RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 PRAMEF22A3QJZ6 481 aa18.38■□□□□ 0.53
SYNGR1-204ENST00000381535 SNRPA1P09661 255 aaKnown RBP18.38■□□□□ 0.53
SYNGR1-204ENST00000381535 MYT1Q01538 1121 aa18.38■□□□□ 0.53
SYNGR1-204ENST00000381535 DDB1Q16531 1140 aa18.38■□□□□ 0.53
SYNGR1-204ENST00000381535 CHPF2Q9P2E5 772 aa18.38■□□□□ 0.53
SYNGR1-204ENST00000381535 NRAPQ86VF7 1730 aa18.37■□□□□ 0.53
SYNGR1-204ENST00000381535 IGHDP01880 384 aa18.37■□□□□ 0.53
SYNGR1-204ENST00000381535 SF3B2Q13435 895 aaKnown RBP18.37■□□□□ 0.53
SYNGR1-204ENST00000381535 FKBP5Q13451 457 aaPredicted RBP18.37■□□□□ 0.53
SYNGR1-204ENST00000381535 DEFB132Q7Z7B7 95 aa18.37■□□□□ 0.53
SYNGR1-204ENST00000381535 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
SYNGR1-204ENST00000381535 TMOD3Q9NYL9 352 aa18.37■□□□□ 0.53
SYNGR1-204ENST00000381535 DBF4Q9UBU7 674 aaPredicted RBP18.37■□□□□ 0.53
SYNGR1-204ENST00000381535 KDM2BQ8NHM5 1336 aa18.37■□□□□ 0.53
SYNGR1-204ENST00000381535 RWDD1Q9H446 243 aaPredicted RBP18.36■□□□□ 0.53
SYNGR1-204ENST00000381535 F6X3S4 739 aa18.35■□□□□ 0.53
SYNGR1-204ENST00000381535 CCT4P50991 539 aaKnown RBP18.35■□□□□ 0.53
SYNGR1-204ENST00000381535 CACNA1FO60840 1977 aa18.35■□□□□ 0.53
SYNGR1-204ENST00000381535 SHANK3Q9BYB0 1731 aa18.35■□□□□ 0.53
SYNGR1-204ENST00000381535 SLC4A10Q6U841 1118 aa18.34■□□□□ 0.53
SYNGR1-204ENST00000381535 PIGBQ92521 554 aa18.34■□□□□ 0.53
SYNGR1-204ENST00000381535 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
SYNGR1-204ENST00000381535 USP16Q9Y5T5 823 aa18.34■□□□□ 0.53
SYNGR1-204ENST00000381535 ANXA1P04083 346 aa18.33■□□□□ 0.52
SYNGR1-204ENST00000381535 FAM182BQ5T319 152 aa18.33■□□□□ 0.52
SYNGR1-204ENST00000381535 DDX21Q9NR30 783 aaKnown RBP eCLIP18.33■□□□□ 0.52
SYNGR1-204ENST00000381535 PDIA6Q15084 440 aa18.31■□□□□ 0.52
SYNGR1-204ENST00000381535 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
SYNGR1-204ENST00000381535 FAM196AQ6ZSG2 479 aa18.31■□□□□ 0.52
SYNGR1-204ENST00000381535 MARCH10Q8NA82 808 aaPredicted RBP18.31■□□□□ 0.52
SYNGR1-204ENST00000381535 TNS2Q63HR2 1409 aa18.31■□□□□ 0.52
SYNGR1-204ENST00000381535 BRWD3Q6RI45 1802 aa18.3■□□□□ 0.52
SYNGR1-204ENST00000381535 BAG6P46379 1132 aa18.3■□□□□ 0.52
SYNGR1-204ENST00000381535 PRIM1P49642 420 aaKnown RBP18.3■□□□□ 0.52
SYNGR1-204ENST00000381535 PTCD1O75127 700 aaKnown RBP18.29■□□□□ 0.52
SYNGR1-204ENST00000381535 HDAC1Q13547 482 aaPredicted RBP18.29■□□□□ 0.52
SYNGR1-204ENST00000381535 ATG3Q9NT62 314 aa18.29■□□□□ 0.52
SYNGR1-204ENST00000381535 ASAP1Q9ULH1 1129 aa18.29■□□□□ 0.52
SYNGR1-204ENST00000381535 THSD7AQ9UPZ6 1657 aa18.28■□□□□ 0.52
SYNGR1-204ENST00000381535 PI4KAP2A4QPH2 592 aa18.28■□□□□ 0.52
SYNGR1-204ENST00000381535 PI4KAP1Q8N8J0 262 aa18.28■□□□□ 0.52
SYNGR1-204ENST00000381535 DNAAF4Q8WXU2 420 aa18.28■□□□□ 0.52
SYNGR1-204ENST00000381535 SYTL4Q96C24 671 aaPredicted RBP18.28■□□□□ 0.52
SYNGR1-204ENST00000381535 C1orf115Q9H7X2 142 aa18.28■□□□□ 0.52
SYNGR1-204ENST00000381535 DDX58O95786 925 aaKnown RBP18.27■□□□□ 0.52
SYNGR1-204ENST00000381535 MYL6BP14649 208 aa18.27■□□□□ 0.52
SYNGR1-204ENST00000381535 KSR2Q6VAB6 950 aa18.27■□□□□ 0.52
SYNGR1-204ENST00000381535 WNK3Q9BYP7 1800 aa18.27■□□□□ 0.52
SYNGR1-204ENST00000381535 KAT6BQ8WYB5 2073 aa18.26■□□□□ 0.51
SYNGR1-204ENST00000381535 EN1Q05925 392 aaPredicted RBP18.26■□□□□ 0.51
SYNGR1-204ENST00000381535 AIMP1Q12904 312 aaKnown RBP18.26■□□□□ 0.51
SYNGR1-204ENST00000381535 TEX13AQ9BXU3 409 aaPredicted RBP18.26■□□□□ 0.51
SYNGR1-204ENST00000381535 BCL9O00512 1426 aa18.25■□□□□ 0.51
SYNGR1-204ENST00000381535 COPS6Q7L5N1 327 aa18.25■□□□□ 0.51
SYNGR1-204ENST00000381535 VSIG10Q8N0Z9 540 aa18.25■□□□□ 0.51
SYNGR1-204ENST00000381535 ACSBG1Q96GR2 724 aa18.25■□□□□ 0.51
SYNGR1-204ENST00000381535 MEIS3Q99687 375 aa18.25■□□□□ 0.51
SYNGR1-204ENST00000381535 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
SYNGR1-204ENST00000381535 SRCIN1Q9C0H9 1055 aa18.25■□□□□ 0.51
SYNGR1-204ENST00000381535 ERBB4Q15303 1308 aa18.24■□□□□ 0.51
SYNGR1-204ENST00000381535 TOGARAM1Q9Y4F4 1720 aa18.24■□□□□ 0.51
SYNGR1-204ENST00000381535 TRIM37O94972 964 aa18.24■□□□□ 0.51
SYNGR1-204ENST00000381535 BEND3Q5T5X7 828 aa18.24■□□□□ 0.51
SYNGR1-204ENST00000381535 XAGE3Q8WTP9 111 aa18.24■□□□□ 0.51
SYNGR1-204ENST00000381535 MAP3K2Q9Y2U5 619 aa18.24■□□□□ 0.51
SYNGR1-204ENST00000381535 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
SYNGR1-204ENST00000381535 ADCY9O60503 1353 aa18.23■□□□□ 0.51
SYNGR1-204ENST00000381535 A1BGP04217 495 aa18.23■□□□□ 0.51
SYNGR1-204ENST00000381535 GNAI3P08754 354 aa18.23■□□□□ 0.51
SYNGR1-204ENST00000381535 RIC3Q7Z5B4 369 aa18.23■□□□□ 0.51
SYNGR1-204ENST00000381535 RPAP2Q8IXW5 612 aaPredicted RBP18.23■□□□□ 0.51
SYNGR1-204ENST00000381535 CAMKK2Q96RR4 588 aa18.23■□□□□ 0.51
SYNGR1-204ENST00000381535 NBPF26B4DH59 902 aa18.22■□□□□ 0.51
SYNGR1-204ENST00000381535 GNAI2P04899 355 aa18.22■□□□□ 0.51
SYNGR1-204ENST00000381535 PIP4K2AP48426 406 aaPredicted RBP18.22■□□□□ 0.51
SYNGR1-204ENST00000381535 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
SYNGR1-204ENST00000381535 NBPF10Q6P3W6 841 aaKnown RBP18.22■□□□□ 0.51
SYNGR1-204ENST00000381535 LRP10Q7Z4F1 713 aa18.22■□□□□ 0.51
SYNGR1-204ENST00000381535 SKAP1Q86WV1 359 aa18.22■□□□□ 0.51
SYNGR1-204ENST00000381535 SIRT2Q8IXJ6 389 aa18.22■□□□□ 0.51
SYNGR1-204ENST00000381535 NBPF15Q8N660 670 aa18.22■□□□□ 0.51
SYNGR1-204ENST00000381535 C5P01031 1676 aa18.22■□□□□ 0.51
SYNGR1-204ENST00000381535 ITGB4P16144 1822 aa18.21■□□□□ 0.51
SYNGR1-204ENST00000381535 PXDNLA1KZ92 1463 aa18.21■□□□□ 0.51
SYNGR1-204ENST00000381535 ANKRD13DQ6ZTN6 518 aa18.21■□□□□ 0.51
SYNGR1-204ENST00000381535 DNAJC10Q8IXB1 793 aa18.21■□□□□ 0.51
SYNGR1-204ENST00000381535 ANKRD44Q8N8A2 993 aa18.21■□□□□ 0.51
SYNGR1-204ENST00000381535 USP44Q9H0E7 712 aa18.21■□□□□ 0.51
SYNGR1-204ENST00000381535 PDZRN3Q9UPQ7 1066 aa18.21■□□□□ 0.51
SYNGR1-204ENST00000381535 PAPPAQ13219 1627 aa18.2■□□□□ 0.5
SYNGR1-204ENST00000381535 ALDH1L1O75891 902 aa18.2■□□□□ 0.5
SYNGR1-204ENST00000381535 STARD3NLO95772 234 aa18.2■□□□□ 0.5
SYNGR1-204ENST00000381535 SMC5Q8IY18 1101 aa18.2■□□□□ 0.5
SYNGR1-204ENST00000381535 UBR2Q8IWV8 1755 aa18.19■□□□□ 0.5
SYNGR1-204ENST00000381535 APBA3O96018 575 aa18.19■□□□□ 0.5
SYNGR1-204ENST00000381535 EZH2Q15910 746 aaKnown RBP18.19■□□□□ 0.5
SYNGR1-204ENST00000381535 CEP85Q6P2H3 762 aa18.19■□□□□ 0.5
SYNGR1-204ENST00000381535 TSHZ2Q9NRE2 1034 aa18.19■□□□□ 0.5
SYNGR1-204ENST00000381535 ATP10DQ9P241 1426 aa18.18■□□□□ 0.5
SYNGR1-204ENST00000381535 LINS1Q8NG48 757 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms