RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 C8orf76Q96K31 380 aa18.01■□□□□ 0.47
ALK-201ENST00000389048 STAMBPO95630 424 aa18■□□□□ 0.47
ALK-201ENST00000389048 ANO10Q9NW15 660 aa18■□□□□ 0.47
ALK-201ENST00000389048 ANKIB1Q9P2G1 1089 aa18■□□□□ 0.47
ALK-201ENST00000389048 MX1P20591 662 aa18■□□□□ 0.47
ALK-201ENST00000389048 TCERG1LQ5VWI1 586 aa18■□□□□ 0.47
ALK-201ENST00000389048 PAIP2Q9BPZ3 127 aaKnown RBP18■□□□□ 0.47
ALK-201ENST00000389048 MYO1BO43795 1136 aa17.99■□□□□ 0.47
ALK-201ENST00000389048 NOP2P46087 812 aaKnown RBP17.99■□□□□ 0.47
ALK-201ENST00000389048 AFAP1Q8N556 730 aa17.99■□□□□ 0.47
ALK-201ENST00000389048 MAP9Q49MG5 647 aa17.99■□□□□ 0.47
ALK-201ENST00000389048 FSIP1Q8NA03 581 aa17.99■□□□□ 0.47
ALK-201ENST00000389048 NLRP5P59047 1200 aa17.99■□□□□ 0.47
ALK-201ENST00000389048 GCOM1H8Y6P7 765 aaPredicted RBP17.98■□□□□ 0.47
ALK-201ENST00000389048 MYZAPP0CAP1 466 aa17.98■□□□□ 0.47
ALK-201ENST00000389048 KRT32Q14532 448 aa17.98■□□□□ 0.47
ALK-201ENST00000389048 MTIF2P46199 727 aaKnown RBP17.98■□□□□ 0.47
ALK-201ENST00000389048 JARID2Q92833 1246 aaPredicted RBP17.98■□□□□ 0.47
ALK-201ENST00000389048 ADCY5O95622 1261 aa17.98■□□□□ 0.47
ALK-201ENST00000389048 CETN2P41208 172 aa17.98■□□□□ 0.47
ALK-201ENST00000389048 GBP3Q9H0R5 595 aa17.98■□□□□ 0.47
ALK-201ENST00000389048 IFIT1P09914 478 aaKnown RBP17.97■□□□□ 0.47
ALK-201ENST00000389048 APBB1IPQ7Z5R6 666 aaPredicted RBP17.97■□□□□ 0.47
ALK-201ENST00000389048 HOOK3Q86VS8 718 aa17.97■□□□□ 0.47
ALK-201ENST00000389048 RGS22Q8NE09 1264 aa17.97■□□□□ 0.47
ALK-201ENST00000389048 NAPBQ9H115 298 aa17.97■□□□□ 0.47
ALK-201ENST00000389048 JADE2Q9NQC1 790 aa17.97■□□□□ 0.47
ALK-201ENST00000389048 SLC12A7Q9Y666 1083 aa17.97■□□□□ 0.47
ALK-201ENST00000389048 TNPO1Q92973 898 aaKnown RBP17.97■□□□□ 0.47
ALK-201ENST00000389048 SSRP1Q08945 709 aaKnown RBP17.97■□□□□ 0.47
ALK-201ENST00000389048 GOLGA8BA8MQT2 603 aa17.97■□□□□ 0.47
ALK-201ENST00000389048 HAND2P61296 217 aa17.97■□□□□ 0.47
ALK-201ENST00000389048 ARHGAP5Q13017 1502 aa17.97■□□□□ 0.47
ALK-201ENST00000389048 SMARCC1Q92922 1105 aaPredicted RBP17.97■□□□□ 0.47
ALK-201ENST00000389048 WDR70Q9NW82 654 aa17.97■□□□□ 0.47
ALK-201ENST00000389048 MYOM3Q5VTT5 1437 aa17.96■□□□□ 0.47
ALK-201ENST00000389048 GJB2P29033 226 aa17.96■□□□□ 0.47
ALK-201ENST00000389048 FERMT2Q96AC1 680 aa17.96■□□□□ 0.47
ALK-201ENST00000389048 TNIP1Q15025 636 aa17.96■□□□□ 0.47
ALK-201ENST00000389048 CCDC175P0C221 793 aa17.96■□□□□ 0.47
ALK-201ENST00000389048 PRC1O43663 620 aa17.96■□□□□ 0.47
ALK-201ENST00000389048 ECM2O94769 699 aaPredicted RBP17.96■□□□□ 0.47
ALK-201ENST00000389048 DUSP27Q5VZP5 1158 aa17.96■□□□□ 0.47
ALK-201ENST00000389048 DZIP1Q86YF9 867 aaKnown RBP17.96■□□□□ 0.47
ALK-201ENST00000389048 RAB11FIP3O75154 756 aa17.95■□□□□ 0.46
ALK-201ENST00000389048 PAFAH1B1P43034 410 aa17.95■□□□□ 0.46
ALK-201ENST00000389048 PLCD3Q8N3E9 789 aa17.95■□□□□ 0.46
ALK-201ENST00000389048 FGD6Q6ZV73 1430 aa17.95■□□□□ 0.46
ALK-201ENST00000389048 GOLGA8AA7E2F4 631 aa17.95■□□□□ 0.46
ALK-201ENST00000389048 PPP4R3AQ6IN85 833 aa17.95■□□□□ 0.46
ALK-201ENST00000389048 ANKRD50Q9ULJ7 1429 aa17.95■□□□□ 0.46
ALK-201ENST00000389048 YEATS4O95619 227 aa17.95■□□□□ 0.46
ALK-201ENST00000389048 TTLL12Q14166 644 aaPredicted RBP17.95■□□□□ 0.46
ALK-201ENST00000389048 HOMER2Q9NSB8 354 aa17.95■□□□□ 0.46
ALK-201ENST00000389048 U3KPZ7 1027 aaPredicted RBP17.95■□□□□ 0.46
ALK-201ENST00000389048 RRBP1Q9P2E9 1410 aaKnown RBP17.95■□□□□ 0.46
ALK-201ENST00000389048 PAXIP1Q6ZW49 1069 aaPredicted RBP17.95■□□□□ 0.46
ALK-201ENST00000389048 WDR63Q8IWG1 891 aa17.95■□□□□ 0.46
ALK-201ENST00000389048 NBPF8Q3BBV2 869 aa17.94■□□□□ 0.46
ALK-201ENST00000389048 USO1O60763 962 aaKnown RBP17.94■□□□□ 0.46
ALK-201ENST00000389048 IDEP14735 1019 aa17.94■□□□□ 0.46
ALK-201ENST00000389048 CCDC40Q4G0X9 1142 aa17.94■□□□□ 0.46
ALK-201ENST00000389048 IFIT3O14879 490 aaKnown RBP17.93■□□□□ 0.46
ALK-201ENST00000389048 GNAT3A8MTJ3 354 aa17.93■□□□□ 0.46
ALK-201ENST00000389048 PNISRQ8TF01 805 aaKnown RBP17.93■□□□□ 0.46
ALK-201ENST00000389048 TRIM21P19474 475 aaKnown RBP17.93■□□□□ 0.46
ALK-201ENST00000389048 CA8P35219 290 aa17.93■□□□□ 0.46
ALK-201ENST00000389048 SNW1Q13573 536 aaKnown RBP17.93■□□□□ 0.46
ALK-201ENST00000389048 ZNF213O14771 459 aa17.93■□□□□ 0.46
ALK-201ENST00000389048 VPS36Q86VN1 386 aa17.93■□□□□ 0.46
ALK-201ENST00000389048 ZNF444Q8N0Y2 327 aaPredicted RBP17.93■□□□□ 0.46
ALK-201ENST00000389048 CEP135Q66GS9 1140 aa17.92■□□□□ 0.46
ALK-201ENST00000389048 CCDC12Q8WUD4 166 aaPredicted RBP17.92■□□□□ 0.46
ALK-201ENST00000389048 CAVIN4Q5BKX8 364 aa17.92■□□□□ 0.46
ALK-201ENST00000389048 CALCOCO1Q9P1Z2 691 aa17.92■□□□□ 0.46
ALK-201ENST00000389048 SNRKQ9NRH2 765 aa17.92■□□□□ 0.46
ALK-201ENST00000389048 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.92■□□□□ 0.46
ALK-201ENST00000389048 V9GYY5 206 aaPredicted RBP17.92■□□□□ 0.46
ALK-201ENST00000389048 CCDC150Q8NCX0 1101 aa17.92■□□□□ 0.46
ALK-201ENST00000389048 GPTP24298 496 aa17.92■□□□□ 0.46
ALK-201ENST00000389048 GJC1P36383 396 aa17.92■□□□□ 0.46
ALK-201ENST00000389048 PRDM11Q9NQV5 511 aa17.92■□□□□ 0.46
ALK-201ENST00000389048 ARL1P40616 181 aaPredicted RBP17.91■□□□□ 0.46
ALK-201ENST00000389048 GIMAP6Q6P9H5 292 aa17.91■□□□□ 0.46
ALK-201ENST00000389048 SAMM50Q9Y512 469 aa17.91■□□□□ 0.46
ALK-201ENST00000389048 TMOD2Q9NZR1 351 aa17.91■□□□□ 0.46
ALK-201ENST00000389048 CIZ1Q9ULV3 898 aaPredicted RBP17.91■□□□□ 0.46
ALK-201ENST00000389048 TMEM110-MUSTN1A8MSY1 372 aa17.91■□□□□ 0.46
ALK-201ENST00000389048 KIF1BPQ96EK5 621 aa17.91■□□□□ 0.46
ALK-201ENST00000389048 CTCFLQ8NI51 663 aaPredicted RBP17.91■□□□□ 0.46
ALK-201ENST00000389048 FYCO1Q9BQS8 1478 aa17.91■□□□□ 0.46
ALK-201ENST00000389048 TMPOP42166 694 aaKnown RBP17.91■□□□□ 0.46
ALK-201ENST00000389048 MICALCLQ6ZW33 695 aa17.91■□□□□ 0.46
ALK-201ENST00000389048 CCDC194A0A1B0GVG4 234 aa17.9■□□□□ 0.46
ALK-201ENST00000389048 ZNF354CQ86Y25 554 aa17.9■□□□□ 0.46
ALK-201ENST00000389048 ALS2CR12Q96Q35 445 aa17.9■□□□□ 0.46
ALK-201ENST00000389048 TBC1D2Q9BYX2 928 aa17.9■□□□□ 0.46
ALK-201ENST00000389048 CCDC160A6NGH7 325 aa17.9■□□□□ 0.46
ALK-201ENST00000389048 TAF7Q15545 349 aaPredicted RBP17.9■□□□□ 0.46
ALK-201ENST00000389048 SYCP3Q8IZU3 236 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms