RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 CCDC39Q9UFE4 941 aa-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 KDM2AQ9Y2K7 1162 aa-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 MAST4O15021 2626 aa-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 NOTCH4Q99466 2003 aa-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 NTN3O00634 580 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 NUAK1O60285 661 aa-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 IGLV1-40P01703 118 aa-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 MX2P20592 715 aa-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 COMPP49747 757 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 KRTAP10-4P60372 401 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 TRA2BP62995 288 aaKnown RBP-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 ZNF827Q17R98 1081 aa-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 RC3H1Q5TC82 1133 aaKnown RBP-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 HIST2H2BDQ6DRA6 164 aa-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 FAM117BQ6P1L5 589 aa-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 LENG1Q96BZ8 264 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 TEPSINQ96N21 525 aa-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 ZNF747Q9BV97 191 aa-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 NSFL1CQ9UNZ2 370 aaKnown RBP-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 MUC6Q6W4X9 2439 aa-0.58□□□□□ -2.5
RNU6-1340P-201ENST00000384438 ZNF503-AS2A6NEH8 195 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 SPDYE3A6NKU9 549 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 FAM229AH3BQW9 127 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 NPM3O75607 178 aaKnown RBP-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 MED14OSP0DP75 135 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 EPXP11678 715 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 PRG2P13727 222 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 DRD4P21917 467 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 MRPS21P82921 87 aaKnown RBP-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 SF3B4Q15427 424 aaKnown RBP eCLIP-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 MLANAQ16655 118 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 SPRED3Q2MJR0 410 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 SLCO4C1Q6ZQN7 724 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 ZSCAN29Q8IWY8 852 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 TP53INP2Q8IXH6 220 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 GOLGA6L1Q8N7Z2 621 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 Q8N9P0 234 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 IGFBPL1Q8WX77 278 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 ZG16BQ96DA0 208 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 ZNF837Q96EG3 531 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 BDH2Q9BUT1 245 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 MDFICQ9P1T7 246 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 FCF1Q9Y324 198 aaKnown RBP-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 HS3ST3A1Q9Y663 406 aa-0.59□□□□□ -2.5
RNU6-1340P-201ENST00000384438 FBN1P35555 2871 aaKnown RBP-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ATXN7O15265 892 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 GAS8-AS1O95177 125 aa-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 BMP2P12643 396 aa-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 NID1P14543 1247 aa-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 CCKBRP32239 447 aa-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ZC3H6P61129 1189 aaKnown RBP-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 TRIM32Q13049 653 aa-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 FHL2Q14192 279 aa-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 CRTC2Q53ET0 693 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 CPZQ66K79 652 aa-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ZNF414Q96IQ9 312 aa-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 IRF2BPLQ9H1B7 796 aa-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 VPS33BQ9H267 617 aa-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ANGEL1Q9UNK9 670 aaKnown RBP-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 MMP24Q9Y5R2 645 aa-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 WASF2Q9Y6W5 498 aa-0.6□□□□□ -2.51
RNU6-1340P-201ENST00000384438 WASLO00401 505 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-1340P-201ENST00000384438 CBFA2T3O75081 653 aa-0.61□□□□□ -2.51
RNU6-1340P-201ENST00000384438 LINC00310P59036 64 aa-0.61□□□□□ -2.51
RNU6-1340P-201ENST00000384438 SKOR1P84550 965 aa-0.61□□□□□ -2.51
RNU6-1340P-201ENST00000384438 KRTAP6-1Q3LI64 71 aa-0.61□□□□□ -2.51
RNU6-1340P-201ENST00000384438 DGKKQ5KSL6 1271 aa-0.61□□□□□ -2.51
RNU6-1340P-201ENST00000384438 NPNTQ6UXI9 565 aa-0.61□□□□□ -2.51
RNU6-1340P-201ENST00000384438 CHSY3Q70JA7 882 aa-0.61□□□□□ -2.51
RNU6-1340P-201ENST00000384438 TMEM151BQ8IW70 566 aa-0.61□□□□□ -2.51
RNU6-1340P-201ENST00000384438 GMCL1Q96IK5 515 aa-0.61□□□□□ -2.51
RNU6-1340P-201ENST00000384438 SMG5Q9UPR3 1016 aaKnown RBP-0.61□□□□□ -2.51
RNU6-1340P-201ENST00000384438 PCDHB3Q9Y5E6 796 aa-0.61□□□□□ -2.51
RNU6-1340P-201ENST00000384438 FIGNL2A6NMB9 653 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 IQCJ-SCHIP1C9J366 451 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 K7ESM1 405 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 KRT86O43790 486 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 HILS1P60008 231 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 DPTQ07507 201 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 KRT81Q14533 505 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 MSMPQ1L6U9 139 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 LARP1Q6PKG0 1096 aaKnown RBP-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ATG14Q6ZNE5 492 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 SPRED1Q7Z699 444 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 LINC00528Q8N1L1 170 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ZNF366Q8N895 744 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 AGBL5Q8NDL9 886 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 LCE3DQ9BYE3 92 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 PAK6Q9NQU5 681 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 LRP12Q9Y561 859 aa-0.62□□□□□ -2.51
RNU6-1340P-201ENST00000384438 A0A0A6YYK5 440 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 TRIM6-TRIM34B2RNG4 842 aa-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ZBTB24O43167 697 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ADH1CP00326 375 aa-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 GLI1P08151 1106 aa-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 CDK4P11802 303 aa-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 KRT9P35527 623 aa-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 WDR4P57081 412 aaKnown RBP-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 HYAL1Q12794 435 aa-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 TRIM28Q13263 835 aaKnown RBP-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms