RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 FKBP8Q14318 412 aa22.57■■□□□ 1.2
RER1-202ENST00000378512 KDM3BQ7LBC6 1761 aa22.56■■□□□ 1.2
RER1-202ENST00000378512 USP42Q9H9J4 1324 aaKnown RBP22.56■■□□□ 1.2
RER1-202ENST00000378512 CYP19A1P11511 503 aaPredicted RBP22.56■■□□□ 1.2
RER1-202ENST00000378512 MCM10Q7L590 875 aa22.56■■□□□ 1.2
RER1-202ENST00000378512 HEG1Q9ULI3 1381 aa22.55■■□□□ 1.2
RER1-202ENST00000378512 DDR1Q08345 913 aa22.55■■□□□ 1.2
RER1-202ENST00000378512 NFE2L2Q16236 605 aa22.55■■□□□ 1.2
RER1-202ENST00000378512 RTF1Q92541 710 aaKnown RBP22.55■■□□□ 1.2
RER1-202ENST00000378512 ZNF496Q96IT1 587 aaPredicted RBP22.55■■□□□ 1.2
RER1-202ENST00000378512 CCDC87Q9NVE4 849 aa22.55■■□□□ 1.2
RER1-202ENST00000378512 ADCY9O60503 1353 aa22.54■■□□□ 1.2
RER1-202ENST00000378512 GIGYF1O75420 1035 aaPredicted RBP22.54■■□□□ 1.2
RER1-202ENST00000378512 NEFMP07197 916 aa22.54■■□□□ 1.2
RER1-202ENST00000378512 TTC5Q8N0Z6 440 aa22.54■■□□□ 1.2
RER1-202ENST00000378512 PARP3Q9Y6F1 533 aa22.54■■□□□ 1.2
RER1-202ENST00000378512 DPEP1P16444 411 aa22.53■■□□□ 1.2
RER1-202ENST00000378512 DCTN1Q14203 1278 aa22.53■■□□□ 1.2
RER1-202ENST00000378512 SOS1Q07889 1333 aaPredicted RBP22.52■■□□□ 1.2
RER1-202ENST00000378512 BTBD11A6QL63 1104 aa22.52■■□□□ 1.2
RER1-202ENST00000378512 ZBTB1Q9Y2K1 713 aa22.52■■□□□ 1.2
RER1-202ENST00000378512 TGFB2P61812 414 aa22.51■■□□□ 1.19
RER1-202ENST00000378512 ZNF526Q8TF50 670 aaPredicted RBP22.51■■□□□ 1.19
RER1-202ENST00000378512 MAPK8IP3Q9UPT6 1336 aa22.51■■□□□ 1.19
RER1-202ENST00000378512 KCNQ3O43525 872 aa22.5■■□□□ 1.19
RER1-202ENST00000378512 USPL1Q5W0Q7 1092 aa22.5■■□□□ 1.19
RER1-202ENST00000378512 BCS1LQ9Y276 419 aa22.5■■□□□ 1.19
RER1-202ENST00000378512 SENP3-EIF4A1A0A087X0R7 540 aa22.49■■□□□ 1.19
RER1-202ENST00000378512 KCNA3P22001 575 aa22.49■■□□□ 1.19
RER1-202ENST00000378512 FMNL2Q96PY5 1086 aa22.49■■□□□ 1.19
RER1-202ENST00000378512 TEX13AQ9BXU3 409 aaPredicted RBP22.49■■□□□ 1.19
RER1-202ENST00000378512 BRCA1P38398 1863 aaKnown RBP22.49■■□□□ 1.19
RER1-202ENST00000378512 TAF7Q15545 349 aaPredicted RBP22.48■■□□□ 1.19
RER1-202ENST00000378512 ADAMTS8Q9UP79 889 aa22.48■■□□□ 1.19
RER1-202ENST00000378512 LAMB4A4D0S4 1761 aa22.47■■□□□ 1.19
RER1-202ENST00000378512 COL15A1P39059 1388 aa22.47■■□□□ 1.19
RER1-202ENST00000378512 POLRMTO00411 1230 aaKnown RBP22.47■■□□□ 1.19
RER1-202ENST00000378512 TM4SF1P30408 202 aa22.47■■□□□ 1.19
RER1-202ENST00000378512 TMPOP42166 694 aaKnown RBP22.47■■□□□ 1.19
RER1-202ENST00000378512 BCL2L12Q9HB09 334 aa22.47■■□□□ 1.19
RER1-202ENST00000378512 STARD3NLO95772 234 aa22.46■■□□□ 1.19
RER1-202ENST00000378512 CANXP27824 592 aaKnown RBP22.46■■□□□ 1.19
RER1-202ENST00000378512 ZPR1O75312 459 aa22.45■■□□□ 1.18
RER1-202ENST00000378512 CHRNA5P30532 468 aa22.45■■□□□ 1.18
RER1-202ENST00000378512 WDR43Q15061 677 aaKnown RBP eCLIP22.45■■□□□ 1.18
RER1-202ENST00000378512 RUNDC1Q96C34 613 aa22.45■■□□□ 1.18
RER1-202ENST00000378512 EIF5P55010 431 aaKnown RBP22.44■■□□□ 1.18
RER1-202ENST00000378512 GPBP1L1Q9HC44 474 aaPredicted RBP22.44■■□□□ 1.18
RER1-202ENST00000378512 RIPK4P57078 832 aa22.43■■□□□ 1.18
RER1-202ENST00000378512 NFIXQ14938 502 aa22.43■■□□□ 1.18
RER1-202ENST00000378512 NARFQ9UHQ1 456 aa22.43■■□□□ 1.18
RER1-202ENST00000378512 ARHGAP27Q6ZUM4 889 aa22.42■■□□□ 1.18
RER1-202ENST00000378512 PNISRQ8TF01 805 aaKnown RBP22.42■■□□□ 1.18
RER1-202ENST00000378512 THUMPD2Q9BTF0 503 aaKnown RBP22.42■■□□□ 1.18
RER1-202ENST00000378512 AFDNP55196 1824 aaKnown RBP22.42■■□□□ 1.18
RER1-202ENST00000378512 SCN7AQ01118 1682 aa22.42■■□□□ 1.18
RER1-202ENST00000378512 NRXN2Q9P2S2 1712 aa22.41■■□□□ 1.18
RER1-202ENST00000378512 SNRPA1P09661 255 aaKnown RBP22.4■■□□□ 1.18
RER1-202ENST00000378512 CCDC146Q8IYE0 955 aa22.4■■□□□ 1.18
RER1-202ENST00000378512 USP16Q9Y5T5 823 aa22.4■■□□□ 1.18
RER1-202ENST00000378512 BCORQ6W2J9 1755 aa22.4■■□□□ 1.18
RER1-202ENST00000378512 PRAMEF22A3QJZ6 481 aa22.4■■□□□ 1.18
RER1-202ENST00000378512 IL6STP40189 918 aaPredicted RBP22.4■■□□□ 1.18
RER1-202ENST00000378512 LMOD3Q0VAK6 560 aa22.4■■□□□ 1.18
RER1-202ENST00000378512 CCDC184Q52MB2 194 aa22.4■■□□□ 1.18
RER1-202ENST00000378512 MIS18AQ9NYP9 233 aa22.4■■□□□ 1.18
RER1-202ENST00000378512 ARFGEF1Q9Y6D6 1849 aa22.39■■□□□ 1.17
RER1-202ENST00000378512 BABAM1Q9NWV8 329 aa22.39■■□□□ 1.17
RER1-202ENST00000378512 PIM2Q9P1W9 311 aa22.39■■□□□ 1.17
RER1-202ENST00000378512 TRIM35Q9UPQ4 493 aa22.39■■□□□ 1.17
RER1-202ENST00000378512 CARMIL3Q8ND23 1372 aa22.38■■□□□ 1.17
RER1-202ENST00000378512 A1BGP04217 495 aa22.37■■□□□ 1.17
RER1-202ENST00000378512 EIF4A1P60842 406 aaKnown RBP22.37■■□□□ 1.17
RER1-202ENST00000378512 BICDL1Q6ZP65 573 aa22.37■■□□□ 1.17
RER1-202ENST00000378512 ZNF330Q9Y3S2 320 aaPredicted RBP22.37■■□□□ 1.17
RER1-202ENST00000378512 SERPINB2P05120 415 aa22.36■■□□□ 1.17
RER1-202ENST00000378512 PIP4K2AP48426 406 aaPredicted RBP22.36■■□□□ 1.17
RER1-202ENST00000378512 DALRD3Q5D0E6 543 aaKnown RBP22.36■■□□□ 1.17
RER1-202ENST00000378512 A0A087WZG4 1122 aa22.35■■□□□ 1.17
RER1-202ENST00000378512 ANP32CO43423 234 aa22.35■■□□□ 1.17
RER1-202ENST00000378512 TBC1D2BQ9UPU7 963 aa22.35■■□□□ 1.17
RER1-202ENST00000378512 RRP7AQ9Y3A4 280 aaKnown RBP22.35■■□□□ 1.17
RER1-202ENST00000378512 CEP350Q5VT06 3117 aa22.35■■□□□ 1.17
RER1-202ENST00000378512 KIF3CO14782 793 aa22.34■■□□□ 1.17
RER1-202ENST00000378512 TBC1D9BQ66K14 1250 aa22.34■■□□□ 1.17
RER1-202ENST00000378512 C9orf131Q5VYM1 1079 aa22.33■■□□□ 1.17
RER1-202ENST00000378512 CCDC24Q8N4L8 307 aa22.33■■□□□ 1.17
RER1-202ENST00000378512 NBPF26B4DH59 902 aa22.32■■□□□ 1.16
RER1-202ENST00000378512 NBPF10Q6P3W6 841 aaKnown RBP22.32■■□□□ 1.16
RER1-202ENST00000378512 NBPF15Q8N660 670 aa22.32■■□□□ 1.16
RER1-202ENST00000378512 NEUROD2Q15784 382 aa22.31■■□□□ 1.16
RER1-202ENST00000378512 CHL1O00533 1208 aa22.31■■□□□ 1.16
RER1-202ENST00000378512 TSPYL4Q9UJ04 414 aa22.31■■□□□ 1.16
RER1-202ENST00000378512 DLEC1Q9Y238 1755 aa22.3■■□□□ 1.16
RER1-202ENST00000378512 ANKRD31Q8N7Z5 1873 aa22.3■■□□□ 1.16
RER1-202ENST00000378512 APAF1O14727 1248 aa22.3■■□□□ 1.16
RER1-202ENST00000378512 NMRK2Q9NPI5 230 aa22.3■■□□□ 1.16
RER1-202ENST00000378512 RGL2O15211 777 aa22.29■■□□□ 1.16
RER1-202ENST00000378512 CAMTA2O94983 1202 aa22.29■■□□□ 1.16
RER1-202ENST00000378512 RASSF7Q02833 373 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms