RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 CPLX1O14810 134 aa22.49■■□□□ 1.19
CSPG5-202ENST00000383738 TRDNQ13061 729 aa22.49■■□□□ 1.19
CSPG5-202ENST00000383738 SF3A1Q15459 793 aaKnown RBP22.49■■□□□ 1.19
CSPG5-202ENST00000383738 NFXL1Q6ZNB6 911 aa22.49■■□□□ 1.19
CSPG5-202ENST00000383738 IDH1O75874 414 aaKnown RBP22.49■■□□□ 1.19
CSPG5-202ENST00000383738 MX1P20591 662 aa22.49■■□□□ 1.19
CSPG5-202ENST00000383738 PRIM1P49642 420 aaKnown RBP22.49■■□□□ 1.19
CSPG5-202ENST00000383738 ABCC3O15438 1527 aa22.48■■□□□ 1.19
CSPG5-202ENST00000383738 IL2RBP14784 551 aa22.48■■□□□ 1.19
CSPG5-202ENST00000383738 DDB1Q16531 1140 aa22.48■■□□□ 1.19
CSPG5-202ENST00000383738 RNF20Q5VTR2 975 aa22.48■■□□□ 1.19
CSPG5-202ENST00000383738 HYPKQ9NX55 129 aa22.48■■□□□ 1.19
CSPG5-202ENST00000383738 TBC1D9Q6ZT07 1266 aa22.48■■□□□ 1.19
CSPG5-202ENST00000383738 IL16Q14005 1332 aa22.48■■□□□ 1.19
CSPG5-202ENST00000383738 METTL24Q5JXM2 366 aa22.47■■□□□ 1.19
CSPG5-202ENST00000383738 SETD1BQ9UPS6 1966 aaKnown RBP22.47■■□□□ 1.19
CSPG5-202ENST00000383738 MTERF4Q7Z6M4 381 aaKnown RBP22.47■■□□□ 1.19
CSPG5-202ENST00000383738 ERICH4A6NGS2 130 aa22.47■■□□□ 1.19
CSPG5-202ENST00000383738 DTNBO60941 627 aa22.47■■□□□ 1.19
CSPG5-202ENST00000383738 CCDC158Q5M9N0 1113 aa22.47■■□□□ 1.19
CSPG5-202ENST00000383738 TRPM2O94759 1503 aa22.47■■□□□ 1.19
CSPG5-202ENST00000383738 EFCAB6Q5THR3 1501 aa22.47■■□□□ 1.19
CSPG5-202ENST00000383738 BECN2A8MW95 431 aa22.46■■□□□ 1.19
CSPG5-202ENST00000383738 PPFIA3O75145 1194 aa22.46■■□□□ 1.19
CSPG5-202ENST00000383738 CHAMP1Q96JM3 812 aa22.46■■□□□ 1.19
CSPG5-202ENST00000383738 RALYLQ86SE5 291 aaKnown RBP22.46■■□□□ 1.19
CSPG5-202ENST00000383738 CREBRFQ8IUR6 639 aa22.46■■□□□ 1.19
CSPG5-202ENST00000383738 SMC3Q9UQE7 1217 aa22.46■■□□□ 1.19
CSPG5-202ENST00000383738 ZSCAN23Q3MJ62 389 aa22.46■■□□□ 1.19
CSPG5-202ENST00000383738 KIF1BPQ96EK5 621 aa22.46■■□□□ 1.19
CSPG5-202ENST00000383738 DHX16O60231 1041 aaKnown RBP22.45■■□□□ 1.18
CSPG5-202ENST00000383738 BICD2Q8TD16 824 aa22.45■■□□□ 1.18
CSPG5-202ENST00000383738 GOLGA6L19H0YKK7 550 aa22.45■■□□□ 1.18
CSPG5-202ENST00000383738 RNMTO43148 476 aaKnown RBP22.45■■□□□ 1.18
CSPG5-202ENST00000383738 MBD3O95983 291 aa22.45■■□□□ 1.18
CSPG5-202ENST00000383738 ERC1Q8IUD2 1116 aa22.45■■□□□ 1.18
CSPG5-202ENST00000383738 ATP2B1P20020 1258 aa22.44■■□□□ 1.18
CSPG5-202ENST00000383738 FAM182BQ5T319 152 aa22.44■■□□□ 1.18
CSPG5-202ENST00000383738 TRIM5Q9C035 493 aa22.44■■□□□ 1.18
CSPG5-202ENST00000383738 IQSEC3Q9UPP2 1182 aaPredicted RBP22.44■■□□□ 1.18
CSPG5-202ENST00000383738 A1BGP04217 495 aa22.44■■□□□ 1.18
CSPG5-202ENST00000383738 IL17REQ8NFR9 667 aa22.44■■□□□ 1.18
CSPG5-202ENST00000383738 LRRFIP1Q32MZ4 808 aaKnown RBP22.44■■□□□ 1.18
CSPG5-202ENST00000383738 CGNQ9P2M7 1197 aaKnown RBP22.44■■□□□ 1.18
CSPG5-202ENST00000383738 KIF3AQ9Y496 699 aa22.44■■□□□ 1.18
CSPG5-202ENST00000383738 KLHDC4Q8TBB5 520 aa22.43■■□□□ 1.18
CSPG5-202ENST00000383738 PPP4R3BQ5MIZ7 849 aa22.43■■□□□ 1.18
CSPG5-202ENST00000383738 RASSF8Q8NHQ8 419 aa22.43■■□□□ 1.18
CSPG5-202ENST00000383738 TTC12Q9H892 705 aaPredicted RBP22.43■■□□□ 1.18
CSPG5-202ENST00000383738 KDM5DQ9BY66 1539 aa22.42■■□□□ 1.18
CSPG5-202ENST00000383738 PDCL2Q8N4E4 241 aa22.42■■□□□ 1.18
CSPG5-202ENST00000383738 PTPRCP08575 1304 aa22.42■■□□□ 1.18
CSPG5-202ENST00000383738 ATP6V1AP38606 617 aa22.42■■□□□ 1.18
CSPG5-202ENST00000383738 NOL10Q9BSC4 688 aaKnown RBP22.42■■□□□ 1.18
CSPG5-202ENST00000383738 ZPR1O75312 459 aa22.41■■□□□ 1.18
CSPG5-202ENST00000383738 HMGN5P82970 282 aaKnown RBP22.41■■□□□ 1.18
CSPG5-202ENST00000383738 CEBPZQ03701 1054 aaKnown RBP22.41■■□□□ 1.18
CSPG5-202ENST00000383738 LMBR1LQ6UX01 489 aa22.41■■□□□ 1.18
CSPG5-202ENST00000383738 VPS53Q5VIR6 699 aa22.41■■□□□ 1.18
CSPG5-202ENST00000383738 CCDC24Q8N4L8 307 aa22.41■■□□□ 1.18
CSPG5-202ENST00000383738 KDM5CP41229 1560 aa22.41■■□□□ 1.18
CSPG5-202ENST00000383738 MAP3K5Q99683 1374 aa22.41■■□□□ 1.18
CSPG5-202ENST00000383738 IFIT5Q13325 482 aaKnown RBP22.4■■□□□ 1.18
CSPG5-202ENST00000383738 TPD52L1Q16890 204 aaPredicted RBP22.4■■□□□ 1.18
CSPG5-202ENST00000383738 KLHL40Q2TBA0 621 aa22.4■■□□□ 1.18
CSPG5-202ENST00000383738 SASS6Q6UVJ0 657 aa22.4■■□□□ 1.18
CSPG5-202ENST00000383738 SYNE3Q6ZMZ3 975 aa22.4■■□□□ 1.18
CSPG5-202ENST00000383738 C17orf53Q8N3J3 647 aaPredicted RBP22.4■■□□□ 1.18
CSPG5-202ENST00000383738 FAM98CQ17RN3 349 aaKnown RBP22.4■■□□□ 1.18
CSPG5-202ENST00000383738 ZNF496Q96IT1 587 aaPredicted RBP22.4■■□□□ 1.18
CSPG5-202ENST00000383738 SBNO1A3KN83 1393 aa22.4■■□□□ 1.18
CSPG5-202ENST00000383738 LDHAL6AQ6ZMR3 332 aa22.4■■□□□ 1.18
CSPG5-202ENST00000383738 ZGPATQ8N5A5 531 aaKnown RBP22.4■■□□□ 1.18
CSPG5-202ENST00000383738 OTUD7AQ8TE49 926 aaPredicted RBP22.4■■□□□ 1.18
CSPG5-202ENST00000383738 NPC1L1Q9UHC9 1359 aa22.39■■□□□ 1.17
CSPG5-202ENST00000383738 HELBQ8NG08 1087 aaPredicted RBP22.39■■□□□ 1.17
CSPG5-202ENST00000383738 CHL1O00533 1208 aa22.39■■□□□ 1.17
CSPG5-202ENST00000383738 AKAP17AQ02040 695 aaKnown RBP22.39■■□□□ 1.17
CSPG5-202ENST00000383738 ZNF790Q6PG37 636 aa22.38■■□□□ 1.17
CSPG5-202ENST00000383738 FERMT3Q86UX7 667 aa22.38■■□□□ 1.17
CSPG5-202ENST00000383738 CLTCL1P53675 1640 aa22.38■■□□□ 1.17
CSPG5-202ENST00000383738 PIK3R4Q99570 1358 aa22.38■■□□□ 1.17
CSPG5-202ENST00000383738 SIRT1Q96EB6 747 aa22.38■■□□□ 1.17
CSPG5-202ENST00000383738 OFD1O75665 1012 aa22.37■■□□□ 1.17
CSPG5-202ENST00000383738 CAMK4Q16566 473 aa22.37■■□□□ 1.17
CSPG5-202ENST00000383738 ATP6V1DQ9Y5K8 247 aa22.37■■□□□ 1.17
CSPG5-202ENST00000383738 HOMER1Q86YM7 354 aa22.37■■□□□ 1.17
CSPG5-202ENST00000383738 JAKMIP1Q96N16 626 aaKnown RBP22.37■■□□□ 1.17
CSPG5-202ENST00000383738 ZBTB40Q9NUA8 1239 aa22.37■■□□□ 1.17
CSPG5-202ENST00000383738 RBSNQ9H1K0 784 aa22.36■■□□□ 1.17
CSPG5-202ENST00000383738 PLEKHG1Q9ULL1 1385 aa22.36■■□□□ 1.17
CSPG5-202ENST00000383738 SLC4A8Q2Y0W8 1093 aa22.36■■□□□ 1.17
CSPG5-202ENST00000383738 LRP2BPQ9P2M1 347 aa22.36■■□□□ 1.17
CSPG5-202ENST00000383738 ERBB4Q15303 1308 aa22.36■■□□□ 1.17
CSPG5-202ENST00000383738 KCNQ4P56696 695 aa22.36■■□□□ 1.17
CSPG5-202ENST00000383738 SF3B2Q13435 895 aaKnown RBP22.36■■□□□ 1.17
CSPG5-202ENST00000383738 PRPF40BQ6NWY9 871 aaKnown RBP22.35■■□□□ 1.17
CSPG5-202ENST00000383738 ZBTB9Q96C00 473 aa22.35■■□□□ 1.17
CSPG5-202ENST00000383738 CWC25Q9NXE8 425 aaPredicted RBP22.35■■□□□ 1.17
CSPG5-202ENST00000383738 RAI14Q9P0K7 980 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms