RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 PCDHGC4Q9Y5F7 938 aa6.15□□□□□ -1.42
RNU6-1040P-201ENST00000383974 PCDHGA11Q9Y5H2 935 aa6.15□□□□□ -1.42
RNU6-1040P-201ENST00000383974 A0A1W2PNR3 127 aa6.14□□□□□ -1.43
RNU6-1040P-201ENST00000383974 DCDC2BA2VCK2 349 aa6.14□□□□□ -1.43
RNU6-1040P-201ENST00000383974 A6NJY4 79 aa6.14□□□□□ -1.43
RNU6-1040P-201ENST00000383974 PROCP04070 461 aa6.14□□□□□ -1.43
RNU6-1040P-201ENST00000383974 AMPD1P23109 780 aa6.14□□□□□ -1.43
RNU6-1040P-201ENST00000383974 EML3Q32P44 896 aa6.14□□□□□ -1.43
RNU6-1040P-201ENST00000383974 ARSJQ5FYB0 599 aaPredicted RBP6.14□□□□□ -1.43
RNU6-1040P-201ENST00000383974 NLRP8Q86W28 1048 aa6.14□□□□□ -1.43
RNU6-1040P-201ENST00000383974 SLC4A9Q96Q91 983 aa6.14□□□□□ -1.43
RNU6-1040P-201ENST00000383974 HCN2Q9UL51 889 aa6.14□□□□□ -1.43
RNU6-1040P-201ENST00000383974 CDK2AP1O14519 115 aa6.13□□□□□ -1.43
RNU6-1040P-201ENST00000383974 ATXN7O15265 892 aaPredicted RBP6.13□□□□□ -1.43
RNU6-1040P-201ENST00000383974 ARAFP10398 606 aa6.13□□□□□ -1.43
RNU6-1040P-201ENST00000383974 SKIP12755 728 aa6.13□□□□□ -1.43
RNU6-1040P-201ENST00000383974 HOXB4P17483 251 aaPredicted RBP6.13□□□□□ -1.43
RNU6-1040P-201ENST00000383974 COL8A1P27658 744 aa6.13□□□□□ -1.43
RNU6-1040P-201ENST00000383974 POM121Q96HA1 1249 aa6.13□□□□□ -1.43
RNU6-1040P-201ENST00000383974 ALG2Q9H553 416 aa6.13□□□□□ -1.43
RNU6-1040P-201ENST00000383974 ZDHHC3Q9NYG2 299 aa6.13□□□□□ -1.43
RNU6-1040P-201ENST00000383974 KRBA1A5PL33 1030 aa6.12□□□□□ -1.43
RNU6-1040P-201ENST00000383974 NEURL1BA8MQ27 555 aa6.12□□□□□ -1.43
RNU6-1040P-201ENST00000383974 MAPTP10636 758 aaKnown RBP6.12□□□□□ -1.43
RNU6-1040P-201ENST00000383974 EPXP11678 715 aa6.12□□□□□ -1.43
RNU6-1040P-201ENST00000383974 PRKCSHP14314 528 aaPredicted RBP6.12□□□□□ -1.43
RNU6-1040P-201ENST00000383974 TATP17735 454 aaPredicted RBP6.12□□□□□ -1.43
RNU6-1040P-201ENST00000383974 CD33P20138 364 aa6.12□□□□□ -1.43
RNU6-1040P-201ENST00000383974 GTF2IP78347 998 aa6.12□□□□□ -1.43
RNU6-1040P-201ENST00000383974 TNP2Q05952 138 aa6.12□□□□□ -1.43
RNU6-1040P-201ENST00000383974 NCOA4Q13772 614 aa6.12□□□□□ -1.43
RNU6-1040P-201ENST00000383974 CABP1Q9NZU7 370 aa6.12□□□□□ -1.43
RNU6-1040P-201ENST00000383974 NOD1Q9Y239 953 aa6.12□□□□□ -1.43
RNU6-1040P-201ENST00000383974 PARP3Q9Y6F1 533 aa6.12□□□□□ -1.43
RNU6-1040P-201ENST00000383974 KHNYNO15037 678 aaKnown RBP6.11□□□□□ -1.43
RNU6-1040P-201ENST00000383974 DGKGP49619 791 aa6.11□□□□□ -1.43
RNU6-1040P-201ENST00000383974 PSME1Q06323 249 aa6.11□□□□□ -1.43
RNU6-1040P-201ENST00000383974 LINC00114Q6XXX2 140 aa6.11□□□□□ -1.43
RNU6-1040P-201ENST00000383974 DEPDC4Q8N2C3 294 aa6.11□□□□□ -1.43
RNU6-1040P-201ENST00000383974 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.11□□□□□ -1.43
RNU6-1040P-201ENST00000383974 NFATC2IPQ8NCF5 419 aa6.11□□□□□ -1.43
RNU6-1040P-201ENST00000383974 SUV39H2Q9H5I1 410 aa6.11□□□□□ -1.43
RNU6-1040P-201ENST00000383974 ZNF358Q9NW07 568 aa6.11□□□□□ -1.43
RNU6-1040P-201ENST00000383974 SCHIP1Q9P0W5 487 aaPredicted RBP6.11□□□□□ -1.43
RNU6-1040P-201ENST00000383974 USP17L5A8MUK1 530 aa6.1□□□□□ -1.43
RNU6-1040P-201ENST00000383974 BACH1O14867 736 aa6.1□□□□□ -1.43
RNU6-1040P-201ENST00000383974 FAM157BP0CG42 384 aa6.1□□□□□ -1.43
RNU6-1040P-201ENST00000383974 TXLNAP40222 546 aa6.1□□□□□ -1.43
RNU6-1040P-201ENST00000383974 GRIN2CQ14957 1233 aa6.1□□□□□ -1.43
RNU6-1040P-201ENST00000383974 FAM182BQ5T319 152 aa6.1□□□□□ -1.43
RNU6-1040P-201ENST00000383974 ZDHHC1Q8WTX9 485 aa6.1□□□□□ -1.43
RNU6-1040P-201ENST00000383974 ZIC5Q96T25 663 aa6.1□□□□□ -1.43
RNU6-1040P-201ENST00000383974 GNB5O14775 395 aa6.09□□□□□ -1.43
RNU6-1040P-201ENST00000383974 LZTS3O60299 673 aaPredicted RBP6.09□□□□□ -1.43
RNU6-1040P-201ENST00000383974 ADAM23O75077 832 aa6.09□□□□□ -1.43
RNU6-1040P-201ENST00000383974 ADH6P28332 368 aa6.09□□□□□ -1.43
RNU6-1040P-201ENST00000383974 EPHA4P54764 986 aa6.09□□□□□ -1.43
RNU6-1040P-201ENST00000383974 BICDL1Q6ZP65 573 aa6.09□□□□□ -1.43
RNU6-1040P-201ENST00000383974 ALYREFQ86V81 257 aaKnown RBP6.09□□□□□ -1.43
RNU6-1040P-201ENST00000383974 FCHSD1Q86WN1 690 aa6.09□□□□□ -1.43
RNU6-1040P-201ENST00000383974 WWC1Q8IX03 1113 aa6.09□□□□□ -1.43
RNU6-1040P-201ENST00000383974 BTBD6Q96KE9 485 aa6.09□□□□□ -1.43
RNU6-1040P-201ENST00000383974 KLF15Q9UIH9 416 aa6.09□□□□□ -1.43
RNU6-1040P-201ENST00000383974 GJA3Q9Y6H8 435 aa6.09□□□□□ -1.43
RNU6-1040P-201ENST00000383974 POM121CA8CG34 1229 aa6.08□□□□□ -1.44
RNU6-1040P-201ENST00000383974 EFSO43281 561 aa6.08□□□□□ -1.44
RNU6-1040P-201ENST00000383974 SAMD5Q5TGI4 173 aa6.08□□□□□ -1.44
RNU6-1040P-201ENST00000383974 CHSY3Q70JA7 882 aa6.08□□□□□ -1.44
RNU6-1040P-201ENST00000383974 SLC9A9Q8IVB4 645 aa6.08□□□□□ -1.44
RNU6-1040P-201ENST00000383974 ADAMTS19Q8TE59 1207 aa6.08□□□□□ -1.44
RNU6-1040P-201ENST00000383974 L3MBTL2Q969R5 705 aa6.08□□□□□ -1.44
RNU6-1040P-201ENST00000383974 AVENQ9NQS1 362 aaPredicted RBP6.08□□□□□ -1.44
RNU6-1040P-201ENST00000383974 STRN4Q9NRL3 753 aa6.08□□□□□ -1.44
RNU6-1040P-201ENST00000383974 PIK3R2O00459 728 aa6.07□□□□□ -1.44
RNU6-1040P-201ENST00000383974 PCBP4P57723 403 aaKnown RBP6.07□□□□□ -1.44
RNU6-1040P-201ENST00000383974 TBCELQ5QJ74 424 aa6.07□□□□□ -1.44
RNU6-1040P-201ENST00000383974 ZNF468Q5VIY5 522 aaPredicted RBP6.07□□□□□ -1.44
RNU6-1040P-201ENST00000383974 TNS4Q8IZW8 715 aa6.07□□□□□ -1.44
RNU6-1040P-201ENST00000383974 KIAA1024Q9UPX6 916 aa6.07□□□□□ -1.44
RNU6-1040P-201ENST00000383974 USP17L3A6NCW0 530 aa6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 USP17L4A6NCW7 530 aa6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 RAD21O60216 631 aa6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 UBTFP17480 764 aaKnown RBP6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 NOS2P35228 1153 aa6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 TEAD4Q15561 434 aa6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 SH3PXD2AQ5TCZ1 1133 aa6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 USP17L2Q6R6M4 530 aa6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 LRRC69Q6ZNQ3 347 aa6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 USP17L1Q7RTZ2 530 aa6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 TPCN2Q8NHX9 752 aa6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 UCN2Q96RP3 112 aa6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 MARK1Q9P0L2 795 aa6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 PRR12Q9ULL5 1215 aa6.06□□□□□ -1.44
RNU6-1040P-201ENST00000383974 EML1O00423 815 aa6.05□□□□□ -1.44
RNU6-1040P-201ENST00000383974 BAG6P46379 1132 aa6.05□□□□□ -1.44
RNU6-1040P-201ENST00000383974 CLDN10P78369 228 aa6.05□□□□□ -1.44
RNU6-1040P-201ENST00000383974 TRIM50Q86XT4 487 aa6.05□□□□□ -1.44
RNU6-1040P-201ENST00000383974 PLEKHM2Q8IWE5 1019 aa6.05□□□□□ -1.44
RNU6-1040P-201ENST00000383974 NOP53Q9NZM5 478 aaKnown RBP6.05□□□□□ -1.44
RNU6-1040P-201ENST00000383974 ZNF232Q9UNY5 417 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms