RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 ZSCAN26Q16670 478 aa7.82□□□□□ -1.16
RIPK1-202ENST00000380409 MCTP2Q6DN12 878 aa7.82□□□□□ -1.16
RIPK1-202ENST00000380409 ERO1AQ96HE7 468 aa7.82□□□□□ -1.16
RIPK1-202ENST00000380409 NOS1P29475 1434 aa7.82□□□□□ -1.16
RIPK1-202ENST00000380409 BRD1O95696 1058 aa7.82□□□□□ -1.16
RIPK1-202ENST00000380409 CCDC27Q2M243 656 aa7.82□□□□□ -1.16
RIPK1-202ENST00000380409 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.82□□□□□ -1.16
RIPK1-202ENST00000380409 CHAMP1Q96JM3 812 aa7.82□□□□□ -1.16
RIPK1-202ENST00000380409 MPNDQ8N594 471 aa7.82□□□□□ -1.16
RIPK1-202ENST00000380409 ZNF215Q9UL58 517 aaPredicted RBP7.82□□□□□ -1.16
RIPK1-202ENST00000380409 POGZQ7Z3K3 1410 aa7.82□□□□□ -1.16
RIPK1-202ENST00000380409 MADDQ8WXG6 1647 aa7.81□□□□□ -1.16
RIPK1-202ENST00000380409 FAXDC2Q96IV6 333 aa7.81□□□□□ -1.16
RIPK1-202ENST00000380409 DRC1Q96MC2 740 aa7.81□□□□□ -1.16
RIPK1-202ENST00000380409 L2HGDHQ9H9P8 463 aa7.81□□□□□ -1.16
RIPK1-202ENST00000380409 TTC31Q49AM3 519 aaPredicted RBP7.81□□□□□ -1.16
RIPK1-202ENST00000380409 CCDC93Q567U6 631 aa7.81□□□□□ -1.16
RIPK1-202ENST00000380409 FOXD4L5Q5VV16 416 aaPredicted RBP7.81□□□□□ -1.16
RIPK1-202ENST00000380409 CC2D2BQ6DHV5 1058 aa7.81□□□□□ -1.16
RIPK1-202ENST00000380409 FOXD4L4Q8WXT5 416 aaPredicted RBP7.81□□□□□ -1.16
RIPK1-202ENST00000380409 ITFG2Q969R8 447 aa7.81□□□□□ -1.16
RIPK1-202ENST00000380409 HECW2Q9P2P5 1572 aa7.81□□□□□ -1.16
RIPK1-202ENST00000380409 RABEP1Q15276 862 aa7.81□□□□□ -1.16
RIPK1-202ENST00000380409 ZC3H12AQ5D1E8 599 aaKnown RBP7.81□□□□□ -1.16
RIPK1-202ENST00000380409 CCDC191Q8NCU4 936 aa7.81□□□□□ -1.16
RIPK1-202ENST00000380409 SHANK2Q9UPX8 1470 aa7.81□□□□□ -1.16
RIPK1-202ENST00000380409 GOLGA6L6A8MZA4 724 aa7.8□□□□□ -1.16
RIPK1-202ENST00000380409 ELF2Q15723 593 aa7.8□□□□□ -1.16
RIPK1-202ENST00000380409 RNF20Q5VTR2 975 aa7.8□□□□□ -1.16
RIPK1-202ENST00000380409 ZGPATQ8N5A5 531 aaKnown RBP7.8□□□□□ -1.16
RIPK1-202ENST00000380409 MINK1Q8N4C8 1332 aaPredicted RBP7.8□□□□□ -1.16
RIPK1-202ENST00000380409 ZNF518AQ6AHZ1 1483 aa7.8□□□□□ -1.16
RIPK1-202ENST00000380409 MYH15Q9Y2K3 1946 aa7.8□□□□□ -1.16
RIPK1-202ENST00000380409 CLCN6P51797 869 aa7.8□□□□□ -1.16
RIPK1-202ENST00000380409 CFAP70Q5T0N1 1121 aa7.8□□□□□ -1.16
RIPK1-202ENST00000380409 TBC1D9Q6ZT07 1266 aa7.8□□□□□ -1.16
RIPK1-202ENST00000380409 TOMM22Q9NS69 142 aa7.8□□□□□ -1.16
RIPK1-202ENST00000380409 RBM28Q9NW13 759 aaKnown RBP7.8□□□□□ -1.16
RIPK1-202ENST00000380409 LRRFIP2Q9Y608 721 aaKnown RBP7.8□□□□□ -1.16
RIPK1-202ENST00000380409 CCDC196A0A1B0GTZ2 297 aa7.8□□□□□ -1.16
RIPK1-202ENST00000380409 CCDC112Q8NEF3 446 aa7.8□□□□□ -1.16
RIPK1-202ENST00000380409 V9GYY5 206 aaPredicted RBP7.8□□□□□ -1.16
RIPK1-202ENST00000380409 A2MP01023 1474 aa7.8□□□□□ -1.16
RIPK1-202ENST00000380409 ATP8B1O43520 1251 aa7.79□□□□□ -1.16
RIPK1-202ENST00000380409 TDO2P48775 406 aa7.79□□□□□ -1.16
RIPK1-202ENST00000380409 CORO7P57737 925 aa7.79□□□□□ -1.16
RIPK1-202ENST00000380409 MMS22LQ6ZRQ5 1243 aa7.79□□□□□ -1.16
RIPK1-202ENST00000380409 NOL8Q76FK4 1167 aaKnown RBP7.79□□□□□ -1.16
RIPK1-202ENST00000380409 OTUD6BQ8N6M0 293 aa7.79□□□□□ -1.16
RIPK1-202ENST00000380409 SPHKAPQ2M3C7 1700 aa7.79□□□□□ -1.16
RIPK1-202ENST00000380409 SGSM2O43147 1006 aa7.79□□□□□ -1.16
RIPK1-202ENST00000380409 TACO1Q9BSH4 297 aaKnown RBP7.79□□□□□ -1.16
RIPK1-202ENST00000380409 C9orf84Q5VXU9 1444 aa7.79□□□□□ -1.16
RIPK1-202ENST00000380409 TNNT1P13805 278 aa7.79□□□□□ -1.16
RIPK1-202ENST00000380409 GTF3C6Q969F1 213 aa7.79□□□□□ -1.16
RIPK1-202ENST00000380409 A1CFQ9NQ94 594 aaKnown RBP7.79□□□□□ -1.16
RIPK1-202ENST00000380409 NEO1Q92859 1461 aa7.79□□□□□ -1.16
RIPK1-202ENST00000380409 KIAA1210Q9ULL0 1709 aa7.79□□□□□ -1.16
RIPK1-202ENST00000380409 CHD2O14647 1828 aaKnown RBP7.79□□□□□ -1.16
RIPK1-202ENST00000380409 ATP6V1AP38606 617 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 NBPF6Q5VWK0 638 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 SLC4A10Q6U841 1118 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 NBPF5PQ86XG9 351 aaPredicted RBP7.78□□□□□ -1.16
RIPK1-202ENST00000380409 EXOC4Q96A65 974 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 IL17RAQ96F46 866 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 LTV1Q96GA3 475 aaPredicted RBP7.78□□□□□ -1.16
RIPK1-202ENST00000380409 NBPF4Q96M43 638 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 C1orf115Q9H7X2 142 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 POLR3AO14802 1390 aaPredicted RBP7.78□□□□□ -1.16
RIPK1-202ENST00000380409 UNC13BO14795 1591 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 CHMLP26374 656 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 TXNDC2Q86VQ3 553 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 PLA2G4DQ86XP0 818 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 TATDN2Q93075 761 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 MYO3AQ8NEV4 1616 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 MSH6P52701 1360 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 SYAP1Q96A49 352 aaPredicted RBP7.78□□□□□ -1.16
RIPK1-202ENST00000380409 C16orf45Q96MC5 204 aaPredicted RBP7.78□□□□□ -1.16
RIPK1-202ENST00000380409 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.78□□□□□ -1.16
RIPK1-202ENST00000380409 YTHDC2Q9H6S0 1430 aaKnown RBP7.78□□□□□ -1.16
RIPK1-202ENST00000380409 ZFYVE16Q7Z3T8 1539 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 PREX1Q8TCU6 1659 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 ELP1O95163 1332 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 GADD45BO75293 160 aaPredicted RBP7.78□□□□□ -1.16
RIPK1-202ENST00000380409 CCDC183Q5T5S1 534 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 GGNBP2Q9H3C7 697 aa7.78□□□□□ -1.16
RIPK1-202ENST00000380409 CWC15Q9P013 229 aaKnown RBP7.78□□□□□ -1.16
RIPK1-202ENST00000380409 SASH3O75995 380 aa7.77□□□□□ -1.17
RIPK1-202ENST00000380409 HCLS1P14317 486 aaPredicted RBP7.77□□□□□ -1.17
RIPK1-202ENST00000380409 PTGS1P23219 599 aa7.77□□□□□ -1.17
RIPK1-202ENST00000380409 CUL4AQ13619 759 aa7.77□□□□□ -1.17
RIPK1-202ENST00000380409 HDGFL2Q7Z4V5 671 aaPredicted RBP7.77□□□□□ -1.17
RIPK1-202ENST00000380409 GOLGA6L1Q8N7Z2 621 aa7.77□□□□□ -1.17
RIPK1-202ENST00000380409 EIF3CLB5ME19 914 aaKnown RBP7.77□□□□□ -1.17
RIPK1-202ENST00000380409 FOXD4L6Q3SYB3 417 aaPredicted RBP7.77□□□□□ -1.17
RIPK1-202ENST00000380409 ZSCAN25Q6NSZ9 544 aa7.77□□□□□ -1.17
RIPK1-202ENST00000380409 FOXD4L3Q6VB84 417 aaPredicted RBP7.77□□□□□ -1.17
RIPK1-202ENST00000380409 STAG1Q8WVM7 1258 aa7.77□□□□□ -1.17
RIPK1-202ENST00000380409 EIF3CQ99613 913 aaKnown RBP7.77□□□□□ -1.17
RIPK1-202ENST00000380409 RTL1A6NKG5 1358 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms