RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 C1orf141Q5JVX7 400 aa19.79■□□□□ 0.76
NKX3-1-201ENST00000380871 AXIN2Q9Y2T1 843 aa19.79■□□□□ 0.76
NKX3-1-201ENST00000380871 RGPD1P0DJD0 1748 aa19.79■□□□□ 0.76
NKX3-1-201ENST00000380871 MX1P20591 662 aa19.79■□□□□ 0.76
NKX3-1-201ENST00000380871 RNF214Q8ND24 703 aa19.79■□□□□ 0.76
NKX3-1-201ENST00000380871 ANKARQ7Z5J8 1434 aa19.79■□□□□ 0.76
NKX3-1-201ENST00000380871 UBTFL1P0CB47 393 aaPredicted RBP19.78■□□□□ 0.76
NKX3-1-201ENST00000380871 LRRCC1Q9C099 1032 aa19.78■□□□□ 0.76
NKX3-1-201ENST00000380871 NLRP2Q9NX02 1062 aa19.78■□□□□ 0.76
NKX3-1-201ENST00000380871 PRAMEF22A3QJZ6 481 aa19.78■□□□□ 0.76
NKX3-1-201ENST00000380871 MAP4K4O95819 1239 aaPredicted RBP19.78■□□□□ 0.76
NKX3-1-201ENST00000380871 MSNP26038 577 aaKnown RBP19.78■□□□□ 0.76
NKX3-1-201ENST00000380871 AIMP1Q12904 312 aaKnown RBP19.78■□□□□ 0.76
NKX3-1-201ENST00000380871 KCNH5Q8NCM2 988 aa19.78■□□□□ 0.76
NKX3-1-201ENST00000380871 GDPD2Q9HCC8 539 aa19.78■□□□□ 0.76
NKX3-1-201ENST00000380871 HTATSF1O43719 755 aaKnown RBP19.77■□□□□ 0.76
NKX3-1-201ENST00000380871 PI4KAP2A4QPH2 592 aa19.77■□□□□ 0.76
NKX3-1-201ENST00000380871 CSB-PGBD3P0DP91 1061 aa19.77■□□□□ 0.76
NKX3-1-201ENST00000380871 PLEKHO1Q53GL0 409 aaPredicted RBP19.77■□□□□ 0.76
NKX3-1-201ENST00000380871 PI4KAP1Q8N8J0 262 aa19.77■□□□□ 0.76
NKX3-1-201ENST00000380871 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.77■□□□□ 0.76
NKX3-1-201ENST00000380871 GNAI3P08754 354 aa19.76■□□□□ 0.75
NKX3-1-201ENST00000380871 CHMLP26374 656 aa19.76■□□□□ 0.75
NKX3-1-201ENST00000380871 CHRNA2Q15822 529 aa19.76■□□□□ 0.75
NKX3-1-201ENST00000380871 NUTM1Q86Y26 1132 aa19.76■□□□□ 0.75
NKX3-1-201ENST00000380871 TPRNQ4KMQ1 711 aa19.75■□□□□ 0.75
NKX3-1-201ENST00000380871 SURF6O75683 361 aaKnown RBP19.75■□□□□ 0.75
NKX3-1-201ENST00000380871 USP44Q9H0E7 712 aa19.75■□□□□ 0.75
NKX3-1-201ENST00000380871 HSPA2P54652 639 aa19.75■□□□□ 0.75
NKX3-1-201ENST00000380871 SLC39A6Q13433 755 aa19.75■□□□□ 0.75
NKX3-1-201ENST00000380871 EIF4A1P60842 406 aaKnown RBP19.74■□□□□ 0.75
NKX3-1-201ENST00000380871 DTNBO60941 627 aa19.74■□□□□ 0.75
NKX3-1-201ENST00000380871 PDLIM2Q96JY6 352 aa19.74■□□□□ 0.75
NKX3-1-201ENST00000380871 BRD1O95696 1058 aa19.73■□□□□ 0.75
NKX3-1-201ENST00000380871 LRSAM1Q6UWE0 723 aa19.73■□□□□ 0.75
NKX3-1-201ENST00000380871 SRCIN1Q9C0H9 1055 aa19.73■□□□□ 0.75
NKX3-1-201ENST00000380871 NBPF7P0C2Y1 421 aaPredicted RBP19.73■□□□□ 0.75
NKX3-1-201ENST00000380871 ARHGEF25Q86VW2 580 aa19.73■□□□□ 0.75
NKX3-1-201ENST00000380871 LARP6Q9BRS8 491 aaKnown RBP19.73■□□□□ 0.75
NKX3-1-201ENST00000380871 RRP9O43818 475 aaKnown RBP19.72■□□□□ 0.75
NKX3-1-201ENST00000380871 PIP4K2AP48426 406 aaPredicted RBP19.72■□□□□ 0.75
NKX3-1-201ENST00000380871 OS9Q13438 667 aaPredicted RBP19.72■□□□□ 0.75
NKX3-1-201ENST00000380871 NALCNQ8IZF0 1738 aa19.72■□□□□ 0.75
NKX3-1-201ENST00000380871 NPHP4O75161 1426 aaPredicted RBP19.72■□□□□ 0.75
NKX3-1-201ENST00000380871 ATF3P18847 181 aa19.72■□□□□ 0.75
NKX3-1-201ENST00000380871 ATP8B2P98198 1209 aa19.72■□□□□ 0.75
NKX3-1-201ENST00000380871 OFD1O75665 1012 aa19.71■□□□□ 0.75
NKX3-1-201ENST00000380871 PROSER3Q2NL68 480 aa19.71■□□□□ 0.75
NKX3-1-201ENST00000380871 PPP1R42Q7Z4L9 355 aa19.71■□□□□ 0.75
NKX3-1-201ENST00000380871 SRGAP3O43295 1099 aa19.71■□□□□ 0.75
NKX3-1-201ENST00000380871 GADD45BO75293 160 aaPredicted RBP19.71■□□□□ 0.75
NKX3-1-201ENST00000380871 TUBGCP6Q96RT7 1819 aa19.71■□□□□ 0.75
NKX3-1-201ENST00000380871 CUL4AQ13619 759 aa19.71■□□□□ 0.75
NKX3-1-201ENST00000380871 XRN1Q8IZH2 1706 aaKnown RBP19.7■□□□□ 0.74
NKX3-1-201ENST00000380871 RNMTO43148 476 aaKnown RBP19.7■□□□□ 0.74
NKX3-1-201ENST00000380871 NOL7Q9UMY1 257 aaKnown RBP19.7■□□□□ 0.74
NKX3-1-201ENST00000380871 R3HCC1Q9Y3T6 440 aaKnown RBP19.7■□□□□ 0.74
NKX3-1-201ENST00000380871 ADGRL3Q9HAR2 1447 aa19.69■□□□□ 0.74
NKX3-1-201ENST00000380871 MCCP23508 829 aa19.69■□□□□ 0.74
NKX3-1-201ENST00000380871 AKAP4Q5JQC9 854 aa19.69■□□□□ 0.74
NKX3-1-201ENST00000380871 MPNDQ8N594 471 aa19.69■□□□□ 0.74
NKX3-1-201ENST00000380871 DNAAF4Q8WXU2 420 aa19.69■□□□□ 0.74
NKX3-1-201ENST00000380871 MYL6BP14649 208 aa19.68■□□□□ 0.74
NKX3-1-201ENST00000380871 TPM2P07951 284 aa19.68■□□□□ 0.74
NKX3-1-201ENST00000380871 CWF19L2Q2TBE0 894 aaKnown RBP19.68■□□□□ 0.74
NKX3-1-201ENST00000380871 FMN2Q9NZ56 1722 aa19.68■□□□□ 0.74
NKX3-1-201ENST00000380871 RBM10P98175 930 aaKnown RBP19.68■□□□□ 0.74
NKX3-1-201ENST00000380871 RAPGEF4Q8WZA2 1011 aa19.68■□□□□ 0.74
NKX3-1-201ENST00000380871 JARID2Q92833 1246 aaPredicted RBP19.68■□□□□ 0.74
NKX3-1-201ENST00000380871 C9orf78Q9NZ63 289 aaPredicted RBP19.68■□□□□ 0.74
NKX3-1-201ENST00000380871 C19orf44Q9H6X5 657 aa19.66■□□□□ 0.74
NKX3-1-201ENST00000380871 STAP2Q9UGK3 403 aa19.66■□□□□ 0.74
NKX3-1-201ENST00000380871 MAP3K2Q9Y2U5 619 aa19.66■□□□□ 0.74
NKX3-1-201ENST00000380871 FAM208AQ9UK61 1670 aaKnown RBP19.66■□□□□ 0.74
NKX3-1-201ENST00000380871 MCM2P49736 904 aa19.66■□□□□ 0.74
NKX3-1-201ENST00000380871 NWD1Q149M9 1564 aa19.65■□□□□ 0.74
NKX3-1-201ENST00000380871 MBD3O95983 291 aa19.65■□□□□ 0.74
NKX3-1-201ENST00000380871 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.65■□□□□ 0.74
NKX3-1-201ENST00000380871 VSIG10Q8N0Z9 540 aa19.65■□□□□ 0.74
NKX3-1-201ENST00000380871 PA2G4Q9UQ80 394 aaKnown RBP19.64■□□□□ 0.74
NKX3-1-201ENST00000380871 ZKSCAN5Q9Y2L8 839 aa19.64■□□□□ 0.74
NKX3-1-201ENST00000380871 SOS1Q07889 1333 aaPredicted RBP19.64■□□□□ 0.73
NKX3-1-201ENST00000380871 CPA1P15085 419 aa19.64■□□□□ 0.73
NKX3-1-201ENST00000380871 ANAPC15P60006 121 aa19.64■□□□□ 0.73
NKX3-1-201ENST00000380871 USP48Q86UV5 1035 aa19.64■□□□□ 0.73
NKX3-1-201ENST00000380871 AMOTQ4VCS5 1084 aa19.64■□□□□ 0.73
NKX3-1-201ENST00000380871 HS1BP3Q53T59 392 aa19.63■□□□□ 0.73
NKX3-1-201ENST00000380871 NFATC2IPQ8NCF5 419 aa19.63■□□□□ 0.73
NKX3-1-201ENST00000380871 INTS4Q96HW7 963 aaKnown RBP19.63■□□□□ 0.73
NKX3-1-201ENST00000380871 TCHHQ07283 1943 aa19.63■□□□□ 0.73
NKX3-1-201ENST00000380871 ZNF500O60304 480 aaPredicted RBP19.63■□□□□ 0.73
NKX3-1-201ENST00000380871 HSPA4P34932 840 aa19.62■□□□□ 0.73
NKX3-1-201ENST00000380871 RASEFQ8IZ41 740 aa19.62■□□□□ 0.73
NKX3-1-201ENST00000380871 PI4K2BQ8TCG2 481 aa19.62■□□□□ 0.73
NKX3-1-201ENST00000380871 TSPY26PQ9H489 355 aa19.62■□□□□ 0.73
NKX3-1-201ENST00000380871 DBF4Q9UBU7 674 aaPredicted RBP19.62■□□□□ 0.73
NKX3-1-201ENST00000380871 RPAP1Q9BWH6 1393 aaPredicted RBP19.62■□□□□ 0.73
NKX3-1-201ENST00000380871 BEND3Q5T5X7 828 aa19.61■□□□□ 0.73
NKX3-1-201ENST00000380871 SPG7Q9UQ90 795 aa19.61■□□□□ 0.73
NKX3-1-201ENST00000380871 GIGYF1O75420 1035 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms