RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 ATP8B2P98198 1209 aa19.03■□□□□ 0.64
PTPRN2-201ENST00000389413 MCM5P33992 734 aa19.02■□□□□ 0.64
PTPRN2-201ENST00000389413 MYD88Q99836 296 aa19.02■□□□□ 0.64
PTPRN2-201ENST00000389413 LARP6Q9BRS8 491 aaKnown RBP19.02■□□□□ 0.64
PTPRN2-201ENST00000389413 YTHDC2Q9H6S0 1430 aaKnown RBP19.02■□□□□ 0.64
PTPRN2-201ENST00000389413 RRP12Q5JTH9 1297 aaKnown RBP19.02■□□□□ 0.64
PTPRN2-201ENST00000389413 USP25Q9UHP3 1055 aa19.02■□□□□ 0.63
PTPRN2-201ENST00000389413 U3KPZ7 1027 aaPredicted RBP19.01■□□□□ 0.63
PTPRN2-201ENST00000389413 UHRF1BP1LA0JNW5 1464 aa19.01■□□□□ 0.63
PTPRN2-201ENST00000389413 LRSAM1Q6UWE0 723 aa19.01■□□□□ 0.63
PTPRN2-201ENST00000389413 TRMT2AQ8IZ69 625 aaKnown RBP19.01■□□□□ 0.63
PTPRN2-201ENST00000389413 STRN4Q9NRL3 753 aa19.01■□□□□ 0.63
PTPRN2-201ENST00000389413 MAP3K2Q9Y2U5 619 aa19.01■□□□□ 0.63
PTPRN2-201ENST00000389413 SERPINC1P01008 464 aa19■□□□□ 0.63
PTPRN2-201ENST00000389413 GJB2P29033 226 aa19■□□□□ 0.63
PTPRN2-201ENST00000389413 VPS53Q5VIR6 699 aa19■□□□□ 0.63
PTPRN2-201ENST00000389413 TRIM22Q8IYM9 498 aa19■□□□□ 0.63
PTPRN2-201ENST00000389413 KRT24Q2M2I5 525 aa19■□□□□ 0.63
PTPRN2-201ENST00000389413 CDKL5O76039 1030 aa18.99■□□□□ 0.63
PTPRN2-201ENST00000389413 CEBPAP49715 358 aaPredicted RBP18.99■□□□□ 0.63
PTPRN2-201ENST00000389413 TNRQ92752 1358 aa18.99■□□□□ 0.63
PTPRN2-201ENST00000389413 FAM177BA6PVY3 158 aa18.99■□□□□ 0.63
PTPRN2-201ENST00000389413 FILIP1Q7Z7B0 1213 aa18.99■□□□□ 0.63
PTPRN2-201ENST00000389413 UBE2HP62256 183 aa18.99■□□□□ 0.63
PTPRN2-201ENST00000389413 NACAP1Q9BZK3 213 aa18.99■□□□□ 0.63
PTPRN2-201ENST00000389413 IMMTQ16891 758 aaKnown RBP18.98■□□□□ 0.63
PTPRN2-201ENST00000389413 MTHFSDQ2M296 383 aaKnown RBP18.98■□□□□ 0.63
PTPRN2-201ENST00000389413 HMGB1P09429 215 aaKnown RBP18.98■□□□□ 0.63
PTPRN2-201ENST00000389413 USP26Q9BXU7 913 aa18.98■□□□□ 0.63
PTPRN2-201ENST00000389413 PRDM11Q9NQV5 511 aa18.98■□□□□ 0.63
PTPRN2-201ENST00000389413 ZNF521Q96K83 1311 aa18.98■□□□□ 0.63
PTPRN2-201ENST00000389413 SBNO2Q9Y2G9 1366 aa18.97■□□□□ 0.63
PTPRN2-201ENST00000389413 FOXO3O43524 673 aa18.97■□□□□ 0.63
PTPRN2-201ENST00000389413 UVSSAQ2YD98 709 aa18.97■□□□□ 0.63
PTPRN2-201ENST00000389413 FILIP1LQ4L180 1135 aa18.97■□□□□ 0.63
PTPRN2-201ENST00000389413 ZSCAN22P10073 491 aaPredicted RBP18.96■□□□□ 0.63
PTPRN2-201ENST00000389413 ABCA8O94911 1581 aa18.96■□□□□ 0.63
PTPRN2-201ENST00000389413 CCDC69A6NI79 296 aa18.96■□□□□ 0.63
PTPRN2-201ENST00000389413 ANXA1P04083 346 aa18.96■□□□□ 0.63
PTPRN2-201ENST00000389413 IL13P35225 146 aa18.96■□□□□ 0.63
PTPRN2-201ENST00000389413 DDX19AQ9NUU7 478 aaKnown RBP18.96■□□□□ 0.63
PTPRN2-201ENST00000389413 KDM5AP29375 1690 aaKnown RBP18.95■□□□□ 0.62
PTPRN2-201ENST00000389413 IFIT1P09914 478 aaKnown RBP18.95■□□□□ 0.62
PTPRN2-201ENST00000389413 CBFA2T2O43439 604 aa18.95■□□□□ 0.62
PTPRN2-201ENST00000389413 CHPF2Q9P2E5 772 aa18.95■□□□□ 0.62
PTPRN2-201ENST00000389413 DACH1Q9UI36 760 aa18.95■□□□□ 0.62
PTPRN2-201ENST00000389413 AKAP2Q9Y2D5 859 aa18.95■□□□□ 0.62
PTPRN2-201ENST00000389413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.94■□□□□ 0.62
PTPRN2-201ENST00000389413 FLT4P35916 1363 aa18.94■□□□□ 0.62
PTPRN2-201ENST00000389413 ADCY5O95622 1261 aa18.94■□□□□ 0.62
PTPRN2-201ENST00000389413 CKAP2LQ8IYA6 745 aa18.94■□□□□ 0.62
PTPRN2-201ENST00000389413 ANO10Q9NW15 660 aa18.94■□□□□ 0.62
PTPRN2-201ENST00000389413 A0A087WZG4 1122 aa18.93■□□□□ 0.62
PTPRN2-201ENST00000389413 SMTNL1A8MU46 457 aa18.93■□□□□ 0.62
PTPRN2-201ENST00000389413 GNL3LQ9NVN8 582 aaKnown RBP18.93■□□□□ 0.62
PTPRN2-201ENST00000389413 TFIP11Q9UBB9 837 aaKnown RBP18.93■□□□□ 0.62
PTPRN2-201ENST00000389413 ATP10AO60312 1499 aa18.93■□□□□ 0.62
PTPRN2-201ENST00000389413 RBM33Q96EV2 1170 aaKnown RBP18.93■□□□□ 0.62
PTPRN2-201ENST00000389413 MPHOSPH8Q99549 860 aa18.93■□□□□ 0.62
PTPRN2-201ENST00000389413 ACBD3Q9H3P7 528 aa18.93■□□□□ 0.62
PTPRN2-201ENST00000389413 HMG20BQ9P0W2 317 aa18.93■□□□□ 0.62
PTPRN2-201ENST00000389413 ZMYM3Q14202 1370 aa18.93■□□□□ 0.62
PTPRN2-201ENST00000389413 ZGPATQ8N5A5 531 aaKnown RBP18.93■□□□□ 0.62
PTPRN2-201ENST00000389413 CCDC85AQ96PX6 553 aaPredicted RBP18.93■□□□□ 0.62
PTPRN2-201ENST00000389413 CTAGE5O15320 804 aa18.92■□□□□ 0.62
PTPRN2-201ENST00000389413 SMARCE1Q969G3 411 aa18.92■□□□□ 0.62
PTPRN2-201ENST00000389413 SAMD9LQ8IVG5 1584 aa18.92■□□□□ 0.62
PTPRN2-201ENST00000389413 PIP4K2AP48426 406 aaPredicted RBP18.92■□□□□ 0.62
PTPRN2-201ENST00000389413 HSP90B2PQ58FF3 399 aa18.92■□□□□ 0.62
PTPRN2-201ENST00000389413 SLC3A2P08195 630 aaKnown RBP18.92■□□□□ 0.62
PTPRN2-201ENST00000389413 TXLNAP40222 546 aa18.92■□□□□ 0.62
PTPRN2-201ENST00000389413 USP48Q86UV5 1035 aa18.92■□□□□ 0.62
PTPRN2-201ENST00000389413 IDH1O75874 414 aaKnown RBP18.91■□□□□ 0.62
PTPRN2-201ENST00000389413 ALDH1L1O75891 902 aa18.91■□□□□ 0.62
PTPRN2-201ENST00000389413 HCLS1P14317 486 aaPredicted RBP18.91■□□□□ 0.62
PTPRN2-201ENST00000389413 PTCD1O75127 700 aaKnown RBP18.91■□□□□ 0.62
PTPRN2-201ENST00000389413 PRIM1P49642 420 aaKnown RBP18.91■□□□□ 0.62
PTPRN2-201ENST00000389413 INTS4Q96HW7 963 aaKnown RBP18.91■□□□□ 0.62
PTPRN2-201ENST00000389413 RAD21O60216 631 aa18.91■□□□□ 0.62
PTPRN2-201ENST00000389413 MSH6P52701 1360 aa18.9■□□□□ 0.62
PTPRN2-201ENST00000389413 NCKAP5LQ9HCH0 1330 aa18.9■□□□□ 0.62
PTPRN2-201ENST00000389413 SYNMO15061 1565 aa18.9■□□□□ 0.62
PTPRN2-201ENST00000389413 CHMLP26374 656 aa18.9■□□□□ 0.62
PTPRN2-201ENST00000389413 EDC4Q6P2E9 1401 aaKnown RBP18.9■□□□□ 0.62
PTPRN2-201ENST00000389413 NUP133Q8WUM0 1156 aa18.9■□□□□ 0.62
PTPRN2-201ENST00000389413 PDCL2Q8N4E4 241 aa18.9■□□□□ 0.62
PTPRN2-201ENST00000389413 C8orf76Q96K31 380 aa18.9■□□□□ 0.62
PTPRN2-201ENST00000389413 NEK1Q96PY6 1258 aa18.9■□□□□ 0.62
PTPRN2-201ENST00000389413 EYA1Q99502 592 aa18.9■□□□□ 0.62
PTPRN2-201ENST00000389413 BRPF1P55201 1214 aaPredicted RBP18.89■□□□□ 0.62
PTPRN2-201ENST00000389413 METTL24Q5JXM2 366 aa18.89■□□□□ 0.62
PTPRN2-201ENST00000389413 CEP89Q96ST8 783 aa18.89■□□□□ 0.62
PTPRN2-201ENST00000389413 PDCL3Q9H2J4 239 aa18.89■□□□□ 0.62
PTPRN2-201ENST00000389413 WASF1Q92558 559 aa18.89■□□□□ 0.61
PTPRN2-201ENST00000389413 CNPY2Q9Y2B0 182 aa18.89■□□□□ 0.61
PTPRN2-201ENST00000389413 ERVK-7P63135 1459 aa18.89■□□□□ 0.61
PTPRN2-201ENST00000389413 CHL1O00533 1208 aa18.89■□□□□ 0.61
PTPRN2-201ENST00000389413 CLIP2Q9UDT6 1046 aa18.89■□□□□ 0.61
PTPRN2-201ENST00000389413 PLXNC1O60486 1568 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 TDO2P48775 406 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms