RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 MAP7D1Q3KQU3 841 aa12.96□□□□□ -0.34
PTCHD1-201ENST00000379361 PYM1Q9BRP8 204 aaKnown RBP12.96□□□□□ -0.34
PTCHD1-201ENST00000379361 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.34
PTCHD1-201ENST00000379361 SFPQP23246 707 aaKnown RBP eCLIP12.96□□□□□ -0.34
PTCHD1-201ENST00000379361 TAF12Q16514 161 aa12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 RASAL2Q9UJF2 1139 aa12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 A0A1W2PRG0 241 aa12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 CABP2Q9NPB3 220 aa12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 TMCO5BA8MYB1 307 aa12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 DDX46Q7L014 1031 aaKnown RBP12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 RNF41Q9H4P4 317 aaPredicted RBP12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 AMPD3Q01432 767 aa12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 CEP112Q8N8E3 955 aa12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 LRRC27Q9C0I9 530 aa12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 MAP1BP46821 2468 aaKnown RBP12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 MAP3K12Q12852 859 aa12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 KNL1Q8NG31 2342 aa12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 BMS1Q14692 1282 aaKnown RBP12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 NUP88Q99567 741 aaPredicted RBP12.95□□□□□ -0.34
PTCHD1-201ENST00000379361 POTEB2H3BUK9 544 aa12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 NAP1L3Q99457 506 aaPredicted RBP12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 SLC5A1P13866 664 aa12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 SPTY2D1Q68D10 685 aaPredicted RBP12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 YEATS4O95619 227 aa12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 PPP4R3BQ5MIZ7 849 aa12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 CALML4Q96GE6 196 aa12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 CTAGE5O15320 804 aa12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 MKRN1Q9UHC7 482 aaKnown RBP12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 BAG3O95817 575 aa12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 APBB1IPQ7Z5R6 666 aaPredicted RBP12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 ANKS4BQ8N8V4 417 aa12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 TXNDC2Q86VQ3 553 aa12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 PRPF40AO75400 957 aaKnown RBP12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 CACYBPQ9HB71 228 aaKnown RBP12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 IQCGQ9H095 443 aaKnown RBP12.94□□□□□ -0.34
PTCHD1-201ENST00000379361 SUPT6HQ7KZ85 1726 aaKnown RBP12.93□□□□□ -0.34
PTCHD1-201ENST00000379361 IDH1O75874 414 aaKnown RBP12.93□□□□□ -0.34
PTCHD1-201ENST00000379361 NLRP5P59047 1200 aa12.93□□□□□ -0.34
PTCHD1-201ENST00000379361 NUP62CLQ9H1M0 184 aa12.93□□□□□ -0.34
PTCHD1-201ENST00000379361 ERMNQ8TAM6 284 aa12.93□□□□□ -0.34
PTCHD1-201ENST00000379361 PDRG1Q9NUG6 133 aa12.93□□□□□ -0.34
PTCHD1-201ENST00000379361 NDC80O14777 642 aa12.93□□□□□ -0.34
PTCHD1-201ENST00000379361 NAPBQ9H115 298 aa12.93□□□□□ -0.34
PTCHD1-201ENST00000379361 HLA-DOAP06340 250 aa12.93□□□□□ -0.34
PTCHD1-201ENST00000379361 CNGA1P29973 690 aa12.93□□□□□ -0.34
PTCHD1-201ENST00000379361 IQCA1Q86XH1 822 aa12.93□□□□□ -0.34
PTCHD1-201ENST00000379361 CKAP2LQ8IYA6 745 aa12.93□□□□□ -0.34
PTCHD1-201ENST00000379361 DDX54Q8TDD1 881 aaKnown RBP12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 KLHL10Q6JEL2 608 aa12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 CEP83Q9Y592 693 aa12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 EHBP1Q8NDI1 1231 aa12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 FBF1Q8TES7 1133 aa12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 TRAF1Q13077 416 aa12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 ANKLE2Q86XL3 938 aa12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 KIAA1524Q8TCG1 905 aa12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 MSANTD4Q8NCY6 345 aa12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 VIMP08670 466 aaKnown RBP12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 BIRC2Q13490 618 aa12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 JAKMIP1Q96N16 626 aaKnown RBP12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 OPA1O60313 960 aa12.92□□□□□ -0.34
PTCHD1-201ENST00000379361 ZBTB24O43167 697 aaPredicted RBP12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 UQCRHLA0A096LP55 91 aa12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 TNNT1P13805 278 aa12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 LIG1P18858 919 aa12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 RANBP6O60518 1105 aaKnown RBP12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 TBCAO75347 108 aaKnown RBP12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 TPD52P55327 224 aaPredicted RBP12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 SLC4A2P04920 1241 aa12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 SMC1BQ8NDV3 1235 aa12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 MYOM3Q5VTT5 1437 aa12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 PRPHP41219 470 aa12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 GOLIM4O00461 696 aa12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 SLC12A7Q9Y666 1083 aa12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 TWISTNBQ3B726 338 aaPredicted RBP12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 CABP5Q9NP86 173 aa12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 ABCF2Q9UG63 623 aa12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 TMOD3Q9NYL9 352 aa12.91□□□□□ -0.34
PTCHD1-201ENST00000379361 CCDC194A0A1B0GVG4 234 aa12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 STMN4Q9H169 189 aaPredicted RBP12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 CCDC88BA6NC98 1476 aa12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 ZSCAN12O43309 604 aa12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 PSMC4P43686 418 aa12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 SPECC1Q5M775 1068 aa12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 KANK4Q5T7N3 995 aaPredicted RBP12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 PANK1Q8TE04 598 aa12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 NSRP1Q9H0G5 558 aaKnown RBP12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 HLTFQ14527 1009 aaKnown RBP eCLIP12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 SEPT6Q14141 434 aa12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 KIF21BO75037 1637 aa12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 KIF18AQ8NI77 898 aa12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 THEMISQ8N1K5 641 aaPredicted RBP12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 TCP11L1Q9NUJ3 509 aa12.9□□□□□ -0.34
PTCHD1-201ENST00000379361 MYH11P35749 1972 aa12.9□□□□□ -0.35
PTCHD1-201ENST00000379361 KMT5BQ4FZB7 885 aa12.89□□□□□ -0.35
PTCHD1-201ENST00000379361 CWC27Q6UX04 472 aaKnown RBP12.89□□□□□ -0.35
PTCHD1-201ENST00000379361 IMPG2Q9BZV3 1241 aa12.89□□□□□ -0.35
PTCHD1-201ENST00000379361 CTR9Q6PD62 1173 aa12.89□□□□□ -0.35
PTCHD1-201ENST00000379361 PDCL2Q8N4E4 241 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms