEFQ8N5V2 710 aa11.69□□□□□ -0.54
TRBV27-201ENST00000390399 SETDB2Q96T68 719 aa11.69□□□□□ -0.54
TRBV27-201ENST00000390399 NPHP1O15259 732 aa11.68□□□□□ -0.54
TRBV27-201ENST00000390399 EIF2S2P20042 333 aaKnown RBP11.68□□□□□ -0.54
TRBV27-201ENST00000390399 KCNA3P22001 575 aa11.68□□□□□ -0.54
TRBV27-201ENST00000390399 CLEC4GQ6UXB4 293 aa11.68□□□□□ -0.54
TRBV27-201ENST00000390399 PIM2Q9P1W9 311 aa11.68□□□□□ -0.54
TRBV27-201ENST00000390399 DLEC1Q9Y238 1755 aa11.68□□□□□ -0.54
TRBV27-201ENST00000390399 RGL2O15211 777 aa11.67□□□□□ -0.54
TRBV27-201ENST00000390399 CALD1Q05682 793 aaKnown RBP11.67□□□□□ -0.54
TRBV27-201ENST00000390399 PRR5LQ6MZQ0 368 aa11.67□□□□□ -0.54
TRBV27-201ENST00000390399 KIF6Q6ZMV9 814 aa11.67□□□□□ -0.54
TRBV27-201ENST00000390399 CNBD1Q8NA66 436 aa11.67□□□□□ -0.54
TRBV27-201ENST00000390399 CFAP44Q96MT7 982 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms