RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 CEP112Q8N8E3 955 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 ARHGAP45Q92619 1136 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 DISP1Q96F81 1524 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 TMED8Q6PL24 325 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-203ENST00000381196 DMTNQ08495 405 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 KIF20BQ96Q89 1820 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 LUC7L3O95232 432 aaKnown RBP5.7□□□□□ -1.5
PTPRD-203ENST00000381196 HDAC1Q13547 482 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-203ENST00000381196 ZMYND15Q9H091 742 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 RTN4Q9NQC3 1192 aaKnown RBP5.7□□□□□ -1.5
PTPRD-203ENST00000381196 OLFM4Q6UX06 510 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 PNISRQ8TF01 805 aaKnown RBP5.7□□□□□ -1.5
PTPRD-203ENST00000381196 GOLIM4O00461 696 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 P3H4Q92791 437 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 IFT57Q9NWB7 429 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 RTEL1-TNFRSF6BF6WH68 1400 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 BCORL1Q5H9F3 1711 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 IKQ13123 557 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-203ENST00000381196 CENPHQ9H3R5 247 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 PHAXQ9H814 394 aaKnown RBP5.69□□□□□ -1.5
PTPRD-203ENST00000381196 PATL2C9JE40 543 aaKnown RBP5.69□□□□□ -1.5
PTPRD-203ENST00000381196 RGS22Q8NE09 1264 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 KINO60870 393 aaKnown RBP5.69□□□□□ -1.5
PTPRD-203ENST00000381196 EIF5P55010 431 aaKnown RBP5.69□□□□□ -1.5
PTPRD-203ENST00000381196 TBC1D32Q96NH3 1257 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 SYCP2Q9BX26 1530 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 DTNBP1Q96EV8 351 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 EIF3DO15371 548 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTPRD-203ENST00000381196 CDKL5O76039 1030 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 ZNF445P59923 1031 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 PLEKHO1Q53GL0 409 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-203ENST00000381196 WWC2Q6AWC2 1192 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 PTPRKQ15262 1439 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 MYRIPQ8NFW9 859 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 GNL3LQ9NVN8 582 aaKnown RBP5.69□□□□□ -1.5
PTPRD-203ENST00000381196 CHD1O14646 1710 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 CKAP4Q07065 602 aaKnown RBP5.69□□□□□ -1.5
PTPRD-203ENST00000381196 TPD52L1Q16890 204 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-203ENST00000381196 C10orf67Q8IYJ2 551 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 ABCC10Q5T3U5 1492 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 CCDC196A0A1B0GTZ2 297 aa5.69□□□□□ -1.5
PTPRD-203ENST00000381196 DIAPH1O60610 1272 aaKnown RBP5.69□□□□□ -1.5
PTPRD-203ENST00000381196 AIMP1Q12904 312 aaKnown RBP5.69□□□□□ -1.5
PTPRD-203ENST00000381196 G3BP1Q13283 466 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTPRD-203ENST00000381196 PODNQ7Z5L7 613 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 TAX1BP1Q86VP1 789 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 CPSF2Q9P2I0 782 aaKnown RBP5.68□□□□□ -1.5
PTPRD-203ENST00000381196 ITSN1Q15811 1721 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 FAM177BA6PVY3 158 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 EZRP15311 586 aaKnown RBP5.68□□□□□ -1.5
PTPRD-203ENST00000381196 KRT85P78386 507 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 DEPDC5O75140 1603 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 TOM1O60784 492 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 TMEM132AQ24JP5 1023 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 WDR66Q8TBY9 1149 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPRD-203ENST00000381196 TMOD2Q9NZR1 351 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 SBNO2Q9Y2G9 1366 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 QRICH2Q9H0J4 1663 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 ANKRD27Q96NW4 1050 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 MSH6P52701 1360 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 IMMTQ16891 758 aaKnown RBP5.68□□□□□ -1.5
PTPRD-203ENST00000381196 GBP6Q6ZN66 633 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 SMARCC1Q92922 1105 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-203ENST00000381196 IFIT2P09913 472 aaKnown RBP5.68□□□□□ -1.5
PTPRD-203ENST00000381196 MED4Q9NPJ6 270 aa5.68□□□□□ -1.5
PTPRD-203ENST00000381196 KDM6BO15054 1643 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 TRAPPC8Q9Y2L5 1435 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 UBXN4Q92575 508 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 RIC3Q7Z5B4 369 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 IMPACTQ9P2X3 320 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 CASZ1Q86V15 1759 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 APBA1Q02410 837 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 RIPPLY1Q0D2K3 151 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 CT47A1Q5JQC4 288 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-203ENST00000381196 ARFGAP2Q8N6H7 521 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 NSRP1Q9H0G5 558 aaKnown RBP5.67□□□□□ -1.5
PTPRD-203ENST00000381196 SPG7Q9UQ90 795 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 SMC2O95347 1197 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 GNAI3P08754 354 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 RBM5P52756 815 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPRD-203ENST00000381196 FILIP1LQ4L180 1135 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 SPECC1LQ69YQ0 1117 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 PAF1Q8N7H5 531 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 TTC14Q96N46 770 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 NLRP5P59047 1200 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 IFFO1Q0D2I5 559 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 TTLL12Q14166 644 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-203ENST00000381196 CCDC146Q8IYE0 955 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 C16orf71Q8IYS4 520 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-203ENST00000381196 CCDC148Q8NFR7 591 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 ATP7AQ04656 1500 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 ERICH2A1L162 156 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 GBP7Q8N8V2 638 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-203ENST00000381196 ADAMTS2O95450 1211 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 LRSAM1Q6UWE0 723 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 HOMER1Q86YM7 354 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 ANKS4BQ8N8V4 417 aa5.67□□□□□ -1.5
PTPRD-203ENST00000381196 DDX54Q8TDD1 881 aaKnown RBP5.67□□□□□ -1.5
PTPRD-203ENST00000381196 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms