RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 BEND3Q5T5X7 828 aa23.93■■□□□ 1.42
GMDS-201ENST00000380805 HYPKQ9NX55 129 aa23.9■■□□□ 1.42
GMDS-201ENST00000380805 UBR2Q8IWV8 1755 aa23.9■■□□□ 1.42
GMDS-201ENST00000380805 PAPPAQ13219 1627 aa23.9■■□□□ 1.42
GMDS-201ENST00000380805 PI4KAP2A4QPH2 592 aa23.9■■□□□ 1.42
GMDS-201ENST00000380805 UBTFL1P0CB47 393 aaPredicted RBP23.9■■□□□ 1.42
GMDS-201ENST00000380805 TTC22Q5TAA0 569 aa23.9■■□□□ 1.42
GMDS-201ENST00000380805 PI4KAP1Q8N8J0 262 aa23.9■■□□□ 1.42
GMDS-201ENST00000380805 GSPT1P15170 499 aaKnown RBP23.89■■□□□ 1.41
GMDS-201ENST00000380805 C22orf23Q9BZE7 217 aa23.89■■□□□ 1.41
GMDS-201ENST00000380805 OSBPL3Q9H4L5 887 aa23.89■■□□□ 1.41
GMDS-201ENST00000380805 DDX21Q9NR30 783 aaKnown RBP eCLIP23.89■■□□□ 1.41
GMDS-201ENST00000380805 DAXXQ9UER7 740 aaPredicted RBP23.88■■□□□ 1.41
GMDS-201ENST00000380805 LRRFIP2Q9Y608 721 aaKnown RBP23.88■■□□□ 1.41
GMDS-201ENST00000380805 RBM25P49756 843 aaKnown RBP23.87■■□□□ 1.41
GMDS-201ENST00000380805 SSH3Q8TE77 659 aa23.87■■□□□ 1.41
GMDS-201ENST00000380805 CARD10Q9BWT7 1032 aa23.87■■□□□ 1.41
GMDS-201ENST00000380805 PCDH11XQ9BZA7 1347 aa23.87■■□□□ 1.41
GMDS-201ENST00000380805 PCDH11YQ9BZA8 1340 aa23.87■■□□□ 1.41
GMDS-201ENST00000380805 PNMA6EA0A0J9YXQ4 647 aa23.87■■□□□ 1.41
GMDS-201ENST00000380805 EIF5BO60841 1220 aaKnown RBP23.87■■□□□ 1.41
GMDS-201ENST00000380805 ALDH1L1O75891 902 aa23.87■■□□□ 1.41
GMDS-201ENST00000380805 MFAP1P55081 439 aaKnown RBP23.87■■□□□ 1.41
GMDS-201ENST00000380805 PDIA6Q15084 440 aa23.87■■□□□ 1.41
GMDS-201ENST00000380805 KSR2Q6VAB6 950 aa23.87■■□□□ 1.41
GMDS-201ENST00000380805 NFATC2IPQ8NCF5 419 aa23.87■■□□□ 1.41
GMDS-201ENST00000380805 C8orf37Q96NL8 207 aa23.87■■□□□ 1.41
GMDS-201ENST00000380805 SALL3Q9BXA9 1300 aa23.86■■□□□ 1.41
GMDS-201ENST00000380805 PRAMEF22A3QJZ6 481 aa23.86■■□□□ 1.41
GMDS-201ENST00000380805 BECN1Q14457 450 aa23.86■■□□□ 1.41
GMDS-201ENST00000380805 PROSER3Q2NL68 480 aa23.86■■□□□ 1.41
GMDS-201ENST00000380805 CDC45O75419 566 aa23.85■■□□□ 1.41
GMDS-201ENST00000380805 POLA2Q14181 598 aa23.85■■□□□ 1.41
GMDS-201ENST00000380805 MEX3CQ5U5Q3 659 aaKnown RBP23.85■■□□□ 1.41
GMDS-201ENST00000380805 TBC1D9Q6ZT07 1266 aa23.85■■□□□ 1.41
GMDS-201ENST00000380805 C16orf71Q8IYS4 520 aaPredicted RBP23.85■■□□□ 1.41
GMDS-201ENST00000380805 ANXA1P04083 346 aa23.84■■□□□ 1.41
GMDS-201ENST00000380805 NKX1-1Q15270 411 aaPredicted RBP23.84■■□□□ 1.41
GMDS-201ENST00000380805 COL14A1Q05707 1796 aaKnown RBP23.84■■□□□ 1.41
GMDS-201ENST00000380805 TOM1L2Q6ZVM7 507 aa23.84■■□□□ 1.41
GMDS-201ENST00000380805 NGLY1Q96IV0 654 aa23.84■■□□□ 1.41
GMDS-201ENST00000380805 SLC4A3P48751 1232 aa23.83■■□□□ 1.41
GMDS-201ENST00000380805 SLC39A6Q13433 755 aa23.83■■□□□ 1.41
GMDS-201ENST00000380805 OTUD7AQ8TE49 926 aaPredicted RBP23.83■■□□□ 1.41
GMDS-201ENST00000380805 SMARCA5O60264 1052 aaPredicted RBP23.82■■□□□ 1.4
GMDS-201ENST00000380805 ZCRB1Q8TBF4 217 aaKnown RBP23.82■■□□□ 1.4
GMDS-201ENST00000380805 ZNF496Q96IT1 587 aaPredicted RBP23.82■■□□□ 1.4
GMDS-201ENST00000380805 BTG4Q9NY30 223 aa23.82■■□□□ 1.4
GMDS-201ENST00000380805 MTX1Q13505 466 aa23.81■■□□□ 1.4
GMDS-201ENST00000380805 LRRCC1Q9C099 1032 aa23.81■■□□□ 1.4
GMDS-201ENST00000380805 MAP3K2Q9Y2U5 619 aa23.81■■□□□ 1.4
GMDS-201ENST00000380805 PLCH1Q4KWH8 1693 aa23.81■■□□□ 1.4
GMDS-201ENST00000380805 DDX58O95786 925 aaKnown RBP23.81■■□□□ 1.4
GMDS-201ENST00000380805 SNRPA1P09661 255 aaKnown RBP23.81■■□□□ 1.4
GMDS-201ENST00000380805 NBPF7P0C2Y1 421 aaPredicted RBP23.81■■□□□ 1.4
GMDS-201ENST00000380805 EXOC6BQ9Y2D4 811 aa23.81■■□□□ 1.4
GMDS-201ENST00000380805 UTYO14607 1347 aa23.81■■□□□ 1.4
GMDS-201ENST00000380805 IL2RBP14784 551 aa23.8■■□□□ 1.4
GMDS-201ENST00000380805 FMNL2Q96PY5 1086 aa23.8■■□□□ 1.4
GMDS-201ENST00000380805 LRP10Q7Z4F1 713 aa23.79■■□□□ 1.4
GMDS-201ENST00000380805 TTC5Q8N0Z6 440 aa23.79■■□□□ 1.4
GMDS-201ENST00000380805 LINS1Q8NG48 757 aa23.79■■□□□ 1.4
GMDS-201ENST00000380805 TOGARAM1Q9Y4F4 1720 aa23.79■■□□□ 1.4
GMDS-201ENST00000380805 ERVV-2B6SEH9 535 aa23.79■■□□□ 1.4
GMDS-201ENST00000380805 PDE1AP54750 535 aa23.79■■□□□ 1.4
GMDS-201ENST00000380805 CABP4P57796 275 aa23.79■■□□□ 1.4
GMDS-201ENST00000380805 FNBP4Q8N3X1 1017 aaPredicted RBP23.79■■□□□ 1.4
GMDS-201ENST00000380805 HDAC5Q9UQL6 1122 aa23.79■■□□□ 1.4
GMDS-201ENST00000380805 SLIT2O94813 1529 aa23.78■■□□□ 1.4
GMDS-201ENST00000380805 KCPQ6ZWJ8 1503 aa23.78■■□□□ 1.4
GMDS-201ENST00000380805 RAB11FIP3O75154 756 aa23.78■■□□□ 1.4
GMDS-201ENST00000380805 PPP1R42Q7Z4L9 355 aa23.78■■□□□ 1.4
GMDS-201ENST00000380805 ARFGEF2Q9Y6D5 1785 aa23.77■■□□□ 1.4
GMDS-201ENST00000380805 TBC1D2Q9BYX2 928 aa23.77■■□□□ 1.4
GMDS-201ENST00000380805 TNS2Q63HR2 1409 aa23.77■■□□□ 1.4
GMDS-201ENST00000380805 STRN4Q9NRL3 753 aa23.76■■□□□ 1.39
GMDS-201ENST00000380805 STAP2Q9UGK3 403 aa23.76■■□□□ 1.39
GMDS-201ENST00000380805 AFF2P51816 1311 aa23.76■■□□□ 1.39
GMDS-201ENST00000380805 AOX1Q06278 1338 aa23.76■■□□□ 1.39
GMDS-201ENST00000380805 ERBB4Q15303 1308 aa23.76■■□□□ 1.39
GMDS-201ENST00000380805 APBB1O00213 710 aa23.76■■□□□ 1.39
GMDS-201ENST00000380805 SDSP20132 328 aa23.76■■□□□ 1.39
GMDS-201ENST00000380805 LARP1Q6PKG0 1096 aaKnown RBP23.76■■□□□ 1.39
GMDS-201ENST00000380805 USP35Q9P2H5 1018 aa23.76■■□□□ 1.39
GMDS-201ENST00000380805 BCL9LQ86UU0 1499 aa23.75■■□□□ 1.39
GMDS-201ENST00000380805 WNK3Q9BYP7 1800 aa23.75■■□□□ 1.39
GMDS-201ENST00000380805 USP21Q9UK80 565 aa23.74■■□□□ 1.39
GMDS-201ENST00000380805 EVA1CP58658 441 aa23.73■■□□□ 1.39
GMDS-201ENST00000380805 DISP2A7MBM2 1401 aa23.73■■□□□ 1.39
GMDS-201ENST00000380805 NRAPQ86VF7 1730 aa23.73■■□□□ 1.39
GMDS-201ENST00000380805 SRGAP3O43295 1099 aa23.73■■□□□ 1.39
GMDS-201ENST00000380805 UNC5CLQ8IV45 518 aa23.73■■□□□ 1.39
GMDS-201ENST00000380805 NWD2Q9ULI1 1742 aa23.72■■□□□ 1.39
GMDS-201ENST00000380805 MX1P20591 662 aa23.72■■□□□ 1.39
GMDS-201ENST00000380805 HSP90AB4PQ58FF6 505 aa23.72■■□□□ 1.39
GMDS-201ENST00000380805 SNX21Q969T3 373 aa23.72■■□□□ 1.39
GMDS-201ENST00000380805 USP16Q9Y5T5 823 aa23.72■■□□□ 1.39
GMDS-201ENST00000380805 AFDNP55196 1824 aaKnown RBP23.72■■□□□ 1.39
GMDS-201ENST00000380805 NUP188Q5SRE5 1749 aa23.72■■□□□ 1.39
GMDS-201ENST00000380805 GRM8O00222 908 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms