RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 DPEP1P16444 411 aa23.14■■□□□ 1.3
HMGN1-204ENST00000380749 TEFQ10587 303 aa23.14■■□□□ 1.3
HMGN1-204ENST00000380749 DDR1Q08345 913 aa23.14■■□□□ 1.29
HMGN1-204ENST00000380749 ZNF526Q8TF50 670 aaPredicted RBP23.13■■□□□ 1.29
HMGN1-204ENST00000380749 ZBTB1Q9Y2K1 713 aa23.13■■□□□ 1.29
HMGN1-204ENST00000380749 FCHSD2O94868 740 aa23.12■■□□□ 1.29
HMGN1-204ENST00000380749 USPL1Q5W0Q7 1092 aa23.12■■□□□ 1.29
HMGN1-204ENST00000380749 SBF1O95248 1867 aa23.12■■□□□ 1.29
HMGN1-204ENST00000380749 NARFQ9UHQ1 456 aa23.11■■□□□ 1.29
HMGN1-204ENST00000380749 NUDCQ9Y266 331 aa23.11■■□□□ 1.29
HMGN1-204ENST00000380749 POLRMTO00411 1230 aaKnown RBP23.1■■□□□ 1.29
HMGN1-204ENST00000380749 STARD3NLO95772 234 aa23.1■■□□□ 1.29
HMGN1-204ENST00000380749 PRKAR2BP31323 418 aa23.09■■□□□ 1.29
HMGN1-204ENST00000380749 PIM2Q9P1W9 311 aa23.09■■□□□ 1.29
HMGN1-204ENST00000380749 DLG5Q8TDM6 1919 aa23.09■■□□□ 1.29
HMGN1-204ENST00000380749 HEG1Q9ULI3 1381 aa23.09■■□□□ 1.29
HMGN1-204ENST00000380749 IL17REQ8NFR9 667 aa23.08■■□□□ 1.29
HMGN1-204ENST00000380749 RSPH6AQ9H0K4 717 aa23.08■■□□□ 1.29
HMGN1-204ENST00000380749 BCORQ6W2J9 1755 aa23.08■■□□□ 1.29
HMGN1-204ENST00000380749 CEMIPQ8WUJ3 1361 aa23.08■■□□□ 1.28
HMGN1-204ENST00000380749 TM4SF1P30408 202 aa23.07■■□□□ 1.28
HMGN1-204ENST00000380749 ZNF790Q6PG37 636 aa23.07■■□□□ 1.28
HMGN1-204ENST00000380749 ARHGAP27Q6ZUM4 889 aa23.07■■□□□ 1.28
HMGN1-204ENST00000380749 CANXP27824 592 aaKnown RBP23.06■■□□□ 1.28
HMGN1-204ENST00000380749 PPP2R1AP30153 589 aa23.06■■□□□ 1.28
HMGN1-204ENST00000380749 DALRD3Q5D0E6 543 aaKnown RBP23.06■■□□□ 1.28
HMGN1-204ENST00000380749 CCDC88AQ3V6T2 1871 aa23.06■■□□□ 1.28
HMGN1-204ENST00000380749 A0A087WZG4 1122 aa23.05■■□□□ 1.28
HMGN1-204ENST00000380749 KCNA3P22001 575 aa23.05■■□□□ 1.28
HMGN1-204ENST00000380749 ZNF496Q96IT1 587 aaPredicted RBP23.05■■□□□ 1.28
HMGN1-204ENST00000380749 TEX13AQ9BXU3 409 aaPredicted RBP23.05■■□□□ 1.28
HMGN1-204ENST00000380749 ANKRD31Q8N7Z5 1873 aa23.05■■□□□ 1.28
HMGN1-204ENST00000380749 U2AF1L5P0DN76 240 aaPredicted RBP23.04■■□□□ 1.28
HMGN1-204ENST00000380749 U2AF1Q01081 240 aaKnown RBP eCLIP23.04■■□□□ 1.284e-7■■■■■ 29.1
HMGN1-204ENST00000380749 NFIXQ14938 502 aa23.04■■□□□ 1.28
HMGN1-204ENST00000380749 FMNL2Q96PY5 1086 aa23.04■■□□□ 1.28
HMGN1-204ENST00000380749 PHACTR3Q96KR7 559 aa23.03■■□□□ 1.28
HMGN1-204ENST00000380749 CHRNA5P30532 468 aa23.02■■□□□ 1.28
HMGN1-204ENST00000380749 CACNA1SQ13698 1873 aa23.02■■□□□ 1.28
HMGN1-204ENST00000380749 LAMB4A4D0S4 1761 aa23.02■■□□□ 1.28
HMGN1-204ENST00000380749 EIF5P55010 431 aaKnown RBP23.01■■□□□ 1.27
HMGN1-204ENST00000380749 BTBD11A6QL63 1104 aa23.01■■□□□ 1.27
HMGN1-204ENST00000380749 RTF1Q92541 710 aaKnown RBP23.01■■□□□ 1.27
HMGN1-204ENST00000380749 BCL2L12Q9HB09 334 aa23.01■■□□□ 1.27
HMGN1-204ENST00000380749 COL11A2P13942 1736 aaPredicted RBP23■■□□□ 1.27
HMGN1-204ENST00000380749 SERPINB2P05120 415 aa23■■□□□ 1.27
HMGN1-204ENST00000380749 NPM2Q86SE8 214 aaKnown RBP23■■□□□ 1.27
HMGN1-204ENST00000380749 ZNF330Q9Y3S2 320 aaPredicted RBP23■■□□□ 1.27
HMGN1-204ENST00000380749 TNRC6CQ9HCJ0 1690 aaKnown RBP23■■□□□ 1.27
HMGN1-204ENST00000380749 IL6STP40189 918 aaPredicted RBP22.99■■□□□ 1.27
HMGN1-204ENST00000380749 TIAM2Q8IVF5 1701 aa22.98■■□□□ 1.27
HMGN1-204ENST00000380749 KIF3CO14782 793 aa22.97■■□□□ 1.27
HMGN1-204ENST00000380749 C9orf131Q5VYM1 1079 aa22.97■■□□□ 1.27
HMGN1-204ENST00000380749 KDM3BQ7LBC6 1761 aa22.97■■□□□ 1.27
HMGN1-204ENST00000380749 ARFGEF2Q9Y6D5 1785 aa22.96■■□□□ 1.27
HMGN1-204ENST00000380749 BICDL1Q6ZP65 573 aa22.96■■□□□ 1.27
HMGN1-204ENST00000380749 CARMIL3Q8ND23 1372 aa22.96■■□□□ 1.27
HMGN1-204ENST00000380749 DICER1Q9UPY3 1922 aaKnown RBP22.95■■□□□ 1.26
HMGN1-204ENST00000380749 NEFMP07197 916 aa22.94■■□□□ 1.26
HMGN1-204ENST00000380749 HSPA6P17066 643 aa22.94■■□□□ 1.26
HMGN1-204ENST00000380749 MCM10Q7L590 875 aa22.94■■□□□ 1.26
HMGN1-204ENST00000380749 KCNQ3O43525 872 aa22.93■■□□□ 1.26
HMGN1-204ENST00000380749 HTATSF1O43719 755 aaKnown RBP22.93■■□□□ 1.26
HMGN1-204ENST00000380749 TBC1D9BQ66K14 1250 aa22.93■■□□□ 1.26
HMGN1-204ENST00000380749 RNF181Q9P0P0 153 aa22.93■■□□□ 1.26
HMGN1-204ENST00000380749 TBC1D2BQ9UPU7 963 aa22.93■■□□□ 1.26
HMGN1-204ENST00000380749 FER1L6Q2WGJ9 1857 aa22.93■■□□□ 1.26
HMGN1-204ENST00000380749 H0YIN7 160 aa22.92■■□□□ 1.26
HMGN1-204ENST00000380749 A1BGP04217 495 aa22.92■■□□□ 1.26
HMGN1-204ENST00000380749 C2CD5Q86YS7 1000 aa22.92■■□□□ 1.26
HMGN1-204ENST00000380749 TTLL6Q8N841 843 aa22.91■■□□□ 1.26
HMGN1-204ENST00000380749 SNRPA1P09661 255 aaKnown RBP22.9■■□□□ 1.26
HMGN1-204ENST00000380749 PDZRN3Q9UPQ7 1066 aa22.9■■□□□ 1.26
HMGN1-204ENST00000380749 KDM2BQ8NHM5 1336 aa22.9■■□□□ 1.26
HMGN1-204ENST00000380749 DZIP3Q86Y13 1208 aaKnown RBP22.89■■□□□ 1.26
HMGN1-204ENST00000380749 NMRK2Q9NPI5 230 aa22.89■■□□□ 1.26
HMGN1-204ENST00000380749 ZC3H4Q9UPT8 1303 aaKnown RBP22.89■■□□□ 1.25
HMGN1-204ENST00000380749 NPHP1O15259 732 aa22.89■■□□□ 1.25
HMGN1-204ENST00000380749 TOMM70O94826 608 aa22.89■■□□□ 1.25
HMGN1-204ENST00000380749 CAMTA2O94983 1202 aa22.89■■□□□ 1.25
HMGN1-204ENST00000380749 PDE6BP35913 854 aa22.89■■□□□ 1.25
HMGN1-204ENST00000380749 DCTN1Q14203 1278 aa22.89■■□□□ 1.25
HMGN1-204ENST00000380749 SETDB2Q96T68 719 aa22.89■■□□□ 1.25
HMGN1-204ENST00000380749 RASSF7Q02833 373 aa22.88■■□□□ 1.25
HMGN1-204ENST00000380749 PRR5LQ6MZQ0 368 aa22.88■■□□□ 1.25
HMGN1-204ENST00000380749 CNBD1Q8NA66 436 aa22.88■■□□□ 1.25
HMGN1-204ENST00000380749 USP16Q9Y5T5 823 aa22.88■■□□□ 1.25
HMGN1-204ENST00000380749 NUP98P52948 1817 aa22.87■■□□□ 1.25
HMGN1-204ENST00000380749 SLX4Q8IY92 1834 aa22.87■■□□□ 1.25
HMGN1-204ENST00000380749 BRIP1Q9BX63 1249 aa22.87■■□□□ 1.25
HMGN1-204ENST00000380749 ZNF652Q9Y2D9 606 aa22.87■■□□□ 1.25
HMGN1-204ENST00000380749 WDR90Q96KV7 1748 aa22.86■■□□□ 1.25
HMGN1-204ENST00000380749 ST5P78524 1137 aa22.86■■□□□ 1.25
HMGN1-204ENST00000380749 TAF7Q15545 349 aaPredicted RBP22.86■■□□□ 1.25
HMGN1-204ENST00000380749 C16orf71Q8IYS4 520 aaPredicted RBP22.86■■□□□ 1.25
HMGN1-204ENST00000380749 PRAMEF22A3QJZ6 481 aa22.85■■□□□ 1.25
HMGN1-204ENST00000380749 LMNB1P20700 586 aa22.85■■□□□ 1.25
HMGN1-204ENST00000380749 PIP4K2AP48426 406 aaPredicted RBP22.85■■□□□ 1.25
HMGN1-204ENST00000380749 ZNF622Q969S3 477 aaKnown RBP eCLIP22.84■■□□□ 1.25
HMGN1-204ENST00000380749 MAPK8IP3Q9UPT6 1336 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms