RNA–Protein interactions for RNA: ENST00000378543.2

FAAP20-201, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-201ENST00000378543 COL15A1P39059 1388 aa31.3■■■□□ 2.6
FAAP20-201ENST00000378543 KCNQ3O43525 872 aa31.3■■■□□ 2.6
FAAP20-201ENST00000378543 DDX10Q13206 875 aaKnown RBP31.3■■■□□ 2.6
FAAP20-201ENST00000378543 MCM10Q7L590 875 aa31.3■■■□□ 2.6
FAAP20-201ENST00000378543 BTBD11A6QL63 1104 aa31.29■■■□□ 2.6
FAAP20-201ENST00000378543 ZPR1O75312 459 aa31.29■■■□□ 2.6
FAAP20-201ENST00000378543 STARD3NLO95772 234 aa31.29■■■□□ 2.6
FAAP20-201ENST00000378543 CANXP27824 592 aaKnown RBP31.29■■■□□ 2.6
FAAP20-201ENST00000378543 DDR1Q08345 913 aa31.29■■■□□ 2.6
FAAP20-201ENST00000378543 RTF1Q92541 710 aaKnown RBP31.29■■■□□ 2.6
FAAP20-201ENST00000378543 TGFB2P61812 414 aa31.28■■■□□ 2.6
FAAP20-201ENST00000378543 DCTN1Q14203 1278 aa31.28■■■□□ 2.6
FAAP20-201ENST00000378543 FMNL2Q96PY5 1086 aa31.27■■■□□ 2.6
FAAP20-201ENST00000378543 NARFQ9UHQ1 456 aa31.27■■■□□ 2.6
FAAP20-201ENST00000378543 DLG5Q8TDM6 1919 aa31.27■■■□□ 2.6
FAAP20-201ENST00000378543 TM4SF1P30408 202 aa31.26■■■□□ 2.59
FAAP20-201ENST00000378543 TEX13AQ9BXU3 409 aaPredicted RBP31.26■■■□□ 2.59
FAAP20-201ENST00000378543 A0A0G2JLW4 131 aa31.25■■■□□ 2.59
FAAP20-201ENST00000378543 HTATSF1O43719 755 aaKnown RBP31.24■■■□□ 2.59
FAAP20-201ENST00000378543 POLRMTO00411 1230 aaKnown RBP31.23■■■□□ 2.59
FAAP20-201ENST00000378543 EIF5P55010 431 aaKnown RBP31.23■■■□□ 2.59
FAAP20-201ENST00000378543 PLEKHF1Q96S99 279 aa31.23■■■□□ 2.59
FAAP20-201ENST00000378543 BCL2L12Q9HB09 334 aa31.23■■■□□ 2.59
FAAP20-201ENST00000378543 DPEP1P16444 411 aa31.22■■■□□ 2.59
FAAP20-201ENST00000378543 BRCA1P38398 1863 aaKnown RBP31.21■■■□□ 2.59
FAAP20-201ENST00000378543 NEFMP07197 916 aa31.21■■■□□ 2.59
FAAP20-201ENST00000378543 AFDNP55196 1824 aaKnown RBP31.21■■■□□ 2.59
FAAP20-201ENST00000378543 A1BGP04217 495 aa31.19■■■□□ 2.58
FAAP20-201ENST00000378543 NFIXQ14938 502 aa31.19■■■□□ 2.58
FAAP20-201ENST00000378543 A0A087WZG4 1122 aa31.17■■■□□ 2.58
FAAP20-201ENST00000378543 KCNA3P22001 575 aa31.17■■■□□ 2.58
FAAP20-201ENST00000378543 BCS1LQ9Y276 419 aa31.17■■■□□ 2.58
FAAP20-201ENST00000378543 USP16Q9Y5T5 823 aa31.17■■■□□ 2.58
FAAP20-201ENST00000378543 PRAMEF22A3QJZ6 481 aa31.16■■■□□ 2.58
FAAP20-201ENST00000378543 ZNF330Q9Y3S2 320 aaPredicted RBP31.16■■■□□ 2.58
FAAP20-201ENST00000378543 NRXN2Q9P2S2 1712 aa31.15■■■□□ 2.58
FAAP20-201ENST00000378543 IL6STP40189 918 aaPredicted RBP31.15■■■□□ 2.58
FAAP20-201ENST00000378543 TAF7Q15545 349 aaPredicted RBP31.15■■■□□ 2.58
FAAP20-201ENST00000378543 NFE2L2Q16236 605 aa31.15■■■□□ 2.58
FAAP20-201ENST00000378543 PNNQ9H307 717 aaKnown RBP31.14■■■□□ 2.58
FAAP20-201ENST00000378543 MYBBP1AQ9BQG0 1328 aaKnown RBP31.14■■■□□ 2.58
FAAP20-201ENST00000378543 SCN7AQ01118 1682 aa31.13■■■□□ 2.57
FAAP20-201ENST00000378543 MIS18AQ9NYP9 233 aa31.13■■■□□ 2.57
FAAP20-201ENST00000378543 TBC1D2BQ9UPU7 963 aa31.13■■■□□ 2.57
FAAP20-201ENST00000378543 SNRPA1P09661 255 aaKnown RBP31.12■■■□□ 2.57
FAAP20-201ENST00000378543 SERPINB2P05120 415 aa31.11■■■□□ 2.57
FAAP20-201ENST00000378543 MAPK8IP3Q9UPT6 1336 aa31.11■■■□□ 2.57
FAAP20-201ENST00000378543 ATP10DQ9P241 1426 aa31.1■■■□□ 2.57
FAAP20-201ENST00000378543 CHRNA5P30532 468 aa31.1■■■□□ 2.57
FAAP20-201ENST00000378543 PIP4K2AP48426 406 aaPredicted RBP31.1■■■□□ 2.57
FAAP20-201ENST00000378543 BICDL1Q6ZP65 573 aa31.1■■■□□ 2.57
FAAP20-201ENST00000378543 ARFGEF1Q9Y6D6 1849 aa31.1■■■□□ 2.57
FAAP20-201ENST00000378543 KDM3BQ7LBC6 1761 aa31.1■■■□□ 2.57
FAAP20-201ENST00000378543 ADCY9O60503 1353 aa31.09■■■□□ 2.57
FAAP20-201ENST00000378543 THUMPD2Q9BTF0 503 aaKnown RBP31.09■■■□□ 2.57
FAAP20-201ENST00000378543 PIM2Q9P1W9 311 aa31.09■■■□□ 2.57
FAAP20-201ENST00000378543 TBC1D9BQ66K14 1250 aa31.08■■■□□ 2.57
FAAP20-201ENST00000378543 NPM2Q86SE8 214 aaKnown RBP31.07■■■□□ 2.56
FAAP20-201ENST00000378543 CAMTA2O94983 1202 aa31.06■■■□□ 2.56
FAAP20-201ENST00000378543 BCORQ6W2J9 1755 aa31.06■■■□□ 2.56
FAAP20-201ENST00000378543 ARHGAP27Q6ZUM4 889 aa31.05■■■□□ 2.56
FAAP20-201ENST00000378543 PNISRQ8TF01 805 aaKnown RBP31.05■■■□□ 2.56
FAAP20-201ENST00000378543 DZIP3Q86Y13 1208 aaKnown RBP31.04■■■□□ 2.56
FAAP20-201ENST00000378543 CARMIL3Q8ND23 1372 aa31.04■■■□□ 2.56
FAAP20-201ENST00000378543 LAMB4A4D0S4 1761 aa31.03■■■□□ 2.56
FAAP20-201ENST00000378543 DALRD3Q5D0E6 543 aaKnown RBP31.03■■■□□ 2.56
FAAP20-201ENST00000378543 PRKRIP1Q9H875 184 aaPredicted RBP31.03■■■□□ 2.56
FAAP20-201ENST00000378543 NBPF26B4DH59 902 aa31.02■■■□□ 2.56
FAAP20-201ENST00000378543 NBPF10Q6P3W6 841 aaKnown RBP31.02■■■□□ 2.56
FAAP20-201ENST00000378543 NBPF15Q8N660 670 aa31.02■■■□□ 2.56
FAAP20-201ENST00000378543 GIGYF1O75420 1035 aaPredicted RBP31.01■■■□□ 2.55
FAAP20-201ENST00000378543 DLEC1Q9Y238 1755 aa31.01■■■□□ 2.55
FAAP20-201ENST00000378543 ANKRD31Q8N7Z5 1873 aa31■■■□□ 2.55
FAAP20-201ENST00000378543 ZNF316A6NFI3 1004 aaPredicted RBP31■■■□□ 2.55
FAAP20-201ENST00000378543 RIPK4P57078 832 aa31■■■□□ 2.55
FAAP20-201ENST00000378543 C1QTNF8P60827 252 aa30.99■■■□□ 2.55
FAAP20-201ENST00000378543 EIF4A1P60842 406 aaKnown RBP30.99■■■□□ 2.55
FAAP20-201ENST00000378543 TMPOP42166 694 aaKnown RBP30.98■■■□□ 2.55
FAAP20-201ENST00000378543 ZNF526Q8TF50 670 aaPredicted RBP30.98■■■□□ 2.55
FAAP20-201ENST00000378543 SETDB2Q96T68 719 aa30.97■■■□□ 2.55
FAAP20-201ENST00000378543 PRR5LQ6MZQ0 368 aa30.96■■■□□ 2.55
FAAP20-201ENST00000378543 C2CD5Q86YS7 1000 aa30.96■■■□□ 2.55
FAAP20-201ENST00000378543 CCDC146Q8IYE0 955 aa30.96■■■□□ 2.55
FAAP20-201ENST00000378543 CCDC24Q8N4L8 307 aa30.96■■■□□ 2.55
FAAP20-201ENST00000378543 GPBP1L1Q9HC44 474 aaPredicted RBP30.96■■■□□ 2.55
FAAP20-201ENST00000378543 WDR43Q15061 677 aaKnown RBP eCLIP30.93■■■□□ 2.54
FAAP20-201ENST00000378543 CLEC4GQ6UXB4 293 aa30.93■■■□□ 2.54
FAAP20-201ENST00000378543 RRP7AQ9Y3A4 280 aaKnown RBP30.93■■■□□ 2.54
FAAP20-201ENST00000378543 H0YIN7 160 aa30.92■■■□□ 2.54
FAAP20-201ENST00000378543 BRIP1Q9BX63 1249 aa30.92■■■□□ 2.54
FAAP20-201ENST00000378543 TSPYL4Q9UJ04 414 aa30.91■■■□□ 2.54
FAAP20-201ENST00000378543 ADAMTS8Q9UP79 889 aa30.91■■■□□ 2.54
FAAP20-201ENST00000378543 COL11A2P13942 1736 aaPredicted RBP30.9■■■□□ 2.54
FAAP20-201ENST00000378543 LMOD3Q0VAK6 560 aa30.9■■■□□ 2.54
FAAP20-201ENST00000378543 NEUROD2Q15784 382 aa30.9■■■□□ 2.54
FAAP20-201ENST00000378543 TTLL6Q8N841 843 aa30.9■■■□□ 2.54
FAAP20-201ENST00000378543 CNBD1Q8NA66 436 aa30.9■■■□□ 2.54
FAAP20-201ENST00000378543 RUNDC1Q96C34 613 aa30.9■■■□□ 2.54
FAAP20-201ENST00000378543 ZNF652Q9Y2D9 606 aa30.9■■■□□ 2.54
FAAP20-201ENST00000378543 SBF1O95248 1867 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms