RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 SOS1Q07889 1333 aaPredicted RBP29.26■■■□□ 2.27
CNEP1R1-201ENST00000389134 RASSF7Q02833 373 aa29.26■■■□□ 2.27
CNEP1R1-201ENST00000389134 SULT6B1Q6IMI4 303 aa29.26■■■□□ 2.27
CNEP1R1-201ENST00000389134 CAPN15O75808 1086 aa29.25■■■□□ 2.27
CNEP1R1-201ENST00000389134 DNAJC10Q8IXB1 793 aa29.25■■■□□ 2.27
CNEP1R1-201ENST00000389134 TIMELESSQ9UNS1 1208 aa29.25■■■□□ 2.27
CNEP1R1-201ENST00000389134 NARFQ9UHQ1 456 aa29.24■■■□□ 2.27
CNEP1R1-201ENST00000389134 PRELPP51888 382 aa29.23■■■□□ 2.27
CNEP1R1-201ENST00000389134 NFIXQ14938 502 aa29.23■■■□□ 2.27
CNEP1R1-201ENST00000389134 AKAP4Q5JQC9 854 aa29.23■■■□□ 2.27
CNEP1R1-201ENST00000389134 TTLL6Q8N841 843 aa29.23■■■□□ 2.27
CNEP1R1-201ENST00000389134 PANK3Q9H999 370 aa29.23■■■□□ 2.27
CNEP1R1-201ENST00000389134 TIAM2Q8IVF5 1701 aa29.23■■■□□ 2.27
CNEP1R1-201ENST00000389134 SLC52A2Q9HAB3 445 aa29.22■■■□□ 2.27
CNEP1R1-201ENST00000389134 CYP19A1P11511 503 aaPredicted RBP29.21■■■□□ 2.27
CNEP1R1-201ENST00000389134 MORC1Q86VD1 984 aa29.21■■■□□ 2.27
CNEP1R1-201ENST00000389134 DICER1Q9UPY3 1922 aaKnown RBP29.21■■■□□ 2.27
CNEP1R1-201ENST00000389134 COL15A1P39059 1388 aa29.19■■■□□ 2.26
CNEP1R1-201ENST00000389134 SERPINB2P05120 415 aa29.19■■■□□ 2.26
CNEP1R1-201ENST00000389134 HSPA1AP0DMV8 641 aaKnown RBP29.17■■■□□ 2.26
CNEP1R1-201ENST00000389134 HSPA1BP0DMV9 641 aaKnown RBP29.17■■■□□ 2.26
CNEP1R1-201ENST00000389134 IL13P35225 146 aa29.17■■■□□ 2.26
CNEP1R1-201ENST00000389134 H0YIN7 160 aa29.16■■■□□ 2.26
CNEP1R1-201ENST00000389134 C2CD5Q86YS7 1000 aa29.16■■■□□ 2.26
CNEP1R1-201ENST00000389134 LGR6Q9HBX8 967 aa29.16■■■□□ 2.26
CNEP1R1-201ENST00000389134 MRC1P22897 1456 aa29.15■■■□□ 2.26
CNEP1R1-201ENST00000389134 SLC39A6Q13433 755 aa29.14■■■□□ 2.26
CNEP1R1-201ENST00000389134 DPY19L2Q6NUT2 758 aa29.14■■■□□ 2.26
CNEP1R1-201ENST00000389134 BCL2L12Q9HB09 334 aa29.14■■■□□ 2.26
CNEP1R1-201ENST00000389134 ZBTB1Q9Y2K1 713 aa29.14■■■□□ 2.26
CNEP1R1-201ENST00000389134 RNMTO43148 476 aaKnown RBP29.13■■■□□ 2.25
CNEP1R1-201ENST00000389134 VSIG10Q8N0Z9 540 aa29.13■■■□□ 2.25
CNEP1R1-201ENST00000389134 NFKBIEO00221 500 aa29.12■■■□□ 2.25
CNEP1R1-201ENST00000389134 FER1L6Q2WGJ9 1857 aa29.12■■■□□ 2.25
CNEP1R1-201ENST00000389134 ANKRD31Q8N7Z5 1873 aa29.1■■■□□ 2.25
CNEP1R1-201ENST00000389134 POTECB2RU33 542 aa29.1■■■□□ 2.25
CNEP1R1-201ENST00000389134 PDZRN3Q9UPQ7 1066 aa29.1■■■□□ 2.25
CNEP1R1-201ENST00000389134 UBR2Q8IWV8 1755 aa29.09■■■□□ 2.25
CNEP1R1-201ENST00000389134 EIF4G2P78344 907 aaKnown RBP eCLIP29.08■■■□□ 2.25
CNEP1R1-201ENST00000389134 CARMIL3Q8ND23 1372 aa29.08■■■□□ 2.25
CNEP1R1-201ENST00000389134 A0A087WZG4 1122 aa29.07■■■□□ 2.24
CNEP1R1-201ENST00000389134 KNSTRNQ9Y448 316 aa29.07■■■□□ 2.24
CNEP1R1-201ENST00000389134 STARD3NLO95772 234 aa29.06■■■□□ 2.24
CNEP1R1-201ENST00000389134 CANXP27824 592 aaKnown RBP29.06■■■□□ 2.24
CNEP1R1-201ENST00000389134 BICDL1Q6ZP65 573 aa29.06■■■□□ 2.24
CNEP1R1-201ENST00000389134 PDE6BP35913 854 aa29.05■■■□□ 2.24
CNEP1R1-201ENST00000389134 ERFEQ4G0M1 354 aa29.05■■■□□ 2.24
CNEP1R1-201ENST00000389134 ZNF622Q969S3 477 aaKnown RBP eCLIP29.05■■■□□ 2.24
CNEP1R1-201ENST00000389134 EIF5P55010 431 aaKnown RBP29.04■■■□□ 2.24
CNEP1R1-201ENST00000389134 BRIP1Q9BX63 1249 aa29.04■■■□□ 2.24
CNEP1R1-201ENST00000389134 HSPA5P11021 654 aaKnown RBP29.03■■■□□ 2.24
CNEP1R1-201ENST00000389134 CREBZFQ9NS37 354 aa29.03■■■□□ 2.24
CNEP1R1-201ENST00000389134 C21orf2O43822 256 aa29.02■■■□□ 2.24
CNEP1R1-201ENST00000389134 CACNA1SQ13698 1873 aa29.02■■■□□ 2.24
CNEP1R1-201ENST00000389134 HMOX1P09601 288 aa29.01■■■□□ 2.23
CNEP1R1-201ENST00000389134 TRIM26Q12899 539 aaPredicted RBP29.01■■■□□ 2.23
CNEP1R1-201ENST00000389134 MTHFSDQ2M296 383 aaKnown RBP29.01■■■□□ 2.23
CNEP1R1-201ENST00000389134 CHADLQ6NUI6 762 aa29.01■■■□□ 2.23
CNEP1R1-201ENST00000389134 TTC5Q8N0Z6 440 aa29.01■■■□□ 2.23
CNEP1R1-201ENST00000389134 COL11A2P13942 1736 aaPredicted RBP29■■■□□ 2.23
CNEP1R1-201ENST00000389134 TBC1D9BQ66K14 1250 aa29■■■□□ 2.23
CNEP1R1-201ENST00000389134 LTBP3Q9NS15 1303 aa28.99■■■□□ 2.23
CNEP1R1-201ENST00000389134 SCN7AQ01118 1682 aa28.99■■■□□ 2.23
CNEP1R1-201ENST00000389134 SLX4Q8IY92 1834 aa28.99■■■□□ 2.23
CNEP1R1-201ENST00000389134 CLSPNQ9HAW4 1339 aa28.98■■■□□ 2.23
CNEP1R1-201ENST00000389134 TEX13AQ9BXU3 409 aaPredicted RBP28.98■■■□□ 2.23
CNEP1R1-201ENST00000389134 TAOK3Q9H2K8 898 aa28.98■■■□□ 2.23
CNEP1R1-201ENST00000389134 ZNF219Q9P2Y4 722 aaPredicted RBP28.98■■■□□ 2.23
CNEP1R1-201ENST00000389134 PRR5LQ6MZQ0 368 aa28.97■■■□□ 2.23
CNEP1R1-201ENST00000389134 CNKSR1Q969H4 720 aa28.96■■■□□ 2.23
CNEP1R1-201ENST00000389134 MKRN1Q9UHC7 482 aaKnown RBP28.96■■■□□ 2.23
CNEP1R1-201ENST00000389134 SCN4AP35499 1836 aa28.96■■■□□ 2.23
CNEP1R1-201ENST00000389134 ARFGEF2Q9Y6D5 1785 aa28.96■■■□□ 2.23
CNEP1R1-201ENST00000389134 AMER1Q5JTC6 1135 aaPredicted RBP28.95■■■□□ 2.22
CNEP1R1-201ENST00000389134 DDNO94850 711 aaPredicted RBP28.93■■■□□ 2.22
CNEP1R1-201ENST00000389134 IL6STP40189 918 aaPredicted RBP28.93■■■□□ 2.22
CNEP1R1-201ENST00000389134 SOGA3Q5TF21 947 aa28.93■■■□□ 2.22
CNEP1R1-201ENST00000389134 TBC1D2BQ9UPU7 963 aa28.93■■■□□ 2.22
CNEP1R1-201ENST00000389134 HEG1Q9ULI3 1381 aa28.92■■■□□ 2.22
CNEP1R1-201ENST00000389134 STYK1Q6J9G0 422 aa28.92■■■□□ 2.22
CNEP1R1-201ENST00000389134 CCDC24Q8N4L8 307 aa28.92■■■□□ 2.22
CNEP1R1-201ENST00000389134 ZNF496Q96IT1 587 aaPredicted RBP28.92■■■□□ 2.22
CNEP1R1-201ENST00000389134 SETDB2Q96T68 719 aa28.92■■■□□ 2.22
CNEP1R1-201ENST00000389134 SIPA1L3O60292 1781 aaPredicted RBP28.91■■■□□ 2.22
CNEP1R1-201ENST00000389134 NPHP1O15259 732 aa28.91■■■□□ 2.22
CNEP1R1-201ENST00000389134 DIAPH1O60610 1272 aaKnown RBP28.91■■■□□ 2.22
CNEP1R1-201ENST00000389134 ZNF790Q6PG37 636 aa28.91■■■□□ 2.22
CNEP1R1-201ENST00000389134 NPM2Q86SE8 214 aaKnown RBP28.91■■■□□ 2.22
CNEP1R1-201ENST00000389134 CNBD1Q8NA66 436 aa28.91■■■□□ 2.22
CNEP1R1-201ENST00000389134 ZNF330Q9Y3S2 320 aaPredicted RBP28.91■■■□□ 2.22
CNEP1R1-201ENST00000389134 IQCA1LA6NCM1 817 aa28.9■■■□□ 2.22
CNEP1R1-201ENST00000389134 POTEIP0CG38 1075 aa28.9■■■□□ 2.22
CNEP1R1-201ENST00000389134 POTEJP0CG39 1038 aa28.9■■■□□ 2.22
CNEP1R1-201ENST00000389134 SRGNP10124 158 aa28.89■■■□□ 2.22
CNEP1R1-201ENST00000389134 ST5P78524 1137 aa28.89■■■□□ 2.22
CNEP1R1-201ENST00000389134 TEFQ10587 303 aa28.89■■■□□ 2.22
CNEP1R1-201ENST00000389134 MASTLQ96GX5 879 aa28.89■■■□□ 2.22
CNEP1R1-201ENST00000389134 CNTNAP1P78357 1384 aa28.88■■■□□ 2.21
CNEP1R1-201ENST00000389134 PRPF40BQ6NWY9 871 aaKnown RBP28.88■■■□□ 2.21
CNEP1R1-201ENST00000389134 LDHDQ86WU2 507 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms